def save_model(path, model): """Save a full model in directory path (try to create if necessary).""" if not isinstance(model, base_objects.Model): raise ValueError("Object %s is not a valid Model" % repr(model)) if not isinstance(path, str): raise ValueError("Object %s is not a path string" % repr(path)) if not os.path.isdir(path): logger.warning("Path %s does not exist, try to make it..." % str(path)) try: os.mkdir(path) except IOError as xxx_todo_changeme: (errno, strerror) = xxx_todo_changeme.args logger.error("I/O error (%s): %s" % (errno, strerror)) return None print("Saving particles...", end=' ') files.write_to_file(os.path.join(path, 'particles.py'), save_particles, model['particles']) print("%i particles saved to %s" % (len(model['particles']), os.path.join(path, 'particles.py'))) print("Saving interactions...", end=' ') files.write_to_file(os.path.join(path, 'interactions.py'), save_interactions, model['interactions']) print("%i interactions saved to %s" % (len(model['interactions']), os.path.join(path, 'interactions.py')))
def save_to_file(filename, object): """Save any Python object to file filename""" if not isinstance(filename, str): raise SaveObjectError, "filename must be a string" files.write_to_file(filename, pickle_object, object) return True
else: fsock.write(str(inter)) fsock.write("]") def save_model(path, model): """Save a full model in directory path (try to create if necessary).""" if not isinstance(model, base_objects.Model): raise ValueError, "Object %s is not a valid Model" % repr(model) if not isinstance(path, str): raise ValueError, "Object %s is not a path string" % repr(path) if not os.path.isdir(path): logger.warning("Path %s does not exist, try to make it..." % str(path)) try: os.mkdir(path) except IOError, (errno, strerror): logger.error("I/O error (%s): %s" % (errno, strerror)) return None print "Saving particles...", files.write_to_file(os.path.join(path, "particles.py"), save_particles, model["particles"]) print "%i particles saved to %s" % (len(model["particles"]), os.path.join(path, "particles.py")) print "Saving interactions...", files.write_to_file(os.path.join(path, "interactions.py"), save_interactions, model["interactions"]) print "%i interactions saved to %s" % (len(model["interactions"]), os.path.join(path, "interactions.py"))
if not isinstance(model, base_objects.Model): raise ValueError, \ "Object %s is not a valid Model" % repr(model) if not isinstance(path, str): raise ValueError, \ "Object %s is not a path string" % repr(path) if not os.path.isdir(path): logger.warning("Path %s does not exist, try to make it..." % str(path)) try: os.mkdir(path) except IOError, (errno, strerror): logger.error("I/O error (%s): %s" % (errno, strerror)) return None print "Saving particles...", files.write_to_file(os.path.join(path, 'particles.py'), save_particles, model['particles']) print "%i particles saved to %s" % (len(model['particles']), os.path.join(path, 'particles.py')) print "Saving interactions...", files.write_to_file(os.path.join(path, 'interactions.py'), save_interactions, model['interactions']) print "%i interactions saved to %s" % (len(model['interactions']), os.path.join(path, 'interactions.py'))