def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = data_collection.acquisitions[
0].path_template
self._acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self._acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self._data_path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self._processing_widget.update_data_model(data_collection.\
processing_parameters)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def __init__(self,
parent=None,
name='',
fl=0,
data_model=None,
layout=None):
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._base_image_dir = None
self._base_process_dir = None
self.path_conflict_state = False
if data_model is None:
self._data_model = queue_model_objects.PathTemplate()
else:
self._data_model = data_model
self._data_model_pm = DataModelInputBinder(self._data_model)
# Graphic elements ----------------------------------------------------
if layout == "vertical":
self.data_path_layout = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_vertical_layout.ui"))
else:
self.data_path_layout = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_horizontal_layout.ui"))
# Layout --------------------------------------------------------------
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.data_path_layout)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
# Qt signal/slot connections ------------------------------------------
self.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self.data_path_layout.browse_button.clicked.connect(
self._browse_clicked)
self.data_path_layout.folder_ledit.textChanged.connect(
self._folder_ledit_change)
# Other ---------------------------------------------------------------
self._data_model_pm.bind_value_update(
'base_prefix', self.data_path_layout.prefix_ledit, str, None)
self._data_model_pm.bind_value_update(
'run_number', self.data_path_layout.run_number_ledit, int,
QtGui.QIntValidator(0, 1000, self))
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
if isinstance(tree_view_item, Qt4_queue_item.XrayCenteringQueueItem):
self._data_collection = tree_view_item.get_model().reference_image_collection
else:
self._data_collection = tree_view_item.get_model()
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def __init__(self, parent=None, name=None, fl=0, data_model=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.processing_widget.space_group_combo.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.a_ledit,
float, None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.alpha_ledit,
float, None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.b_ledit,
float, None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.beta_ledit,
float, None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.c_ledit,
float, None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.gamma_ledit,
float, None)
self._model_mib.bind_value_update(
'num_residues', self.processing_widget.num_residues_ledit, float,
None)
self.processing_widget.space_group_combo.activated.\
connect(self._space_group_change)
self.processing_widget.run_processing_after_cbox.stateChanged.\
connect(self._run_processing_after_toggled)
self.processing_widget.run_processing_parallel_cbox.stateChanged.\
connect(self._run_processing_parallel_toggled)
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = None):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_simple_layout.ui"))
# Layout --------------------------------------------------------------
main_layout = QtGui.QVBoxLayout(self)
main_layout.addWidget(self.acq_widget)
main_layout.setSpacing(0)
main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(main_layout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget.num_images_cbox.activated.connect(self.update_num_images)
self.acq_widget.detector_mode_combo.activated.connect(self.detector_mode_changed)
self.acq_widget.osc_start_cbox.toggled.connect(self.osc_start_cbox_click)
# Other ---------------------------------------------------------------
self.energy_validator = QtGui.QDoubleValidator(0, 25, 5, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0, 10000, 5, self)
self.acq_widget.osc_start_ledit.setEnabled(False)
self.acq_widget.kappa_ledit.setEnabled(False)
self.acq_widget.kappa_phi_ledit.setEnabled(False)
self.acq_widget.num_images_cbox.setCurrentIndex(1)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = data_collection.acquisitions[0].path_template
self._acq_widget.set_energies(data_collection.crystal.energy_scan_result)
self._acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self._data_path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self._processing_widget.update_data_model(data_collection.\
processing_parameters)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
self._data_collection = tree_view_item.get_model().reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent=None, name='gphl_setup_widget'):
QtGui.QWidget.__init__(self,parent)
if name is not None:
self.setObjectName(name)
# Properties ----------------------------------------------------------
# Signals ------------------------------------------------------------
# Slots ---------------------------------------------------------------
dispatcher.connect(self._refresh_interface, 'model_update',
dispatcher.Any)
# Hardware objects ----------------------------------------------------
# Internal variables -------------------------------------------------
self._widget_data = OrderedDict()
self._data_object = GphlAcquisitionData()
self._pulldowns = {}
self._parameter_mib = DataModelInputBinder(self._data_object)
# Graphic elements ----------------------------------------------------
_parameters_widget = self._parameters_widget = QtGui.QWidget(self)
QtGui.QGridLayout(_parameters_widget)
_parameters_widget.layout().setColumnStretch(2, 1)
# Layout --------------------------------------------------------------
# This seems to be necessary to make widget visible
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(_parameters_widget)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
def __init__(self, parent=None, name=None, fl=0, xray_imaging_params=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if xray_imaging_params is None:
self._xray_imaging_parameters = \
queue_model_objects.XrayImagingParameters()
else:
self._xray_imaging_parameters = xray_imaging_params
self._xray_imaging_mib = DataModelInputBinder(self._xray_imaging_parameters)
self._parameters_widget = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_xray_imaging_parameters_widget_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self._parameters_widget)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
def populate_widget(self, beam_energies={}, **kw):
data_object = self._data_object = GphlAcquisitionData()
parameter_mib = self._parameter_mib = DataModelInputBinder(data_object)
widget_data = self._widget_data
skip_fields = []
for tag in self.beam_energy_tags[len(beam_energies):]:
skip_fields.append(tag)
skip_fields.append(self._get_label_name(tag))
if not beam_energies:
skip_fields.append('beam_energies_label')
for tag, tt in widget_data.items():
if tag in skip_fields:
tt[0].hide()
else:
widget, w_type, validator, value = tt
widget.show()
if tag in kw:
value = kw[tag]
elif tag in self.beam_energy_tags:
ii = self.beam_energy_tags.index(tag)
if ii < len(beam_energies):
name = list(beam_energies)[ii]
value = beam_energies[name]
label_tag = self._get_label_name(tag)
setattr(data_object, label_tag, name)
setattr(data_object, tag, value)
parameter_mib.bind_value_update(tag, widget, w_type, validator)
parameter_mib.init_bindings()
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self.path_widget._data_model = data_collection.acquisitions[
0].path_template
self.acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self.acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self.acq_widget.use_osc_start(True)
self.path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self.processing_widget.update_data_model(data_collection.\
processing_parameters)
if data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent = None, name = '', fl = 0, data_model = None,
layout = None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._base_image_dir = None
self._base_process_dir = None
self.path_conflict_state = False
self.enable_macros = False
if data_model is None:
self._data_model = queue_model_objects.PathTemplate()
else:
self._data_model = data_model
self._data_model_pm = DataModelInputBinder(self._data_model)
# Graphic elements ----------------------------------------------------
if layout == "vertical":
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_vertical_layout.ui"))
else:
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_horizontal_layout.ui"))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self.data_path_layout)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
# Qt signal/slot connections ------------------------------------------
self.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.data_path_layout.browse_button.clicked.\
connect(self._browse_clicked)
self.data_path_layout.folder_ledit.textChanged.\
connect(self._folder_ledit_change)
self.data_path_layout.compression_cbox.toggled.\
connect(self._compression_toggled)
# Other ---------------------------------------------------------------
self._data_model_pm.bind_value_update('base_prefix',
self.data_path_layout.prefix_ledit, str, None)
self._data_model_pm.bind_value_update('run_number',
self.data_path_layout.run_number_ledit,
int, QIntValidator(0, 1000, self))
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
advanced_model = tree_view_item.get_model()
self._data_collection = advanced_model.reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
image = advanced_model.grid_object.get_snapshot()
try:
image = image.scaled(427, 320, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
except:
pass
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent=None, name=None, fl=0, xray_imaging_params=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if xray_imaging_params is None:
self._xray_imaging_parameters = \
queue_model_objects.XrayImagingParameters()
else:
self._xray_imaging_parameters = xray_imaging_params
self._xray_imaging_mib = DataModelInputBinder(
self._xray_imaging_parameters)
self._parameters_widget = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_xray_imaging_parameters_widget_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self._parameters_widget)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self.path_widget._data_model = data_collection.acquisitions[0].path_template
self.acq_widget.set_energies(data_collection.crystal.energy_scan_result)
self.acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self.acq_widget.use_osc_start(True)
self.path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self.processing_widget.update_data_model(data_collection.\
processing_parameters)
if data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
advanced_model = tree_view_item.get_model()
self._data_collection = advanced_model.reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
image = advanced_model.grid_object.get_snapshot()
try:
image = image.scaled(427, 320, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
except:
pass
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
class CharParametersWidget(QtGui.QWidget):
"""
Descript. :
"""
def __init__(self, parent = None, name = "parameter_widget"):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._char = None
self._char_params = queue_model_objects.CharacterisationParameters()
self._char_params_mib = DataModelInputBinder(self._char_params)
self._tree_view_item = None
self.previous_energy = None
self.add_dc_cb = None
# Graphic elements ----------------------------------------------------
rone_widget = QtGui.QWidget(self)
self.reference_img_widget = ReferenceImageWidget(rone_widget)
self.acq_widget = self.reference_img_widget.acq_widget
self.path_widget = self.reference_img_widget.path_widget
self.position_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
self.position_widget.setMinimumSize(450, 340)
rtwo_widget = QtGui.QWidget(self)
self.char_type_widget = CharTypeWidget(rtwo_widget)
self.routine_dc_widget = self.char_type_widget.routine_dc_page
self.sad_widget = self.char_type_widget.sad_page
self.rad_dmg_char_widget = self.char_type_widget.rad_damage_page
self.opt_parameters_widget = OptimisationParametersWidgetLayout(self)
rtree_widget = QtGui.QWidget(self)
self.rad_dmg_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_radiation_damage_model_widget_layout.ui'))
self.vertical_dimension_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
# Layout --------------------------------------------------------------
rone_widget_layout = QtGui.QHBoxLayout(self)
rone_widget_layout.addWidget(self.reference_img_widget)
rone_widget_layout.addWidget(self.position_widget)
#rone_widget_layout.addStretch(0)
rone_widget_layout.setSpacing(2)
rone_widget_layout.setContentsMargins(0, 0, 0, 0)
rone_widget.setLayout(rone_widget_layout)
rtwo_widget_layout = QtGui.QHBoxLayout(self)
rtwo_widget_layout.addWidget(self.char_type_widget)
rtwo_widget_layout.addWidget(self.opt_parameters_widget)
rtwo_widget_layout.addStretch(0)
rtwo_widget_layout.setSpacing(2)
rtwo_widget_layout.setContentsMargins(0, 0, 0, 0)
rtwo_widget.setLayout(rtwo_widget_layout)
rtree_widget_layout = QtGui.QHBoxLayout(self)
rtree_widget_layout.addWidget(self.rad_dmg_widget)
rtree_widget_layout.addWidget(self.vertical_dimension_widget)
rtree_widget_layout.addStretch(0)
rtree_widget_layout.setSpacing(2)
rtree_widget_layout.setContentsMargins(0, 0, 0, 0)
rtree_widget.setLayout(rtree_widget_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(rone_widget)
_main_vlayout.addWidget(rtwo_widget)
_main_vlayout.addWidget(rtree_widget)
