Exemple #1
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 def test_negatives(self):
     for fp in self.negatives:
         self.assertEqual(_fastq_sniffer(fp), (False, {}))
Exemple #2
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 def test_positives(self):
     for fp in self.positives:
         self.assertEqual(_fastq_sniffer(fp), (True, {}))
Exemple #3
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 def test_negatives(self):
     for fp in self.negatives:
         self.assertEqual(_fastq_sniffer(fp), (False, {}))
Exemple #4
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 def test_illumina_sniffed(self):
     fp = get_data_path('fastq_single_seq_illumina1.8')
     self.assertEqual(_fastq_sniffer(fp), (True, {'variant':
                                                  'illumina1.8'}))
Exemple #5
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 def test_positives(self):
     for fp in self.positives:
         self.assertEqual(_fastq_sniffer(fp), (True, {}))