Exemple #1
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def test_resample_100(nex2):
    nexus_obj = shufflenexus(nex2, 100)
    assert len(nexus_obj.characters) == 100
    assert sorted(nexus_obj.taxa) == \
        ['George', 'John', 'Paul', 'Ringo']
Exemple #2
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def test_output(nex2):
    nexus_obj = shufflenexus(nex2)
    assert isinstance(nexus_obj, NexusWriter)
Exemple #3
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def test_exception_resample_negativeinteger(nex2):
    with pytest.raises(ValueError):
        shufflenexus(nex2, -1)
Exemple #4
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def test_exception_resample_badinteger(nex2):
    with pytest.raises(ValueError):
        shufflenexus(nex2, 0)
Exemple #5
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 def test_resample_100(self):
     nexus_obj = shufflenexus(self.nexus_obj, 100)
     assert len(nexus_obj.characters) == 100
     assert sorted(nexus_obj.taxa) == \
         ['George', 'John', 'Paul', 'Ringo']
Exemple #6
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 def test_resample_1(self):
     nexus_obj = shufflenexus(self.nexus_obj, 1)
     assert len(nexus_obj.characters) == 1
     assert sorted(nexus_obj.taxa) == \
         ['George', 'John', 'Paul', 'Ringo']
Exemple #7
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 def test_output(self):
     nexus_obj = shufflenexus(self.nexus_obj)
     assert isinstance(nexus_obj, NexusWriter)