def buildSummaryMetadata(WorkingDir,importMicrographs,summaryFile,MDL_TYPE):
md = xmipp.MetaData()
importMd = xmipp.MetaData(importMicrographs)
importMd.removeDisabled()
for id in importMd:
inputFile = importMd.getValue(MDL_TYPE,id)
micrographName = os.path.basename(inputFile)
shortname = replaceFilenameExt(micrographName, '')
micrographDir = join(WorkingDir, 'extra', shortname)
objId = md.addObject()
md.setValue(MDL_TYPE, inputFile, objId)
ctfparam = _getFilename('ctfparam', micrographDir=micrographDir)
labels = [xmipp.MDL_PSD, xmipp.MDL_PSD_ENHANCED, xmipp.MDL_CTF_MODEL,xmipp.MDL_IMAGE1, xmipp.MDL_IMAGE2]
if exists(ctfparam): # Get filenames
keys = ['psd', 'enhanced_psd', 'ctfparam', 'ctfmodel_quadrant', 'ctfmodel_halfplane']
values = [_getFilename(key, micrographDir=micrographDir) for key in keys]
else: # No files
values = ['NA'] * len(labels)
# Set values in metadata
for label, value in zip(labels, values):
md.setValue(label, value, objId)
if not md.isEmpty():
md.sort(MDL_TYPE)
md.write(summaryFile)