_main_vlayout.setSpacing(2)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies -------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.toggle_permitted_range(self.opt_parameters_widget.\
opt_param_widget.permitted_range_cbx.isChecked())
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx.\
toggled.connect(self.toggle_permitted_range)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update('min_dose',
self.routine_dc_widget.dose_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_time',
self.routine_dc_widget.time_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('use_min_dose',
self.routine_dc_widget.min_dose_radio,
bool,
None)
self._char_params_mib.bind_value_update('use_min_time',
self.routine_dc_widget.min_time_radio,
bool,
None)
self._char_params_mib.bind_value_update('account_rad_damage',
self.routine_dc_widget.radiation_damage_cbx,
bool,
None)
self._char_params_mib.bind_value_update('auto_res',
self.sad_widget.automatic_resolution_radio,
bool,
None)
self._char_params_mib.bind_value_update('sad_res',
self.sad_widget.sad_resolution_ledit,
float,
QtGui.QDoubleValidator(0.5, 20, 3, self))
self._char_params_mib.bind_value_update('opt_sad',
self.sad_widget.optimised_sad_cbx,
bool,
None)
self._char_params_mib.bind_value_update('determine_rad_params',
self.rad_dmg_char_widget.rad_damage_cbx,
bool,
None)
self._char_params_mib.bind_value_update('burn_osc_start',
self.rad_dmg_char_widget.burn_osc_start_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('burn_osc_interval',
self.rad_dmg_char_widget.burn_osc_interval_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'use_aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(\
'aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_i_sigma',
self.opt_parameters_widget.opt_param_widget.i_over_sigma_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_completness',
self.opt_parameters_widget.opt_param_widget.aimed_comp_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'strategy_complexity',
self.opt_parameters_widget.opt_param_widget.start_comp_cbox,
int,
None)
self._char_params_mib.bind_value_update(
'use_permitted_rotation',
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'permitted_phi_start',
self.opt_parameters_widget.opt_param_widget.phi_start_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'permitted_phi_end',
self.opt_parameters_widget.opt_param_widget.phi_end_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'low_res_pass_strat',
self.opt_parameters_widget.opt_param_widget.low_res_pass_cbx,
bool,
None)
self._char_params_mib.bind_value_update('rad_suscept',
self.rad_dmg_widget.sensetivity_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('beta',
self.rad_dmg_widget.beta_over_gray_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('gamma',
self.rad_dmg_widget.gamma_over_gray_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('max_crystal_vdim',
self.vertical_dimension_widget.max_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_crystal_vdim',
self.vertical_dimension_widget.min_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_crystal_vphi',
self.vertical_dimension_widget.min_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('max_crystal_vphi',
self.vertical_dimension_widget.max_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
#self._char_params_mib.bind_value_update('space_group',
# self.vertical_dimension_widget.space_group_ledit,
# str,
# None)
self.vertical_dimension_widget.space_group_ledit.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self.char_type_widget.charact_type_tbox.currentChanged.connect(\
self.update_char_type)
self.rad_dmg_char_widget.rad_damage_cbx.toggled.connect(\
self.enable_opt_parameters_widget)
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx.\
toggled.connect(self.enable_maximum_res_ledit)
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx.\
toggled.connect(self.enable_aimed_mult_ledit)
self.path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#QtCore.QObject.connect(QtGui.QApplication, QtCore.SIGNAL('tab_changed'),
# self.tab_changed)
def _space_group_change(self, index):
"""
Descript. :
"""
self._char_params.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
"""
Descript. :
"""
index = 0
if space_group in queue_model_enumerables.XTAL_SPACEGROUPS:
index = queue_model_enumerables.XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self.vertical_dimension_widget.space_group_ledit.setCurrentIndex(index)
def _prefix_ledit_change(self, new_value):
"""
Descript. :
"""
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._char.set_name(prefix)
self._tree_view_item.setText(0, self._char.get_name())
def _run_number_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._char.set_number(int(new_value))
self._tree_view_item.setText(0, self._char.get_name())
def enable_aimed_mult_ledit(self, state):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit.setEnabled(state)
def enable_maximum_res_ledit(self, state):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit.setEnabled(state)
def update_char_type(self, index):
"""
Descript. :
"""
self._char_params.experiment_type = index
def toggle_permitted_range(self, status):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.phi_start_ledit.setEnabled(status)
self.opt_parameters_widget.opt_param_widget.phi_end_ledit.setEnabled(status)
def enable_opt_parameters_widget(self, state):
"""
Descript. :
"""
if not self._char.is_executed():
self.opt_parameters_widget.setEnabled(not state)
else:
self.opt_parameters_widget.setEnabled(False)
def tab_changed(self):
"""
Descript. :
"""
if self._tree_view_item:
self.populate_parameter_widget(self._tree_view_item)
def set_enabled(self, state):
"""
Descript. :
"""
self.char_type_widget.setEnabled(state)
self.routine_dc_widget.setEnabled(state)
self.sad_widget.setEnabled(state)
self.rad_dmg_char_widget.setEnabled(state)
self.reference_img_widget.setEnabled(state)
self.acq_widget.setEnabled(state)
self.path_widget.setEnabled(state)
self.opt_parameters_widget.setEnabled(state)
self.rad_dmg_widget.setEnabled(state)
self.vertical_dimension_widget.setEnabled(state)
def populate_parameter_widget(self, tree_view_item):
"""
Descript. :
"""
self._tree_view_item = tree_view_item
self._char = tree_view_item.get_model()
self._data_collection = self._char.reference_image_collection
self._char_params = self._char.characterisation_parameters
self._char_params_mib.set_model(self._char.characterisation_parameters)
self._set_space_group(self._char_params.space_group)
self.acq_widget.update_data_model(self._char.reference_image_collection.\
acquisitions[0].acquisition_parameters,
self._char.reference_image_collection.\
acquisitions[0].path_template)
self.path_widget.update_data_model(self._char.reference_image_collection.\
acquisitions[0].path_template)
if self._data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = self._data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
self.toggle_permitted_range(self._char_params.use_permitted_rotation)
self.enable_opt_parameters_widget(self._char_params.determine_rad_params)
self.enable_maximum_res_ledit(self._char_params.use_aimed_resolution)
self.enable_aimed_mult_ledit(self._char_params.use_aimed_multiplicity)
item = self.char_type_widget.charact_type_tbox.\
widget(self._char_params.experiment_type)
self.char_type_widget.charact_type_tbox.setCurrentWidget(item)
self.char_type_widget.toggle_time_dose()
crystal = self._char.reference_image_collection.crystal
self.acq_widget.set_energies(crystal.energy_scan_result)
def set_beamline_setup(self, bl_setup):
"""
Descript. :
"""
self.acq_widget.set_beamline_setup(bl_setup)
class XrayImagingParametersWidget(QWidget):
def __init__(self, parent=None, name=None, fl=0, xray_imaging_params=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if xray_imaging_params is None:
self._xray_imaging_parameters = \
queue_model_objects.XrayImagingParameters()
else:
self._xray_imaging_parameters = xray_imaging_params
self._xray_imaging_mib = DataModelInputBinder(self._xray_imaging_parameters)
self._parameters_widget = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_xray_imaging_parameters_widget_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self._parameters_widget)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
def set_beamline_setup(self, beamline_setup):
"""Sets beamline setup and links qt gui with data model
"""
self._beamline_setup_hwobj = beamline_setup
self._xray_imaging_mib.\
bind_value_update('camera_hw_binning',
self._parameters_widget.camera_hw_binning_combo,
int,
None)
self._xray_imaging_mib.\
bind_value_update('camera_hw_roi',
self._parameters_widget.camera_hw_roi_combo,
int,
None)
self._xray_imaging_mib.\
bind_value_update('store_data',
self._parameters_widget.store_data_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('live_display',
self._parameters_widget.live_display_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('pre_flat_field_frames',
self._parameters_widget.pre_flat_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('post_flat_field_frames',
self._parameters_widget.post_flat_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('apply_pre_flat_field_frames',
self._parameters_widget.apply_flat_cbox,
bool,
None)
def update_data_model(self, xray_imaging_parameters):
"""
Descript. :
"""
self._xray_imaging_parameters = xray_imaging_parameters
self._xray_imaging_mib.set_model(xray_imaging_parameters)
class DataPathWidget(QWidget):
pathTemplateChangedSignal = pyqtSignal()
def __init__(self, parent = None, name = '', fl = 0, data_model = None,
layout = None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._base_image_dir = None
self._base_process_dir = None
self.path_conflict_state = False
self.enable_macros = False
if data_model is None:
self._data_model = queue_model_objects.PathTemplate()
else:
self._data_model = data_model
self._data_model_pm = DataModelInputBinder(self._data_model)
# Graphic elements ----------------------------------------------------
if layout == "vertical":
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_vertical_layout.ui"))
else:
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_horizontal_layout.ui"))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self.data_path_layout)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
# Qt signal/slot connections ------------------------------------------
self.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.data_path_layout.browse_button.clicked.\
connect(self._browse_clicked)
self.data_path_layout.folder_ledit.textChanged.\
connect(self._folder_ledit_change)
self.data_path_layout.compression_cbox.toggled.\
connect(self._compression_toggled)
# Other ---------------------------------------------------------------
self._data_model_pm.bind_value_update('base_prefix',
self.data_path_layout.prefix_ledit, str, None)
self._data_model_pm.bind_value_update('run_number',
self.data_path_layout.run_number_ledit,
int, QIntValidator(0, 1000, self))
#self._data_model_pm.bind_value_update('compression',
# self.data_path_layout.compression_cbox, bool, None)
def _browse_clicked(self):
"""
Descript. :
"""
file_dialog = QFileDialog(self)
file_dialog.setNameFilter("%s*" % self._base_image_dir)
selected_dir = str(file_dialog.getExistingDirectory(\
self, "Select a directory", self._base_image_dir))
selecte_dir = os.path.dirname(selected_dir)
if selected_dir is not None and len(selected_dir) > 0:
self.set_directory(selected_dir)
def _prefix_ledit_change(self, new_value):
"""
Descript. :
"""
cursor_pos = self.data_path_layout.prefix_ledit.cursorPosition()
if len(new_value) > 0:
available_chars = string.ascii_lowercase + string.ascii_uppercase + \
string.digits + "-_"
if self.enable_macros:
available_chars += "%"
new_value = ''.join(i for i in str(new_value) if i in available_chars)
if len(new_value) > 50:
logging.getLogger("GUI").\
error("Current prefix is to long (max 50 characters are allowed)")
new_value = new_value[:-1]
self.data_path_layout.prefix_ledit.setText(new_value)
self.data_path_layout.prefix_ledit.setCursorPosition(cursor_pos)
self._data_model.base_prefix = str(new_value)
self.update_file_name()
self.pathTemplateChangedSignal.emit()
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_model.run_number = int(new_value)
self.data_path_layout.run_number_ledit.setText(str(new_value))
self.update_file_name()
self.pathTemplateChangedSignal.emit()
else:
self.data_path_layout.run_number_ledit.setText(str(self._data_model.run_number))
Qt4_widget_colors.set_widget_color(self.data_path_layout.folder_ledit,
Qt4_widget_colors.LIGHT_YELLOW)
def _folder_ledit_change(self, new_value):
"""
Descript. :
"""
base_image_dir = self._base_image_dir
base_proc_dir = self._base_process_dir
new_sub_dir = str(new_value).strip(' ')
cursor_pos = self.data_path_layout.folder_ledit.cursorPosition()
if len(new_value) > 0:
available_chars = string.ascii_lowercase + string.ascii_uppercase + \
string.digits + "-_/"
if self.enable_macros:
available_chars += "%"
new_value = ''.join(i for i in str(new_value) if i in available_chars)
self.data_path_layout.folder_ledit.setText(new_value)
self.data_path_layout.folder_ledit.setCursorPosition(cursor_pos)
if len(new_sub_dir) > 0:
if new_sub_dir[0] == os.path.sep:
new_sub_dir = new_sub_dir[1:]
new_image_directory = os.path.join(base_image_dir, str(new_sub_dir))
new_proc_dir = os.path.join(base_proc_dir, str(new_sub_dir))
else:
new_image_directory = base_image_dir
new_proc_dir = base_proc_dir
self._data_model.directory = new_image_directory
self._data_model.process_directory = new_proc_dir
Qt4_widget_colors.set_widget_color(self.data_path_layout.folder_ledit,
Qt4_widget_colors.WHITE)
self.pathTemplateChangedSignal.emit()
def _compression_toggled(self, state):
self._data_model.compression = state
self.update_file_name()
self.pathTemplateChangedSignal.emit()
def update_file_name(self):
"""
Descript. : updates filename if prefix or run number changed
at start values are initalized before precision is set.
