def layout(node):
if node.is_leaf():
#######################################################
#~ Taxon Label Size and Margin Adjustment
N = AttrFace("name", fsize=1200, fgcolor="#000000")
N.margin_top = 250
N.margin_right = 100 #outside
N.margin_left = 1000 #inside
N.margin_bottom = 250
#######################################################
#######################################################
#~ Taxon Label Background Color Setting
tmp = "<myTaxaonLabel>"
#~ if not(node.name.find(tmp)) : N.background.color="#FF9999"
#######################################################
faces.add_face_to_node(N, node, 0, position="aligned")
if (not node.is_leaf()):
S = faces.AttrFace("support", fsize=200, fgcolor="#000000")
S.margin_top = 20
S.margin_right = 10
S.margin_left = 20
S.margin_bottom = 20
faces.add_face_to_node(S, node, column=0, position="float")
if "support" in node.features:
# Creates a sphere face whose size is proportional to node's
# feature "weight"
C = CircleFace(radius=node.support * 20,
color="RoyalBlue",
style="sphere")
# Let's make the sphere transparent
C.opacity = 0.3
# And place as a float face over the tree
faces.add_face_to_node(C, node, position="float", column=1)
style = NodeStyle()
style["size"] = 0
style["vt_line_width"] = 150
style["hz_line_width"] = 150
style["vt_line_type"] = 0 # 0 solid, 1 dashed, 2 dotted
style["hz_line_type"] = 0
node.set_style(style)
bgcol1 = "#FFCCCC"
bgcol2 = "#FFE5CC"
bgcol3 = "#FFFFCC"
bgcol4 = "#E5FFCC"
bgcol5 = "#CCFFCC"
bgcol6 = "#CCFFE5"
bgcol7 = "#FFCCE5"
bgcol8 = "#CCFFFF"
bgcol9 = "#CCE5FF"
bgcol10 = "#CCCCFF"
bgcol11 = "#E5CCFF"
def layout(node):
if node.is_leaf():
#######################################################
#~ Taxon Label Size and Margin Adjustment
N = AttrFace("name", fsize=1200,fgcolor="#000000")
N.margin_top = 250
N.margin_right = 100 #outside
N.margin_left = 1000 #inside
N.margin_bottom = 250
#######################################################
#######################################################
#~ Taxon Label Background Color Setting
tmp = "<myTaxaonLabel>"
#~ if not(node.name.find(tmp)) : N.background.color="#FF9999"
#######################################################
faces.add_face_to_node(N, node, 0, position="aligned")
if (not node.is_leaf()) :
S=faces.AttrFace("support", fsize=200, fgcolor="#000000")
S.margin_top = 20
S.margin_right = 10
S.margin_left = 20
S.margin_bottom = 20
faces.add_face_to_node( S, node, column=0 , position = "float")
if "support" in node.features:
# Creates a sphere face whose size is proportional to node's
# feature "weight"
C = CircleFace(radius=node.support*20, color="RoyalBlue", style="sphere")
# Let's make the sphere transparent
C.opacity = 0.3
# And place as a float face over the tree
faces.add_face_to_node(C, node, position="float",column=1)
style = NodeStyle()
style["size"] = 0
style["vt_line_width"] = 150
style["hz_line_width"] = 150
style["vt_line_type"] = 0 # 0 solid, 1 dashed, 2 dotted
style["hz_line_type"] = 0
node.set_style(style)
bgcol1="#FFCCCC"
bgcol2="#FFE5CC"
bgcol3="#FFFFCC"
bgcol4="#E5FFCC"
bgcol5="#CCFFCC"
bgcol6="#CCFFE5"
bgcol7="#FFCCE5"
bgcol8="#CCFFFF"
bgcol9="#CCE5FF"
bgcol10="#CCCCFF"
bgcol11="#E5CCFF"
def my_layout(node):
style2 = NodeStyle()
style2["fgcolor"] = "#000000"
style2["shape"] = "circle"
# style2["vt_line_color"] = "#0000aa"
# style2["hz_line_color"] = "#0000aa"
# style2["vt_line_width"] = 2
# style2["hz_line_width"] = 2
# style2["vt_line_type"] = 1 # 0 solid, 1 dashed, 2 dotted
# style2["hz_line_type"] = 1
node.img_style = style2
node.img_style["bgcolor"] = "LightSteelBlue"
if node.is_leaf():
# If terminal node, draws its name
# name_faces = AttrFace("name")
node.img_style["size"] = 40
# node.img_style["shape"] = "sphere"
node.img_style["fgcolor"] = "#FFFFFF"
# node.img_style["fgcolor"] = "#9db0cf"
# node.img_style["bgcolor"] = "#9db0cf"
# node.img_style["faces_bgcolor"] = "#9db0cf"
# node.img_style["bgcolor"] = "#9db0cf"
# node.img_style["bgcolor"] = "#9db0cf"
pass
else:
# If internal node, draws label with smaller font size
# name_faces = AttrFace("name", fsize=15)
# Adds the name face to the image at the preferred position
# faces.add_face_to_node(name_faces, node, column=0, position="branch-top")
# tempo = faces.ImgFace(plot_folder + "/" + node.name + '.jpg')
# faces.add_face_to_node(tempo, node, column=0, position="branch-bottom")
node.img_style["size"] = 40
node.img_style["shape"] = "sphere"
node.img_style["fgcolor"] = "#FFFFFF"
tempt = AttrFace('name', fsize=80)
tempt.fgcolor = "Black"
tempt.margin_top = 10
tempt.margin_right = 10
tempt.margin_left = 10
tempt.margin_bottom = 10
tempt.opacity = 0.5 # from 0 to 1
tempt.inner_border.width = 1 # 1 pixel border
tempt.inner_border.type = 1 # dashed line
tempt.border.width = 1
# tempt.background.color = "LightGreen"
# tempt.penwidth = 40
node.add_face(tempt, column=0, position="branch-top")
def my_layout(node):
style2 = NodeStyle()
style2["fgcolor"] = "#000000"
style2["shape"] = "circle"
node.img_style = style2
node.img_style["bgcolor"] = "LightSteelBlue"
if node.is_leaf():
node.img_style["size"] = 40
node.img_style["fgcolor"] = "#FFFFFF"
pass
else:
node.img_style["size"] = 40
node.img_style["shape"] = "sphere"
node.img_style["fgcolor"] = "#FFFFFF"
tempt = AttrFace('name', fsize=80)
tempt.fgcolor = "Black"
tempt.margin_top = 10
tempt.margin_right = 10
tempt.margin_left = 10
tempt.margin_bottom = 10
tempt.opacity = 0.5 # from 0 to 1
tempt.inner_border.width = 1 # 1 pixel border
tempt.inner_border.type = 1 # dashed line
tempt.border.width = 1
node.add_face(tempt, column=0, position="branch-top")
tempt = AttrFace('alias', fsize=80)
tempt.fgcolor = "Black"
tempt.margin_top = 10
tempt.margin_right = 10
tempt.margin_left = 10
tempt.margin_bottom = 10
tempt.opacity = 0.5 # from 0 to 1
tempt.inner_border.width = 1 # 1 pixel border
tempt.inner_border.type = 1 # dashed line
tempt.border.width = 1
node.add_face(tempt, column=0, position="branch-bottom")
