def testing(G_fn, dataDir): mad = getMaxAveDegree(G_fn) ss1_fn, deg_fn, numNodes = calcScanStat_Degree(G_fn) tri_fn = eignTriangleLocal(G_fn)[0] ccArr_fn = calcLocalClustCoeff(deg_fn, tri_fn, test=True) testObj = unittesting.test(G_fn, dataDir, numNodes, ss1_fn = ss1_fn, deg_fn = deg_fn, tri_fn = tri_fn, ccArr_fn = ccArr_fn, mad = mad) # Create unittest object testObj.testClustCoeff() testObj.testDegree() testObj.testTriangles() testObj.testMAD() testObj.testSS1()
def testing(G_fn, dataDir):
mad = getMaxAveDegree(G_fn)
ss1_fn, deg_fn, numNodes = calcScanStat_Degree(G_fn)
tri_fn = eignTriangleLocal(G_fn)[0]
ccArr_fn = calcLocalClustCoeff(deg_fn, tri_fn, test=True)
testObj = unittesting.test(G_fn,
dataDir,
numNodes,
ss1_fn=ss1_fn,
deg_fn=deg_fn,
tri_fn=tri_fn,
ccArr_fn=ccArr_fn,
mad=mad) # Create unittest object
testObj.testClustCoeff()
testObj.testDegree()
testObj.testTriangles()
testObj.testMAD()
testObj.testSS1()
def triangleDegrade(G_fn, dataDir):
if not os.path.exists(dataDir):
try:
os.makedirs(dataDir)
except:
print "Absolute file path failed: %s" % dataDir
try:
os.makedirs(os.path.abspath(dataDir))
except:
print "Relative file path creation failed: %s" % dataDir
sys.exit(-1)
try:
G = sio.loadmat(G_fn)['fibergraph']
except:
print "%s File not found" % G_fn
sys.exit(-1)
numNodes = G.shape[0]
numEdges = G.nnz
maxEigs = numNodes - 2
x = range(1,10)
x.reverse()
numEigsArray = np.append(maxEigs/np.array(range(1,30)),x)
percDiffArray = []
timeArray = []
for k in numEigsArray:
tri_fn, tm = eignTriangleLocal(G_fn, G , lcc_fn = None, triDir = dataDir, k = k, degradeTest = True)
timeArray.append(tm)
percDiffArray.append(testTriangles( dataDir, k, tri_fn, numNodes, 0.1))
np.save("bench/3000/percDiffArray.npy", np.array(percDiffArray))
np.save("bench/3000/timeArray.npy", np.array(timeArray))
print "***Triangle eignvalue number degradation complete..."
graphDegrade(percDiffArray, timeArray, dataDir, numEigsArray, numNodes, numEdges)