so a check for isdigit is done to be on the safe side
"""
if str(self._data_model.precision).isdigit():
file_name = self._data_model.get_image_file_name()
file_name = file_name.replace('%' + str(self._data_model.precision) + 'd',
int(self._data_model.precision) * '#' )
file_name = file_name.strip(' ')
self.data_path_layout.file_name_value_label.setText(file_name)
def set_data_path(self, path):
"""
Descript. :
"""
(dir_name, file_name) = os.path.split(path)
self.set_directory(dir_name)
file_name = file_name.replace('%' + str(self._data_model.precision) + 'd',
int(self._data_model.precision) * '#' )
self.data_path_layout.file_name_value_label.setText(file_name)
def set_directory(self, directory):
"""
Descript. :
"""
base_image_dir = self._base_image_dir
dir_parts = directory.split(base_image_dir)
if len(dir_parts) > 1:
sub_dir = dir_parts[1]
self._data_model.directory = directory
self.data_path_layout.folder_ledit.setText(sub_dir)
else:
self.data_path_layout.folder_ledit.setText('')
self._data_model.directory = base_image_dir
self.data_path_layout.base_path_ledit.setText(base_image_dir)
def set_run_number(self, run_number):
"""
Descript. :
"""
self._data_model.run_number = int(run_number)
self.data_path_layout.run_number_ledit.setText(str(run_number))
def set_prefix(self, base_prefix):
"""
Descript. :
"""
self._data_model.base_prefix = str(base_prefix)
self.data_path_layout.prefix_ledit.setText(str(base_prefix))
file_name = self._data_model.get_image_file_name()
file_name = file_name.replace('%' + str(self._data_model.precision) + 'd',
int(self._data_model.precision) * '#' )
self.data_path_layout.file_name_value_label.setText(file_name)
def update_data_model(self, data_model):
"""
Descript. :
"""
self._data_model = data_model
self.set_data_path(data_model.get_image_path())
self._data_model_pm.set_model(data_model)
def indicate_path_conflict(self, conflict):
"""
Descript. :
"""
if conflict:
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.prefix_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.run_number_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.folder_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
logging.getLogger("GUI").\
error('The current path settings will overwrite data ' + \
'from another task. Correct the problem before ' + \
'adding to queue')
else:
# We had a conflict previous, but its corrected now !
if self.path_conflict_state:
logging.getLogger("GUI").info('Path valid')
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.prefix_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.run_number_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.folder_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
self.path_conflict_state = conflict
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = 'horizontal'):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
self.enable_parameter_update = True
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = uic.loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
else:
self.acq_widget_layout = uic.loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QtGui.QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.inverse_beam_cbx.toggled.connect(\
self.set_use_inverse_beam)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
overlap_ledit = self.acq_widget_layout.findChild(\
QtGui.QLineEdit, "overlap_ledit")
if overlap_ledit is not None:
overlap_ledit.textChanged.connect(self.overlap_changed)
self.acq_widget_layout.subwedge_size_ledit.textChanged.connect(\
self.subwedge_size_ledit_change)
# Other ---------------------------------------------------------------
self.acq_widget_layout.subwedge_size_ledit.setDisabled(True)
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 4, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0.0001, 10000, 4, self)
self.first_img_validator = QtGui.QIntValidator(0, 99999, self)
self.num_img_validator = QtGui.QIntValidator(1, 99999, self)
self.disable_inverse_beam(True)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
class GphlSetupWidget(QtGui.QWidget):
"""Superclass for GPhL interface widgets"""
def __init__(self, parent=None, name='gphl_setup_widget'):
QtGui.QWidget.__init__(self,parent)
if name is not None:
self.setObjectName(name)
# Properties ----------------------------------------------------------
# Signals ------------------------------------------------------------
# Slots ---------------------------------------------------------------
dispatcher.connect(self._refresh_interface, 'model_update',
dispatcher.Any)
# Hardware objects ----------------------------------------------------
# Internal variables -------------------------------------------------
self._widget_data = OrderedDict()
self._data_object = GphlAcquisitionData()
self._pulldowns = {}
self._parameter_mib = DataModelInputBinder(self._data_object)
# Graphic elements ----------------------------------------------------
_parameters_widget = self._parameters_widget = QtGui.QWidget(self)
QtGui.QGridLayout(_parameters_widget)
_parameters_widget.layout().setColumnStretch(2, 1)
# Layout --------------------------------------------------------------
# This seems to be necessary to make widget visible
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(_parameters_widget)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
def setEnabled(self, value):
super(GphlSetupWidget, self).setEnabled(value)
for tag in self._widget_data:
self.set_parameter_enabled(tag, value, warn=False)
def set_parameter_enabled(self, tag, value, warn=True):
tt = self._widget_data.get(tag)
if tt:
if hasattr(tt[0], 'setEnabled'):
tt[0].setEnabled(value)
elif warn:
logging.getLogger().warning(
"%s Widget has no attribute setEnabled" % tag
)
elif warn:
logging.getLogger().warning(
"%s field not found in GphlSetupWidget" % tag
)
def get_data_object(self):
return self._data_object
def populate_widget(self, **kw):
self._data_object = data_object = GphlAcquisitionData()
self._parameter_mib.bindings.clear()
# NB must be done here to set empty model, and also in subclasses:
self._parameter_mib.set_model(data_object)
for field_name, tags in self._pulldowns.items():
widget = self._widget_data[field_name][0]
widget.clear()
widget.addItems(list(QtCore.QString(tag) for tag in tags))
widget.setCurrentIndex(0)
def set_parameter_value(self, name, value):
"""Set value - NB ComboBoxes are set by text, not index"""
if hasattr(self._data_object, name):
tags = self._pulldowns.get(name)
if tags is None:
# Not a pulldown
setattr(self._data_object, name, value)
else:
# This is a pulldown
if value in tags:
indx = tags.index(value)
setattr(self._data_object, name, indx)
else:
raise ValueError(
"GPhL acquisition widget %s pulldown has no value %s"
% (name, value)
)
self._parameter_mib._update_widget(name, None)
else:
raise ValueError(
"GPhL acquisition widget has no parameter named %s" % name
)
def get_parameter_value(self, name):
"""Return value of parameter <name> or None if it does not exist
NB ComboBoxes return text values, not indices
NB, the attributes defined on the _data_object depend on context,
so it is practical not to get errors for unknown names """
if hasattr(self._data_object, name):
tags = self._pulldowns.get(name)
if tags is None:
# Not a pulldown
return getattr(self._data_object, name)
else:
# This is a pulldown - get text from index
return tags[getattr(self._data_object, name)]
else:
return None
def _get_label_name(self, name):
return name + '_label'
def _refresh_interface(self, field_name, data_binder):
"""Refresh interface when values change"""
pass
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_widget = DataPathWidget(self,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(2, 2, 2, 2)
_main_vlayout.setSpacing(6)
_main_vlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.\
connect(self.path_template_changed)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(\
self.characterisation_gbox_toggled)
self._char_widget.wait_result_cbx.toggled.connect(\
self.wait_results_cbx_toggled)
self._char_widget.execute_plan_cbx.toggled.connect(\
self.run_diffraction_plan_cbx_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
def __init__(self, parent=None, name=None, fl=0, data_model=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.processing_widget.space_group_combo.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.a_ledit,
float,
None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.alpha_ledit,
float,
None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.b_ledit,
float,
None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.beta_ledit,
float,
None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.c_ledit,
float,
None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.gamma_ledit,
float,
None)
self._model_mib.bind_value_update('num_residues',
self.processing_widget.num_residues_ledit,
float,
None)
self.processing_widget.space_group_combo.activated.\
connect(self._space_group_change)
self.processing_widget.run_processing_after_cbox.stateChanged.\
connect(self._run_processing_after_toggled)
self.processing_widget.run_processing_parallel_cbox.stateChanged.\
connect(self._run_processing_parallel_toggled)
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# If the acq. widget is used with grids then total osc range is not
# equal to num_images * osc_range, but num_images_per_line * osc_range
# For grids the osc total range is updated when a grid is selected
self.grid_mode = False
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.use_osc_start(False)
else:
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.fix_osc_start)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.osc_start_ledit.textEdited.connect(\
self.osc_start_ledit_changed)
self.acq_widget_layout.osc_range_ledit.textEdited.connect(\
self.osc_range_per_frame_ledit_changed)
self.acq_widget_layout.osc_total_range_ledit.textEdited.connect(\
self.osc_total_range_ledit_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
self.acq_widget_layout.kappa_ledit.textEdited.connect(\
self.kappa_ledit_changed)
self.acq_widget_layout.kappa_phi_ledit.textEdited.connect(\
self.kappa_phi_ledit_changed)
if self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit"):
self.acq_widget_layout.overlap_ledit.textChanged.connect(\
self.overlap_changed)
if self.acq_widget_layout.findChild(QCheckBox, "max_osc_range_cbx"):
self.acq_widget_layout.max_osc_range_cbx.toggled.connect(\
self.max_osc_range_toggled)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(\
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_per_frame_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.osc_total_range_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_total_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.first_img_validator = QIntValidator(\
0, 99999, self.acq_widget_layout.first_image_ledit)
self.num_img_validator = QIntValidator(\
1, 99999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
class AcquisitionWidget(QWidget):
acqParametersChangedSignal = pyqtSignal(list)
madEnergySelectedSignal = pyqtSignal(str, float, bool)
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# If the acq. widget is used with grids then total osc range is not
# equal to num_images * osc_range, but num_images_per_line * osc_range
# For grids the osc total range is updated when a grid is selected
self.grid_mode = False
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.use_osc_start(False)
else:
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.fix_osc_start)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.osc_start_ledit.textEdited.connect(\
self.osc_start_ledit_changed)
self.acq_widget_layout.osc_range_ledit.textEdited.connect(\
self.osc_range_per_frame_ledit_changed)
self.acq_widget_layout.osc_total_range_ledit.textEdited.connect(\
self.osc_total_range_ledit_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
self.acq_widget_layout.kappa_ledit.textEdited.connect(\
self.kappa_ledit_changed)
self.acq_widget_layout.kappa_phi_ledit.textEdited.connect(\
self.kappa_phi_ledit_changed)
if self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit"):
self.acq_widget_layout.overlap_ledit.textChanged.connect(\
self.overlap_changed)
if self.acq_widget_layout.findChild(QCheckBox, "max_osc_range_cbx"):
self.acq_widget_layout.max_osc_range_cbx.toggled.connect(\
self.max_osc_range_toggled)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(\
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_per_frame_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.osc_total_range_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_total_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.first_img_validator = QIntValidator(\
0, 99999, self.acq_widget_layout.first_image_ledit)
self.num_img_validator = QIntValidator(\
1, 99999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def use_max_osc_range(self, state):
self.acq_widget_layout.max_osc_range_cbx.setEnabled(state)
def fix_osc_start(self, state):
"""
Fix osc start, so the lineEdit do not change when osc is changed
"""
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def update_osc_start(self, new_value):
"""
Updates osc line edit
"""
if "osc_start" not in self.value_changed_list and \
not self.acq_widget_layout.osc_start_ledit.hasFocus() and \
not self.acq_widget_layout.osc_start_cbox.isChecked():
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.acq_widget_layout.osc_start_ledit.setText(
str(osc_start_value))
self._acquisition_parameters.osc_start = osc_start_value
#self.update_osc_total_range_limits()
#self.update_num_images_limits()
def osc_start_ledit_changed(self, osc_start):
"""Fixes osc start edit"""
if "osc_start" not in self.value_changed_list:
self.value_changed_list.append("osc_start")
self.update_osc_total_range_limits()
self.update_num_images_limits()
self.emit_acq_parameters_changed()
def update_osc_start_limits(self):
"""In the plate mode sets osc start limits"""
self.update_osc_total_range_limits()
self.update_num_images_limits()
def osc_range_per_frame_ledit_changed(self, new_value):
self.update_osc_total_range()
self.update_num_images_limits()
self.update_exp_time_limits()
self.emit_acq_parameters_changed()
def update_osc_range_per_frame_limits(self):
try:
max_osc_speed = self._diffractometer_hwobj.get_osc_max_speed()
top_limit = max_osc_speed * float(
self.acq_widget_layout.exp_time_ledit.text())
self.osc_range_per_frame_validator.setTop(top_limit)
tool_tip = "Oscillation range per frame limits 0 : " +\
"%0.4f\n4 digits precision." % top_limit
self.acq_widget_layout.osc_range_ledit.setToolTip(tool_tip)
self._acquisition_mib.validate_all()
except:
pass
def update_osc_total_range(self):
self.acq_widget_layout.osc_total_range_ledit.blockSignals(True)
if not self.grid_mode:
try:
self.acq_widget_layout.osc_total_range_ledit.setText(str(\
float(self.acq_widget_layout.osc_range_ledit.text()) * \
float(self.acq_widget_layout.num_images_ledit.text())))
except:
pass
self.acq_widget_layout.osc_total_range_ledit.blockSignals(False)
def update_total_exp_time(self):
try:
self.acq_widget_layout.total_exp_time_ledit.setText("%.2f" % \
(float(self.acq_widget_layout.exp_time_ledit.text()) * \
float(self.acq_widget_layout.num_images_ledit.text())))
except:
pass
def osc_total_range_ledit_changed(self, new_value):
if not self.grid_mode:
try:
num_images = int(float(new_value) / \
float(self.acq_widget_layout.osc_range_ledit.text()))
self.acq_widget_layout.num_images_ledit.blockSignals(True)
self.acq_widget_layout.num_images_ledit.setText("%d" %
num_images)
self._acquisition_parameters.num_images = num_images
self.acq_widget_layout.num_images_ledit.blockSignals(False)
except:
pass
self.emit_acq_parameters_changed()
def update_osc_total_range_limits(self, num_images=None):
"""Updates osc totol range. Limits are changed if a plate is used.
