Python all_unambiguous Exemples

Exemple #1

Fichier : test_subcommands_quality_filter.py Projet : yimsea/seqmagick

 def test_four_nt(self):
     self.assertEqual(set(['ACCG', 'ACCA']),
                      set(quality_filter.all_unambiguous('ACCR')))
     self.assertEqual(4**4, len(quality_filter.all_unambiguous('NNNN')))

Exemple #2

Fichier : test_subcommands_quality_filter.py Projet : apurvaraman/seqmagick

 def test_four_nt(self):
     self.assertEqual(set(['ACCG', 'ACCA']),
                      set(quality_filter.all_unambiguous('ACCR')))
     self.assertEqual(4**4, len(quality_filter.all_unambiguous('NNNN')))

Exemple #3

Fichier : test_subcommands_quality_filter.py Projet : yimsea/seqmagick

 def test_one_nt(self):
     self.assertEqual(set('ACGT'), set(quality_filter.all_unambiguous('N')))

Exemple #4

Fichier : test_subcommands_quality_filter.py Projet : apurvaraman/seqmagick

 def test_one_nt(self):
     self.assertEqual(set('ACGT'), set(quality_filter.all_unambiguous('N')))