- For simple oscillation osc_range is defined by osc_start and
osc_start top limit.
- For mesh osc_range is defined by number of images per line
and osc in the middle of mesh
"""
if self._diffractometer_hwobj.in_plate_mode():
if hasattr(self.parent(), "set_osc_total_range"):
self.parent().set_osc_total_range(num_images)
self._acquisition_mib.validate_all()
def update_exp_time_limits(self):
try:
exp_time_limits = self._beamline_setup_hwobj.detector_hwobj.get_exposure_time_limits(
)
max_osc_speed = self._diffractometer_hwobj.get_osc_max_speed()
top_limit = float(
self.acq_widget_layout.osc_range_ledit.text()) / max_osc_speed
limits = (max(exp_time_limits[0], top_limit), exp_time_limits[1])
self.update_detector_exp_time_limits(limits)
except:
pass
def update_kappa(self, new_value):
"""
Updates kappa value
"""
if not self.acq_widget_layout.kappa_ledit.hasFocus() and \
new_value:
self.acq_widget_layout.kappa_ledit.setText(str(new_value))
self.emit_acq_parameters_changed()
def update_kappa_phi(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_phi_ledit.hasFocus() and \
new_value:
self.acq_widget_layout.kappa_phi_ledit.setText(str(new_value))
self.emit_acq_parameters_changed()
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget_layout.osc_start_cbox.setVisible(state)
self.acq_widget_layout.osc_start_label.setVisible(not state)
self.acq_widget_layout.osc_start_ledit.setEnabled(not state)
def use_kappa(self, state):
"""
Descript. :
"""
if self._diffractometer_hwobj is not None:
if self._diffractometer_hwobj.in_plate_mode():
state = False
self.acq_widget_layout.kappa_label.setEnabled(state)
self.acq_widget_layout.kappa_ledit.setEnabled(state)
self.acq_widget_layout.kappa_phi_label.setEnabled(state)
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
self._diffractometer_hwobj = self._beamline_setup_hwobj.diffractometer_hwobj
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
self.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_per_frame_validator.setRange(lower, upper, 4)
self.osc_total_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'osc_start', self.acq_widget_layout.osc_start_ledit, float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update(
'osc_range', self.acq_widget_layout.osc_range_ledit, float,
self.osc_range_per_frame_validator)
self._acquisition_mib.bind_value_update(
'osc_total_range', self.acq_widget_layout.osc_total_range_ledit,
float, self.osc_total_range_validator)
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'kappa', self.acq_widget_layout.kappa_ledit, float,
self.kappa_validator)
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'kappa_phi', self.acq_widget_layout.kappa_phi_ledit, float,
self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_validator.setRange(lower, upper, 6)
self._acquisition_mib.bind_value_update(
'exp_time', self.acq_widget_layout.exp_time_ledit, float,
self.exp_time_validator)
if 'number_of_images' in limits_dict:
limits = tuple(
map(float, limits_dict['number_of_images'].split(',')))
(lower, upper) = limits
self.num_img_validator.setRange(lower, upper)
self.first_img_validator.setRange(lower, upper)
self._acquisition_mib.bind_value_update(
'first_image', self.acq_widget_layout.first_image_ledit, int,
self.first_img_validator)
self._acquisition_mib.bind_value_update(
'num_images', self.acq_widget_layout.num_images_ledit, int,
self.num_img_validator)
num_passes = self.acq_widget_layout.findChild(QLineEdit,
"num_passes_ledit")
if num_passes:
self._acquisition_mib.\
bind_value_update('num_passes', num_passes, int,
QIntValidator(1, 1000, self))
overlap_ledit = self.acq_widget_layout.findChild(
QLineEdit, "overlap_ledit")
if overlap_ledit:
self._acquisition_mib.\
bind_value_update('overlap', overlap_ledit, float,
QDoubleValidator(-1000, 1000, 2, self))
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.update_energy_limits(
(self.energy_validator.bottom(), self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self.update_transmission_limits((self.transmission_validator.bottom(),
self.transmission_validator.top()))
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
#self.update_resolution_limits((self.resolution_validator.bottom(),
# self.resolution_validator.top()))
self._acquisition_mib.\
bind_value_update('shutterless',
self.acq_widget_layout.shutterless_cbx,
bool,
None)
self.set_tunable_energy(beamline_setup.tunable_wavelength())
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless(
)
self.acq_widget_layout.shutterless_cbx.setEnabled(has_shutter_less)
self.acq_widget_layout.shutterless_cbx.setChecked(has_shutter_less)
if self._beamline_setup_hwobj.disable_num_passes():
num_passes = self.acq_widget_layout.findChild(
QLineEdit, "num_passes_ledit")
if num_passes:
num_passes.setDisabled(True)
self.init_detector_roi_modes()
def first_image_ledit_change(self, new_value):
"""
Descript. :
"""
#if str(new_value).isdigit():
# #self._path_template.start_num = int(new_value)
# #widget = self.acq_widget_layout.first_image_ledit
self.emit_acq_parameters_changed()
def exposure_time_ledit_changed(self, new_values):
"""If the exposure time changes we have to check the osc speed
and if necessary update osc range per frame
"""
self.update_osc_range_per_frame_limits()
self.update_osc_total_range_limits()
self.update_total_exp_time()
self.emit_acq_parameters_changed()
def num_images_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
#self._path_template.num_files = int(new_value)
self.update_osc_range_per_frame_limits()
self.update_osc_total_range_limits()
self.update_osc_total_range()
self.update_total_exp_time()
self.emit_acq_parameters_changed()
def overlap_changed(self, new_value):
"""
Descript. :
"""
if self._beamline_setup_hwobj:
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless(
)
else:
has_shutter_less = True
if has_shutter_less:
try:
new_value = float(new_value)
except ValueError:
pass
if new_value != 0:
self.acq_widget_layout.shutterless_cbx.setEnabled(False)
self.acq_widget_layout.shutterless_cbx.setChecked(False)
self._acquisition_parameters.shutterless = False
else:
self.acq_widget_layout.shutterless_cbx.setEnabled(True)
self.acq_widget_layout.shutterless_cbx.setChecked(True)
self._acquisition_parameters.shutterless = True
def use_mad(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.setEnabled(state)
if state:
(name, energy) = self.get_mad_energy()
if energy != 0:
self.update_energy(energy)
self.madEnergySelectedSignal.emit(name, energy, state)
else:
self.update_energy(self.previous_energy)
energy = self._beamline_setup_hwobj.energy_hwobj.getCurrentEnergy()
self.madEnergySelectedSignal.emit('', self.previous_energy, state)
def max_osc_range_toggled(self, state):
self.update_osc_total_range_limits()
def get_mad_energy(self):
"""
Descript. :
"""
energy_str = str(self.acq_widget_layout.energies_combo.currentText())
(name, value) = energy_str.split(':')
name = name.strip()
value = value.strip()
value = 0 if (value == '-') else float(value)
return (name, value)
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.clear()
inflection = ('ip: %.4f' % energy_scan_result.inflection) if \
energy_scan_result.inflection else 'ip: -'
peak = ('pk: %.4f' % energy_scan_result.peak) if \
energy_scan_result.peak else 'pk: -'
first_remote = ('rm1: %.4f' % energy_scan_result.first_remote) if \
energy_scan_result.first_remote else 'rm1: -'
second_remote = ('rm2: %.4f' % energy_scan_result.second_remote) if \
energy_scan_result.second_remote else 'rm2: -'
self.acq_widget_layout.energies_combo.\
addItems([inflection, peak, first_remote, second_remote])
def energy_selected(self, index):
"""
Descript. :
"""
if self.acq_widget_layout.mad_cbox.isChecked():
(name, energy) = self.get_mad_energy()
if energy != 0:
self.update_energy(energy)
self.madEnergySelectedSignal.emit(name, energy, True)
def energy_ledit_changed(self, new_value):
if "energy" not in self.value_changed_list:
self.value_changed_list.append("energy")
self.emit_acq_parameters_changed()
def update_energy(self, energy, wav=None):
"""
Descript. :
"""
if "energy" not in self.value_changed_list and \
not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText(str(energy))
self.emit_acq_parameters_changed()
def transmission_ledit_changed(self, transmission):
if "transmission" not in self.value_changed_list:
self.value_changed_list.append("transmission")
self.emit_acq_parameters_changed()
def update_transmission(self, transmission):
if "transmission" not in self.value_changed_list:
self.acq_widget_layout.transmission_ledit.setText(
str(transmission))
self.emit_acq_parameters_changed()
def resolution_ledit_changed(self, resolution):
if "resolution" not in self.value_changed_list:
self.value_changed_list.append("resolution")
self.emit_acq_parameters_changed()
def update_resolution(self, resolution):
if "resolution" not in self.value_changed_list and \
not self.acq_widget_layout.resolution_ledit.hasFocus():
self.acq_widget_layout.resolution_ledit.setText(str(resolution))
self.emit_acq_parameters_changed()
def update_energy_limits(self, limits):
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.4f : %0.4f keV\n" % \
(limits[0], limits[1]) + \
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(\
"Transmission limits %0.2f : %0.2f %%\n" % \
(limits[0], limits[1]) + \
"2 digits precision.")
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.4f : %0.4f %s\n" % \
(limits[0], limits[1], chr(197)) +
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
if limits:
self.exp_time_validator.setRange(limits[0], limits[1], 6)
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.6f s : %0.1f s\n" % \
(limits[0], limits[1]) + \
"6 digits precision.")
self._acquisition_mib.validate_all()
def update_num_images_limits(self, num_images_limits=None):
"""Updates number of images limit. Method used if plate mode.
"""
self._acquisition_mib.validate_all()
return
if self._diffractometer_hwobj.in_plate_mode():
if num_images_limits is None:
try:
osc_start = float(
self.acq_widget_layout.osc_start_ledit.text())
osc_range = float(
self.acq_widget_layout.osc_range_ledit.text())
except ValueError:
return
if osc_range == 0:
return
num_images_limits = int((self.osc_start_validator.top() - \
osc_start) / osc_range)
self.num_img_validator.setTop(num_images_limits)
self.acq_widget_layout.num_images_ledit.setToolTip(\
"Number of images limits : %d" % num_images_limits)
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj.detector_hwobj.get_roi_modes(
)
if (len(roi_modes) > 0
and self.acq_widget_layout.detector_roi_mode_combo.count()
== 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
## str,
# None)
def update_detector_roi_mode(self, roi_mode_index):
"""
Descript. :
"""
if roi_mode_index is not None and \
self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(
roi_mode_index)
def kappa_ledit_changed(self, new_value):
if "kappa" not in self.value_changed_list:
self.value_changed_list.append("kappa")
self.emit_acq_parameters_changed()
def kappa_phi_ledit_changed(self, new_value):
if "kappa_phi" not in self.value_changed_list:
self.value_changed_list.append("kappa_phi")
self.emit_acq_parameters_changed()
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._path_template = path_template
self._acquisition_mib.set_model(acquisition_parameters)
#Update mad widgets
mad = True if self._path_template.mad_prefix != '' else False
if mad:
mad_prefix = str(self._path_template.mad_prefix)
index = MAD_ENERGY_COMBO_NAMES[str(mad_prefix)]
self.acq_widget_layout.energies_combo.setCurrentIndex(index)
self.acq_widget_layout.mad_cbox.setChecked(True)
self.acq_widget_layout.energies_combo.setEnabled(True)
else:
self.acq_widget_layout.mad_cbox.setChecked(False)
self.acq_widget_layout.energies_combo.setEnabled(False)
self.acq_widget_layout.energies_combo.setCurrentIndex(0)
#self.update_osc_start_limits()
#self.update_osc_total_range()
self.emit_acq_parameters_changed()
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
self.acq_widget_layout.mad_cbox.setEnabled(state)
self.acq_widget_layout.energies_combo.setEnabled(state)
def check_parameter_conflict(self):
return self._acquisition_mib.validate_all()
def emit_acq_parameters_changed(self):
self.acqParametersChangedSignal.emit(
self._acquisition_mib.validate_all())
def __init__(self, *args):
"""
Descript. :
"""
BlissWidget.__init__(self, *args)
# Internal variables ------------------------------------------------
self.sample = queue_model_objects.Sample()
self.crystal = self.sample.crystals[0]
self.sample_mib = DataModelInputBinder(self.sample)
self.crystal_mib = DataModelInputBinder(self.crystal)
# Signals ------------------------------------------------------------
# Slots --------------------------------------------------------------
self.defineSlot("populate_sample_details", ({}))
# Graphic elements ----------------------------------------------------
_info_widget = QWidget(self)
self.crystal_widget = loadUi(\
os.path.join(os.path.dirname(__file__),
"widgets/ui_files/Qt4_crystal_widget_layout.ui"))
self.sample_info_widget = loadUi(
os.path.join(os.path.dirname(__file__),
"widgets/ui_files/Qt4_sample_info_widget_layout.ui"))
#self.ispyb_sample_info_widget = ISPyBSampleInfoWidget(self)
# Layout --------------------------------------------------------------
_info_widget_hlayout = QHBoxLayout(_info_widget)
_info_widget_hlayout.addWidget(self.sample_info_widget)
_info_widget_hlayout.addWidget(self.crystal_widget)
_info_widget_hlayout.addStretch(0)
_info_widget_hlayout.setSpacing(0)
_info_widget_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout = QVBoxLayout(self)
_main_hlayout.addWidget(_info_widget)
#_main_hlayout.addWidget(self.ispyb_sample_info_widget)
_main_hlayout.addStretch(0)
_main_hlayout.setSpacing(0)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self.crystal_mib.bind_value_update(
'space_group', self.crystal_widget.space_group_value_label, str,
None)
self.crystal_mib.bind_value_update(
'protein_acronym', self.crystal_widget.protein_acronym_value_label,
str, None)
self.crystal_mib.bind_value_update('cell_a',
self.crystal_widget.a_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_alpha', self.crystal_widget.alpha_value_label, str, None)
self.crystal_mib.bind_value_update('cell_b',
self.crystal_widget.b_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_beta', self.crystal_widget.beta_value_label, str, None)
self.crystal_mib.bind_value_update('cell_c',
self.crystal_widget.c_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_gamma', self.crystal_widget.gamma_value_label, str, None)
self.sample_mib.bind_value_update(
'name', self.sample_info_widget.name_value_label, str, None)
self.sample_mib.bind_value_update(
'code', self.sample_info_widget.data_matrix_value_label, str, None)
self.sample_mib.bind_value_update(
'holder_length', self.sample_info_widget.holder_length_value_label,
str, None)
self.sample_mib.bind_value_update(
'lims_sample_location',
self.sample_info_widget.sample_location_value_label, str, None)
self.sample_mib.bind_value_update(
'lims_container_location',
self.sample_info_widget.basket_location_value_label, str, None)
class DCParametersWidget(QWidget):
def __init__(self, parent=None, name="parameter_widget"):
QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Properties ----------------------------------------------------------
# Signals ------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self._data_collection = None
self.add_dc_cb = None
self._tree_view_item = None
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout='horizontal')
self._processing_widget = ProcessingWidget(_dc_parameters_widget)
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.addWidget(self._processing_widget)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(10)
_main_hlayout = QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.setContentsMargins(0, 0, 0, 0)
_main_hlayout.setSpacing(2)
_main_hlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self._acq_widget.madEnergySelectedSignal.\
connect(self.mad_energy_selected)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
# Other ---------------------------------------------------------------
def set_beamline_setup(self, bl_setup):
self._acq_widget.set_beamline_setup(bl_setup)
self._beamline_setup_hwobj = bl_setup
def _prefix_ledit_change(self, new_value):
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._data_collection.set_name(prefix)
self._tree_view_item.setText(0, self._data_collection.get_name())
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_collection.set_number(int(new_value))
self._tree_view_item.setText(0, self._data_collection.get_name())
def acq_parameters_changed(self):
if self._tree_view_item is None:
#TODO fix this
return
#TODO get tree view in another way
dc_tree_widget = self._tree_view_item.listView().parent().parent()
dc_tree_widget.check_for_path_collisions()
path_template = self._data_collection.acquisitions[0].path_template
path_conflict = self.queue_model_hwobj.\
check_for_path_collisions(path_template)
def __add_data_collection(self):
return self.add_dc_cb(self._data_collection, self.collection_type)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = str(name)
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_parameter_widget(self._tree_view_item)
def set_enabled(self, state):
self._acq_widget.setEnabled(state)
self._data_path_widget.setEnabled(state)
self._processing_widget.setEnabled(state)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = data_collection.acquisitions[
0].path_template
self._acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self._acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self._data_path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self._processing_widget.update_data_model(data_collection.\
processing_parameters)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
class DCParametersWidget(QtGui.QWidget):
def __init__(self, parent=None, name="parameter_widget"):
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Properties ----------------------------------------------------------
# Signals ------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self._data_collection = None
self.add_dc_cb = None
self._tree_view_item = None
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QtGui.QWidget(self)
self.caution_pixmap = Qt4_Icons.load("Caution2.png")
self.path_widget = DataPathWidget(_dc_parameters_widget)
self.acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout='horizontal')
#self.acq_widget.setFixedHeight(170)
self.processing_widget = ProcessingWidget(_dc_parameters_widget)
self.position_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
#self.position_widget.setMinimumSize(310, 210)
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QtGui.QVBoxLayout(self)
_dc_parameters_widget_layout.addWidget(self.path_widget)
_dc_parameters_widget_layout.addWidget(self.acq_widget)
_dc_parameters_widget_layout.addWidget(self.processing_widget)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(0)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_dc_parameters_widget.setLayout(_dc_parameters_widget_layout)
_main_hlayout = QtGui.QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.addWidget(self.position_widget)
_main_hlayout.setSpacing(2)
_main_hlayout.setContentsMargins(0, 0, 0, 0)
_main_hlayout.addStretch(0)
self.setLayout(_main_hlayout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.path_widget.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self.connect(self.acq_widget, QtCore.SIGNAL('mad_energy_selected'),
self.mad_energy_selected)
self.connect(self.acq_widget, QtCore.SIGNAL("path_template_changed"),
self.handle_path_conflict)
#QtCore.QObject.connect(QtGui.QApplication, QtCore.SIGNAL('tab_changed'),
# self.tab_changed)
# Other ---------------------------------------------------------------
Qt4_widget_colors.set_widget_color(self.path_widget,
Qt4_widget_colors.GROUP_BOX_GRAY)
Qt4_widget_colors.set_widget_color(self.acq_widget,
Qt4_widget_colors.GROUP_BOX_GRAY)
Qt4_widget_colors.set_widget_color(self.processing_widget,
Qt4_widget_colors.GROUP_BOX_GRAY)
Qt4_widget_colors.set_widget_color(self.position_widget,
Qt4_widget_colors.GROUP_BOX_GRAY)
def set_beamline_setup(self, bl_setup):
self.acq_widget.set_beamline_setup(bl_setup)
self._beamline_setup_hwobj = bl_setup
def _prefix_ledit_change(self, new_value):
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._data_collection.set_name(prefix)
self._tree_view_item.setText(0, self._data_collection.get_name())
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_collection.set_number(int(new_value))
self._tree_view_item.setText(0, self._data_collection.get_name())
def handle_path_conflict(self, widget, new_value):
if self._tree_view_item is None:
#TODO fix this
return
dc_tree_widget = self._tree_view_item.listView().parent()
dc_tree_widget.check_for_path_collisions()
path_template = self._data_collection.acquisitions[0].path_template
path_conflict = self.queue_model_hwobj.\
check_for_path_collisions(path_template)
if new_value != '':
if path_conflict:
logging.getLogger("user_level_log").\
error('The current path settings will overwrite data' +\
' from another task. Correct the problem before collecting')
widget.setPaletteBackgroundColor(widget_colors.LIGHT_RED)
else:
widget.setPaletteBackgroundColor(widget_colors.WHITE)
def __add_data_collection(self):
return self.add_dc_cb(self._data_collection, self.collection_type)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self.path_widget.set_run_number(run_number)
self.path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_parameter_widget(self._tree_view_item)
def set_enabled(self, state):
self.acq_widget.setEnabled(state)
self.path_widget.setEnabled(state)
self.processing_widget.setEnabled(state)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self.path_widget._data_model = data_collection.acquisitions[
0].path_template
self.acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self.acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self.acq_widget.use_osc_start(True)
self.path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self.processing_widget.update_data_model(data_collection.\
processing_parameters)
if data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent=None, name="parameter_widget"):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._char = None
self._char_params = queue_model_objects.CharacterisationParameters()
self._char_params_mib = DataModelInputBinder(self._char_params)
self._tree_view_item = None
self.previous_energy = None
self.add_dc_cb = None
# Graphic elements ----------------------------------------------------
rone_widget = QtGui.QWidget(self)
self.reference_img_widget = ReferenceImageWidget(rone_widget)
self.acq_widget = self.reference_img_widget.acq_widget
self.path_widget = self.reference_img_widget.path_widget
self.position_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
self.position_widget.setMinimumSize(450, 340)
rtwo_widget = QtGui.QWidget(self)
self.char_type_widget = CharTypeWidget(rtwo_widget)
self.routine_dc_widget = self.char_type_widget.routine_dc_page
self.sad_widget = self.char_type_widget.sad_page
self.rad_dmg_char_widget = self.char_type_widget.rad_damage_page
self.opt_parameters_widget = OptimisationParametersWidgetLayout(self)
rtree_widget = QtGui.QWidget(self)
self.rad_dmg_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_radiation_damage_model_widget_layout.ui'))
self.vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
# Layout --------------------------------------------------------------
rone_widget_layout = QtGui.QHBoxLayout(self)
rone_widget_layout.addWidget(self.reference_img_widget)
rone_widget_layout.addWidget(self.position_widget)
#rone_widget_layout.addStretch(0)
rone_widget_layout.setSpacing(2)
rone_widget_layout.setContentsMargins(0, 0, 0, 0)
rone_widget.setLayout(rone_widget_layout)
rtwo_widget_layout = QtGui.QHBoxLayout(self)
rtwo_widget_layout.addWidget(self.char_type_widget)
rtwo_widget_layout.addWidget(self.opt_parameters_widget)
rtwo_widget_layout.addStretch(0)
rtwo_widget_layout.setSpacing(2)
rtwo_widget_layout.setContentsMargins(0, 0, 0, 0)
rtwo_widget.setLayout(rtwo_widget_layout)
rtree_widget_layout = QtGui.QHBoxLayout(self)
rtree_widget_layout.addWidget(self.rad_dmg_widget)
rtree_widget_layout.addWidget(self.vertical_dimension_widget)
rtree_widget_layout.addStretch(0)
rtree_widget_layout.setSpacing(2)
rtree_widget_layout.setContentsMargins(0, 0, 0, 0)
rtree_widget.setLayout(rtree_widget_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(rone_widget)
_main_vlayout.addWidget(rtwo_widget)
_main_vlayout.addWidget(rtree_widget)
_main_vlayout.setSpacing(2)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies -------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.toggle_permitted_range(self.opt_parameters_widget.\
opt_param_widget.permitted_range_cbx.isChecked())
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx.\
toggled.connect(self.toggle_permitted_range)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'min_dose', self.routine_dc_widget.dose_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_time', self.routine_dc_widget.time_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_min_dose', self.routine_dc_widget.min_dose_radio, bool, None)
self._char_params_mib.bind_value_update(
'use_min_time', self.routine_dc_widget.min_time_radio, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self.routine_dc_widget.radiation_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'auto_res', self.sad_widget.automatic_resolution_radio, bool, None)
self._char_params_mib.bind_value_update(
'sad_res', self.sad_widget.sad_resolution_ledit, float,
QtGui.QDoubleValidator(0.5, 20, 3, self))
self._char_params_mib.bind_value_update(
'opt_sad', self.sad_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'determine_rad_params', self.rad_dmg_char_widget.rad_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'burn_osc_start', self.rad_dmg_char_widget.burn_osc_start_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'burn_osc_interval',
self.rad_dmg_char_widget.burn_osc_interval_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'use_aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(\
'aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_i_sigma',
self.opt_parameters_widget.opt_param_widget.i_over_sigma_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_completness',
self.opt_parameters_widget.opt_param_widget.aimed_comp_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'strategy_complexity',
self.opt_parameters_widget.opt_param_widget.start_comp_cbox, int,
None)
self._char_params_mib.bind_value_update(
'use_permitted_rotation',
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'permitted_phi_start',
self.opt_parameters_widget.opt_param_widget.phi_start_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'permitted_phi_end',
self.opt_parameters_widget.opt_param_widget.phi_end_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'low_res_pass_strat',
self.opt_parameters_widget.opt_param_widget.low_res_pass_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'rad_suscept', self.rad_dmg_widget.sensetivity_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'beta', self.rad_dmg_widget.beta_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'gamma', self.rad_dmg_widget.gamma_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vdim', self.vertical_dimension_widget.max_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vdim', self.vertical_dimension_widget.min_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vphi', self.vertical_dimension_widget.min_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vphi', self.vertical_dimension_widget.max_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
#self._char_params_mib.bind_value_update('space_group',
# self.vertical_dimension_widget.space_group_ledit,
# str,
# None)
self.vertical_dimension_widget.space_group_ledit.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self.char_type_widget.charact_type_tbox.currentChanged.connect(\
self.update_char_type)
self.rad_dmg_char_widget.rad_damage_cbx.toggled.connect(\
self.enable_opt_parameters_widget)
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx.\
toggled.connect(self.enable_maximum_res_ledit)
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx.\
toggled.connect(self.enable_aimed_mult_ledit)
self.path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
if not name:
self.setName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_gbox = QtGui.QGroupBox('Data location', self)
self._data_path_widget = DataPathWidget(self._data_path_gbox,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
gbox = self._char_widget.findChild(QtGui.QGroupBox,
"characterisation_gbox")
p = gbox.palette()
p.setColor(QtGui.QPalette.Window, QtCore.Qt.red)
p.setColor(QtGui.QPalette.Highlight, QtCore.Qt.red)
gbox.setPalette(p)
# Layout --------------------------------------------------------------
_data_path_gbox_layout = QtGui.QVBoxLayout(self)
_data_path_gbox_layout.addWidget(self._data_path_widget)
_data_path_gbox_layout.setSpacing(0)
_data_path_gbox_layout.setContentsMargins(0, 0, 0, 0)
self._data_path_gbox.setLayout(_data_path_gbox_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_gbox)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
self.connect(self._data_path_widget,
QtCore.SIGNAL("pathTemplateChanged"),
self.handle_path_conflict)
class ProcessingWidget(QWidget):
enableProcessingSignal = pyqtSignal(bool, bool)
def __init__(self, parent=None, name=None, fl=0, data_model=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.processing_widget.space_group_combo.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.a_ledit,
float,
None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.alpha_ledit,
float,
None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.b_ledit,
float,
None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.beta_ledit,
float,
None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.c_ledit,
float,
None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.gamma_ledit,
float,
None)
self._model_mib.bind_value_update('num_residues',
self.processing_widget.num_residues_ledit,
float,
None)
self.processing_widget.space_group_combo.activated.\
connect(self._space_group_change)
self.processing_widget.run_processing_after_cbox.stateChanged.\
connect(self._run_processing_after_toggled)
self.processing_widget.run_processing_parallel_cbox.stateChanged.\
connect(self._run_processing_parallel_toggled)
def _space_group_change(self, index):
self._model.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
index = 0
if space_group in queue_model_enumerables.XTAL_SPACEGROUPS:
index = queue_model_enumerables.XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self.processing_widget.space_group_combo.setCurrentIndex(index)
def update_data_model(self, model):
self._model = model
self._model_mib.set_model(model)
self._set_space_group(model.space_group)
def _run_processing_after_toggled(self, state):
self.enableProcessingSignal.emit(\
self.processing_widget.run_processing_after_cbox.isChecked(),
self.processing_widget.run_processing_parallel_cbox.isChecked())
def _run_processing_parallel_toggled(self, state):
self.enableProcessingSignal.emit(\
self.processing_widget.run_processing_after_cbox.isChecked(),
self.processing_widget.run_processing_parallel_cbox.isChecked())
class DataPathWidget(QWidget):
pathTemplateChangedSignal = pyqtSignal()
def __init__(self, parent = None, name = '', fl = 0, data_model = None,
layout = None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._base_image_dir = None
self._base_process_dir = None
self.path_conflict_state = False
self.enable_macros = False
if data_model is None:
self._data_model = queue_model_objects.PathTemplate()
else:
self._data_model = data_model
self._data_model_pm = DataModelInputBinder(self._data_model)
# Graphic elements ----------------------------------------------------
if layout == "vertical":
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_vertical_layout.ui"))
else:
self.data_path_layout = loadUi(\
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_horizontal_layout.ui"))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self.data_path_layout)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
# Qt signal/slot connections ------------------------------------------
self.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.data_path_layout.browse_button.clicked.\
connect(self._browse_clicked)
self.data_path_layout.folder_ledit.textChanged.\
connect(self._folder_ledit_change)
# Other ---------------------------------------------------------------
self._data_model_pm.bind_value_update('base_prefix',
self.data_path_layout.prefix_ledit, str, None)
self._data_model_pm.bind_value_update('run_number',
self.data_path_layout.run_number_ledit,
int, QIntValidator(0, 1000, self))
def _browse_clicked(self):
"""
Descript. :
"""
file_dialog = QFileDialog(self)
file_dialog.setNameFilter("%s*" % self._base_image_dir)
selected_dir = str(file_dialog.getExistingDirectory(\
self, "Select a directory", self._base_image_dir))
selecte_dir = os.path.dirname(selected_dir)
if selected_dir is not None and len(selected_dir) > 0:
self.set_directory(selected_dir)
def _prefix_ledit_change(self, new_value):
"""
Descript. :
"""
cursor_pos = self.data_path_layout.prefix_ledit.cursorPosition()
if len(new_value) > 0:
available_chars = string.ascii_lowercase + string.ascii_uppercase + \
string.digits + "-_"
if self.enable_macros:
available_chars += "%"
new_value = ''.join(i for i in str(new_value) if i in available_chars)
if len(new_value) > 50:
logging.getLogger("GUI").\
error("Current prefix is to long (max 50 characters are allowed)")
new_value = new_value[:-1]
self.data_path_layout.prefix_ledit.setText(new_value)
self.data_path_layout.prefix_ledit.setCursorPosition(cursor_pos)
self._data_model.base_prefix = str(new_value)
self.update_file_name()
self.pathTemplateChangedSignal.emit()
def _run_number_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self.set_run_number(new_value)
self.update_file_name()
self.pathTemplateChangedSignal.emit()
def _folder_ledit_change(self, new_value):
"""
Descript. :
"""
base_image_dir = self._base_image_dir
base_proc_dir = self._base_process_dir
new_sub_dir = str(new_value).strip(' ')
cursor_pos = self.data_path_layout.folder_ledit.cursorPosition()
if len(new_value) > 0:
available_chars = string.ascii_lowercase + string.ascii_uppercase + \
string.digits + "-_/"
if self.enable_macros:
available_chars += "%"
new_value = ''.join(i for i in str(new_value) if i in available_chars)
self.data_path_layout.folder_ledit.setText(new_value)
self.data_path_layout.folder_ledit.setCursorPosition(cursor_pos)
if len(new_sub_dir) > 0:
if new_sub_dir[0] == os.path.sep:
new_sub_dir = new_sub_dir[1:]
new_image_directory = os.path.join(base_image_dir, str(new_sub_dir))
new_proc_dir = os.path.join(base_proc_dir, str(new_sub_dir))
else:
new_image_directory = base_image_dir
new_proc_dir = base_proc_dir
self._data_model.directory = new_image_directory
self._data_model.process_directory = new_proc_dir
Qt4_widget_colors.set_widget_color(self.data_path_layout.folder_ledit,
Qt4_widget_colors.WHITE)
self.pathTemplateChangedSignal.emit()
def update_file_name(self):
"""
Descript. : updates filename if prefix or run number changed
at start values are initalized before precision is set.
so a check for isdigit is done to be on the safe side
"""
if str(self._data_model.precision).isdigit():
file_name = self._data_model.get_image_file_name()
file_name = file_name.replace('%' + self._data_model.precision + 'd',
int(self._data_model.precision) * '#' )
file_name = file_name.strip(' ')
self.data_path_layout.file_name_value_label.setText(file_name)
def set_data_path(self, path):
"""
Descript. :
"""
(dir_name, file_name) = os.path.split(path)
self.set_directory(dir_name)
file_name = file_name.replace('%' + self._data_model.precision + 'd',
int(self._data_model.precision) * '#' )
self.data_path_layout.file_name_value_label.setText(file_name)
def set_directory(self, directory):
"""
Descript. :
"""
base_image_dir = self._base_image_dir
dir_parts = directory.split(base_image_dir)
if len(dir_parts) > 1:
sub_dir = dir_parts[1]
self._data_model.directory = directory
self.data_path_layout.folder_ledit.setText(sub_dir)
else:
self.data_path_layout.folder_ledit.setText('')
self._data_model.directory = base_image_dir
self.data_path_layout.base_path_ledit.setText(base_image_dir)
def set_run_number(self, run_number):
"""
Descript. :
"""
self._data_model.run_number = int(run_number)
self.data_path_layout.run_number_ledit.setText(str(run_number))
def set_prefix(self, base_prefix):
"""
Descript. :
"""
self._data_model.base_prefix = str(base_prefix)
self.data_path_layout.prefix_ledit.setText(str(base_prefix))
file_name = self._data_model.get_image_file_name()
file_name = file_name.replace('%' + self._data_model.precision + 'd',
int(self._data_model.precision) * '#' )
self.data_path_layout.file_name_value_label.setText(file_name)
def update_data_model(self, data_model):
"""
Descript. :
"""
self._data_model = data_model
self.set_data_path(data_model.get_image_path())
self._data_model_pm.set_model(data_model)
def indicate_path_conflict(self, conflict):
"""
Descript. :
"""
if conflict:
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.prefix_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.run_number_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.folder_ledit,
Qt4_widget_colors.LIGHT_RED,
QPalette.Base)
logging.getLogger("GUI").\
error('The current path settings will overwrite data ' + \
'from another task. Correct the problem before ' + \
'adding to queue')
else:
# We had a conflict previous, but its corrected now !
if self.path_conflict_state:
logging.getLogger("GUI").info('Path valid')
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.prefix_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.run_number_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
Qt4_widget_colors.set_widget_color(\
self.data_path_layout.folder_ledit,
Qt4_widget_colors.WHITE,
QPalette.Base)
self.path_conflict_state = conflict
class CreateCharWidget(CreateTaskBase):
"""
Descript. :
"""
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_widget = DataPathWidget(self,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(2, 2, 2, 2)
_main_vlayout.setSpacing(6)
_main_vlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.\
connect(self.path_template_changed)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(\
self.characterisation_gbox_toggled)
self._char_widget.wait_result_cbx.toggled.connect(\
self.wait_results_cbx_toggled)
self._char_widget.execute_plan_cbx.toggled.connect(\
self.run_diffraction_plan_cbx_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
def enable_compression(self, state):
CreateTaskBase.enable_compression(self, False)
def use_induced_burn(self, state):
"""
Descript. :
"""
self._acquisition_parameters.induce_burn = state
def _space_group_change(self, index):
"""
Descript. :
"""
self._char_params.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
"""
Descript. :
"""
index = 0
if self._vertical_dimension_widget:
if space_group in XTAL_SPACEGROUPS:
index = XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self._vertical_dimension_widget.space_group_ledit.\
setCurrentIndex(index)
def init_models(self):
"""
Descript. :
"""
CreateTaskBase.init_models(self)
self._init_models()
def _init_models(self):
"""
Descript. :
"""
self._char = queue_model_objects.Characterisation()
self._char_params = self._char.characterisation_parameters
self._processing_parameters = queue_model_objects.ProcessingParameters(
)
self._set_space_group(self._processing_parameters.space_group)
if self._beamline_setup_hwobj is not None:
self._acquisition_parameters = self._beamline_setup_hwobj.\
get_default_char_acq_parameters()
self._char_params = self._beamline_setup_hwobj.\
get_default_characterisation_parameters()
else:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters(
)
self._path_template.reference_image_prefix = 'ref'
# The num images drop down default value is 1
# we would like it to be 2
self._acquisition_parameters.num_images = 2
self._char.characterisation_software =\
queue_model_enumerables.COLLECTION_ORIGIN.EDNA
self._path_template.num_files = 2
self._path_template.compression = False
self._acquisition_parameters.shutterless = False
def single_item_selection(self, tree_item):
"""
Descript. :
"""
CreateTaskBase.single_item_selection(self, tree_item)
if isinstance(tree_item, Qt4_queue_item.SampleQueueItem):
#self._init_models()
if self._char_params.space_group == "":
sample_model = tree_item.get_model()
self._set_space_group(
sample_model.processing_parameters.space_group)
#self._acq_widget.update_data_model(self._acquisition_parameters,
# self._path_template)
#self._char_params_mib.set_model(self._char_params)
elif isinstance(tree_item, Qt4_queue_item.BasketQueueItem):
self.setDisabled(False)
elif isinstance(tree_item, Qt4_queue_item.CharacterisationQueueItem):
if tree_item.get_model().is_executed():
self.setDisabled(True)
else:
self.setDisabled(False)
self._char = tree_item.get_model()
if self._char.get_path_template():
self._path_template = self._char.get_path_template()
self._data_path_widget.update_data_model(self._path_template)
data_collection = self._char.reference_image_collection
self._char_params = self._char.characterisation_parameters
self._char_params_mib.set_model(self._char_params)
self._acquisition_parameters = data_collection.acquisitions[0].\
acquisition_parameters
self._acq_widget.update_data_model(self._acquisition_parameters,
self._path_template)
#self.get_acquisition_widget().use_osc_start(True)
if len(data_collection.acquisitions) == 1:
self.select_shape_with_cpos(self._acquisition_parameters.\
centred_position)
self._processing_parameters = data_collection.processing_parameters
else:
self.setDisabled(True)
def update_processing_parameters(self, crystal):
"""
Descript. :
"""
self._processing_parameters.space_group = crystal.space_group
self._char_params.space_group = crystal.space_group
self._processing_parameters.cell_a = crystal.cell_a
self._processing_parameters.cell_alpha = crystal.cell_alpha
self._processing_parameters.cell_b = crystal.cell_b
self._processing_parameters.cell_beta = crystal.cell_beta
self._processing_parameters.cell_c = crystal.cell_c
self._processing_parameters.cell_gamma = crystal.cell_gamma
def approve_creation(self):
"""
Descript. :
"""
result = CreateTaskBase.approve_creation(self)
selected_shapes = self._graphics_manager_hwobj.get_selected_shapes()
for shape in selected_shapes:
if isinstance(shape, GraphicsItemPoint):
result = True
return result
# Called by the owning widget (task_toolbox_widget) to create
# a collection. when a data collection group is selected.
def _create_task(self, sample, shape):
"""
Descript. :
"""
tasks = []
if not shape or not isinstance(shape, GraphicsItemPoint):
cpos = queue_model_objects.CentredPosition()
cpos.snapshot_image = self._graphics_manager_hwobj.get_scene_snapshot(
)
else:
# Shapes selected and sample is mounted, get the
# centred positions for the shapes
snapshot = self._graphics_manager_hwobj.\
get_scene_snapshot(shape)
cpos = copy.deepcopy(shape.get_centred_position())
cpos.snapshot_image = snapshot
char_params = copy.deepcopy(self._char_params)
acq = self._create_acq(sample)
dc = queue_model_objects.\
DataCollection([acq], sample.crystals[0],
self._processing_parameters)
# Reference images for characterisations should be taken 90 deg apart
# this is achived by setting overap to -89
acq.acquisition_parameters.overlap = -89
acq.acquisition_parameters.centred_position = cpos
dc.acquisitions[0] = acq
dc.experiment_type = queue_model_enumerables.EXPERIMENT_TYPE.EDNA_REF
dc.run_processing_parallel = False
char = queue_model_objects.Characterisation(dc, char_params)
char.set_name(dc.acquisitions[0].\
path_template.get_prefix())
char.set_number(dc.acquisitions[0].\
path_template.run_number)
char.run_characterisation = self._char_widget.characterisation_gbox.isChecked(
)
char.wait_result = self._char_widget.wait_result_cbx.isChecked()
char.run_diffraction_plan = self._char_widget.execute_plan_cbx.isChecked(
)
tasks.append(char)
self._path_template.run_number += 1
return tasks
def characterisation_gbox_toggled(self, state):
if self._char:
self._char.run_characterisation = state
def wait_results_cbx_toggled(self, state):
if self._char:
self._char.wait_result = state
def run_diffraction_plan_cbx_toggled(self, state):
if self._char:
self._char.run_diffraction_plan = state
class DCParametersWidget(QtGui.QWidget):
def __init__(self, parent = None, name = "parameter_widget"):
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Properties ----------------------------------------------------------
# Signals ------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self._data_collection = None
self.add_dc_cb = None
self._tree_view_item = None
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QtGui.QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout = 'horizontal')
#self._acq_widget.setFixedHeight(170)
self._processing_widget = ProcessingWidget(_dc_parameters_widget)
_snapshot_widget = QtGui.QWidget(self)
self.position_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QtGui.QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.addWidget(self._processing_widget)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(0)
_snapshots_vlayout = QtGui.QVBoxLayout(_snapshot_widget)
_snapshots_vlayout.addWidget(self.position_widget)
_snapshots_vlayout.setContentsMargins(0, 0, 0, 0)
_snapshots_vlayout.setSpacing(2)
_snapshots_vlayout.addStretch(10)
_main_hlayout = QtGui.QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.addWidget(_snapshot_widget)
_main_hlayout.setContentsMargins(0, 0, 0, 0)
_main_hlayout.setSpacing(2)
_main_hlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self._acq_widget.madEnergySelectedSignal.connect(self.mad_energy_selected)
self._acq_widget.acqParametersChangedSignal.connect(\
self.acq_parameters_changed)
# Other ---------------------------------------------------------------
def set_beamline_setup(self, bl_setup):
self._acq_widget.set_beamline_setup(bl_setup)
self._beamline_setup_hwobj = bl_setup
def _prefix_ledit_change(self, new_value):
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._data_collection.set_name(prefix)
self._tree_view_item.setText(0, self._data_collection.get_name())
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_collection.set_number(int(new_value))
self._tree_view_item.setText(0, self._data_collection.get_name())
def acq_parameters_changed(self):
if self._tree_view_item is None:
#TODO fix this
return
dc_tree_widget = self._tree_view_item.listView().parent()
dc_tree_widget.check_for_path_collisions()
path_template = self._data_collection.acquisitions[0].path_template
path_conflict = self.queue_model_hwobj.\
check_for_path_collisions(path_template)
if new_value != '':
if path_conflict:
logging.getLogger("user_level_log").\
error('The current path settings will overwrite data' +\
' from another task. Correct the problem before collecting')
widget.setPaletteBackgroundColor(widget_colors.LIGHT_RED)
else:
widget.setPaletteBackgroundColor(widget_colors.WHITE)
def __add_data_collection(self):
return self.add_dc_cb(self._data_collection, self.collection_type)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_parameter_widget(self._tree_view_item)
def set_enabled(self, state):
self._acq_widget.setEnabled(state)
self._data_path_widget.setEnabled(state)
self._processing_widget.setEnabled(state)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = data_collection.acquisitions[0].path_template
self._acq_widget.set_energies(data_collection.crystal.energy_scan_result)
self._acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self._data_path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self._processing_widget.update_data_model(data_collection.\
processing_parameters)
if data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
class AcquisitionWidgetSimple(QtGui.QWidget):
"""
Descript. :
"""
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = None):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.enable_parameter_update = True
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget_layout = uic.loadUi(os.path.join(os.path.dirname(\
__file__), "ui_files/Qt4_acquisition_widget_vertical_simple_layout.ui"))
# Layout --------------------------------------------------------------
main_layout = QtGui.QVBoxLayout(self)
main_layout.addWidget(self.acq_widget_layout)
main_layout.setSpacing(0)
main_layout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.num_images_cbox.activated.connect(\
self.update_num_images)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
# Other ---------------------------------------------------------------
self.energy_validator = QtGui.QDoubleValidator(0, 25, 5, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0, 10000, 5, self)
#self.acq_widget_layout.osc_start_ledit.setEnabled(False)
#self.acq_widget_layout.kappa_ledit.setEnabled(False)
#self.acq_widget_layout.kappa_phi_ledit.setEnabled(False)
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def set_enable_parameter_update(self, state):
self.enable_parameter_update = state
def update_osc_start(self, new_value):
"""
Descript. :
"""
if self.enable_parameter_update:
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.acq_widget_layout.osc_start_ledit.setText(\
"%.2f" % osc_start_value)
#self._acquisition_parameters.osc_start = osc_start_value
def update_kappa(self, new_value):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.kappa_ledit.setText(\
"%.2f" % float(new_value))
def update_kappa_phi(self, new_value):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.kappa_phi_ledit.setText(\
"%.2f" % float(new_value))
def use_kappa(self, state):
"""
Descript. :
"""
self.acq_widget_layout.kappa_ledit.setDisabled(state)
def use_kappa_phi(self, state):
"""
Descript. :
"""
self.acq_widget_layout.kappa_phi_ledit.setDisabled(state)
def update_num_images(self, index = None, num_images = None):
"""
Descript. :
"""
if index is not None:
if index is 0:
self._acquisition_parameters.num_images = 1
self._path_template.num_files = 1
elif index is 1:
self._acquisition_parameters.num_images = 2
self._path_template.num_files = 2
elif index is 2:
self._acquisition_parameters.num_images = 4
self._path_template.num_files = 4
if num_images:
if self.acq_widget_layout.num_images_cbox.count() > 3:
self.acq_widget_layout.num_images_cbox.removeItem(4)
if num_images is 1:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(0)
elif num_images is 2:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
elif num_images is 4:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(2)
else:
self.acq_widget_layout.num_images_cbox.addItem(str(num_images))
self.acq_widget_layout.num_images_cbox.setCurrenIndex(3)
self._path_template.num_files = num_images
def use_mad(self, state):
"""
Descript. :
"""
pass
def get_mad_energy(self):
"""
Descript. :
"""
pass
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
pass
def energy_selected(self, index):
"""
Descript. :
"""
pass
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
osc_start_validator = QtGui.QDoubleValidator(lower, upper, 4, self)
osc_range_validator = QtGui.QDoubleValidator(lower, upper, 4, self)
else:
osc_start_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
osc_range_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self._acquisition_mib.bind_value_update('osc_start',
self.acq_widget_layout.osc_start_ledit,
float,
osc_start_validator)
self._acquisition_mib.bind_value_update('osc_range',
self.acq_widget_layout.osc_range_ledit,
float,
osc_range_validator)
kappa_validator = QtGui.QDoubleValidator(-30, 180, 2, self)
self._acquisition_mib.bind_value_update('kappa',
self.acq_widget_layout.kappa_ledit,
float,
kappa_validator)
kappa_phi_validator = QtGui.QDoubleValidator(-30, 180, 2, self)
self._acquisition_mib.bind_value_update('kappa_phi',
self.acq_widget_layout.kappa_phi_ledit,
float,
kappa_phi_validator)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.3f : %0.3f" % \
(self.energy_validator.bottom(), self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
self.set_tunable_energy(beamline_setup.tunable_wavelength())
def set_energy(self, energy, wav):
"""
Descript. :
"""
#self._acquisition_parameters.energy = energy
if self.enable_parameter_update:
self.acq_widget_layout.energy_ledit.setText(\
"%.4f" % float(energy))
def update_transmission(self, transmission):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.transmission_ledit.setText(\
"%.2f" % float(transmission))
#self._acquisition_parameters.transmission = float(transmission)
def update_resolution(self, resolution):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.resolution_ledit.setText("%.3f" % float(resolution))
#self._acquisition_parameters.resolution = float(resolution)
def update_energy_limits(self, limits):
"""
Descript. :
"""
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(
"Energy limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
"""
Descript. :
"""
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(
"Transmission limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
"""
Descript. :
"""
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
"""
Descript. :
"""
if limits:
self.exp_time_validator.setBottom(limits[0])
self.exp_time_validator.setTop(limits[1])
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj._get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
# str,
# None)
def update_detector_roi_mode(self, roi_mode_index):
"""
Descript. :
"""
if self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._acquisition_mib.set_model(acquisition_parameters)
self._path_template = path_template
self.update_num_images(None, acquisition_parameters.num_images)
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def check_parameter_conflict(self):
"""
Descript. :
"""
return len(self._acquisition_mib.validate_all()) > 0
class AcquisitionWidgetSimple(QWidget):
"""
Descript. :
"""
acqParametersChangedSignal = pyqtSignal(list)
madEnergySelectedSignal = pyqtSignal(str, float, bool)
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = None):
"""
Descript. :
"""
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.value_changed_list = []
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget_layout = loadUi(os.path.join(os.path.dirname(\
__file__), "ui_files/Qt4_acquisition_widget_vertical_simple_layout.ui"))
# Layout --------------------------------------------------------------
main_layout = QVBoxLayout(self)
main_layout.addWidget(self.acq_widget_layout)
main_layout.setSpacing(0)
main_layout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.use_osc_start)
self.acq_widget_layout.num_images_cbox.activated.connect(\
self.update_num_images)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
# Other ---------------------------------------------------------------
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
0, 25, 5, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0, 10000, 6, self.acq_widget_layout.exp_time_ledit)
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def set_osc_start_limits(self, limits):
if not None in limits:
self.osc_start_validator.setRange(limits[0], limits[1], 4)
def update_osc_start(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.osc_start_cbox.hasFocus():
self.acq_widget_layout.osc_start_ledit.setText(str(new_value))
def update_kappa(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_ledit.hasFocus():
self.acq_widget_layout.kappa_ledit.setText(str(new_value))
def update_kappa_phi(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_phi_ledit.hasFocus():
self.acq_widget_layout.kappa_phi_ledit.setText(str(new_value))
def use_kappa(self, state):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
if self._beamline_setup_hwobj.diffractometer_hwobj.in_plate_mode():
state = False
self.acq_widget_layout.kappa_label.setEnabled(state)
self.acq_widget_layout.kappa_ledit.setEnabled(state)
self.acq_widget_layout.kappa_phi_label.setEnabled(state)
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def use_max_osc_range(self, state):
pass
def update_num_images(self, index = None, num_images = None):
"""
Descript. :
"""
if index is not None:
if index is 0:
self._acquisition_parameters.num_images = 1
self._path_template.num_files = 1
elif index is 1:
self._acquisition_parameters.num_images = 2
self._path_template.num_files = 2
elif index is 2:
self._acquisition_parameters.num_images = 4
self._path_template.num_files = 4
if num_images:
if self.acq_widget_layout.num_images_cbox.count() > 3:
self.acq_widget_layout.num_images_cbox.removeItem(4)
if num_images is 1:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(0)
elif num_images is 2:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
elif num_images is 4:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(2)
else:
self.acq_widget_layout.num_images_cbox.addItem(str(num_images))
self.acq_widget_layout.num_images_cbox.setCurrenIndex(3)
self._path_template.num_files = num_images
def use_mad(self, state):
"""
Descript. :
"""
pass
def get_mad_energy(self):
"""
Descript. :
"""
pass
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
pass
def energy_selected(self, index):
"""
Descript. :
"""
pass
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
self._diffractometer_hwobj = self._beamline_setup_hwobj.diffractometer_hwobj
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
self.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('osc_start',
self.acq_widget_layout.osc_start_ledit,
float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update('osc_range',
self.acq_widget_layout.osc_range_ledit,
float,
self.osc_range_validator)
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa',
self.acq_widget_layout.kappa_ledit,
float,
self.kappa_validator)
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa_phi',
self.acq_widget_layout.kappa_phi_ledit,
float,
self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_validator.setRange(lower, upper, 6)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.3f : %0.3f" % \
(self.energy_validator.bottom(), self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
self.set_tunable_energy(beamline_setup.tunable_wavelength())
if self._beamline_setup_hwobj.diffractometer_hwobj.in_plate_mode():
self.acq_widget_layout.num_images_cbox.clear()
self.acq_widget_layout.num_images_cbox.addItem("1")
self.acq_widget_layout.num_images_cbox.setCurrentIndex(0)
self.init_detector_roi_modes()
def set_energy(self, energy, wav):
"""
Descript. :
"""
if not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText(str(energy))
def update_transmission(self, transmission):
"""
Descript. :
"""
if self.acq_widget_layout.transmission_ledit.hasFocus():
self.acq_widget_layout.transmission_ledit.setText(str(transmission))
def update_resolution(self, resolution):
"""
Descript. :
"""
if not self.acq_widget_layout.resolution_ledit.hasFocus():
self.acq_widget_layout.resolution_ledit.setText(str(resolution))
def update_energy_limits(self, limits):
"""
Descript. :
"""
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(
"Energy limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
"""
Descript. :
"""
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(
"Transmission limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
"""
Descript. :
"""
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
"""
Descript. :
"""
if limits:
self.exp_time_validator.setBottom(limits[0])
self.exp_time_validator.setTop(limits[1])
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_energy(self, energy, wav):
"""
Descript. :
"""
if "energy" not in self.value_changed_list and \
not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText("%.4f" % float(energy))
def init_detector_roi_modes(self):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj._get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
# str,
# None)
def update_osc_range_limits(self, limits=None):
pass
def update_exp_time_limits(self):
exp_time_limits = self._beamline_setup_hwobj.detector_hwobj.get_exposure_time_limits()
max_osc_speed = self._diffractometer_hwobj.get_osc_max_speed()
top_limit = float(self.acq_widget_layout.osc_range_ledit.text()) / max_osc_speed
limits = (max(exp_time_limits[0], top_limit), exp_time_limits[1])
self.update_detector_exp_time_limits(limits)
def update_detector_roi_mode(self, roi_mode_index):
"""
Descript. :
"""
if self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def update_osc_range_limits(self, limits=None):
pass
def detector_roi_mode_changed(self, roi_mode_index):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._acquisition_mib.set_model(acquisition_parameters)
self._path_template = path_template
self.update_num_images(None, acquisition_parameters.num_images)
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def check_parameter_conflict(self):
"""
Descript. :
"""
return self._acquisition_mib.validate_all()
class AdvancedParametersWidget(QtGui.QWidget):
def __init__(self, parent = None, name = "advanced_parameters_widget"):
QtGui.QWidget.__init__(self, parent)
# Hardware objects ----------------------------------------------------
self._queue_model_hwobj = None
self._beamline_setup_hwobj = None
# Internal values -----------------------------------------------------
self._data_collection = None
self._tree_view_item = None
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QtGui.QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout = 'horizontal')
#self._acq_widget.setFixedHeight(170)
_snapshot_widget = QtGui.QWidget(self)
self.position_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QtGui.QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(10)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_snapshots_vlayout = QtGui.QVBoxLayout(_snapshot_widget)
_snapshots_vlayout.addWidget(self.position_widget)
_snapshots_vlayout.setContentsMargins(0, 0, 0, 0)
_snapshots_vlayout.setSpacing(2)
_snapshots_vlayout.addStretch(10)
_main_hlayout = QtGui.QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.addWidget(_snapshot_widget)
_main_hlayout.setSpacing(2)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout.addStretch(0)
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self._acq_widget.madEnergySelectedSignal.connect(\
self.mad_energy_selected)
self._acq_widget.acqParametersChangedSignal.connect(\
self.handle_path_conflict)
# Ohter ---------------------------------------------------------------
self._acq_widget.use_osc_start(False)
self._acq_widget.acq_widget_layout.mad_cbox.hide()
self._acq_widget.acq_widget_layout.energies_combo.hide()
self._acq_widget.acq_widget_layout.num_images_ledit.setEnabled(False)
self._acq_widget.acq_widget_layout.inverse_beam_cbx.hide()
self._acq_widget.acq_widget_layout.shutterless_cbx.hide()
self._acq_widget.acq_widget_layout.subwedge_size_label.hide()
self._acq_widget.acq_widget_layout.subwedge_size_ledit.hide()
def set_beamline_setup(self, bl_setup):
self._beamline_setup_hwobj = bl_setup
self._acq_widget.set_beamline_setup(bl_setup)
def _prefix_ledit_change(self, new_value):
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._data_collection.set_name(prefix)
self._tree_view_item.setText(0, self._data_collection.get_name())
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_collection.set_number(int(new_value))
self._tree_view_item.setText(0, self._data_collection.get_name())
def handle_path_conflict(self):
if self._tree_view_item:
dc_tree_widget = self._tree_view_item.listView().parent()
dc_tree_widget.check_for_path_collisions()
path_template = self._data_collection.acquisitions[0].path_template
path_conflict = self.queue_model_hwobj.\
check_for_path_collisions(path_template)
if path_conflict:
logging.getLogger("user_level_log").\
error('The current path settings will overwrite data' +\
' from another task. Correct the problem before collecting')
Qt4_widget_colors.set_widget_color(widget, Qt4_widget_colors.LIGHT_RED)
else:
Qt4_widget_colors.set_widget_color(widget, Qt4_widget_colors.LIGHT_WHITE)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_widget(self._tree_view_item)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
advanced_model = tree_view_item.get_model()
self._data_collection = advanced_model.reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
image = advanced_model.grid_object.get_snapshot()
try:
image = image.scaled(427, 320, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
except:
pass
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent = None, name = None, fl = 0, data_model = None):
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = uic.loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
self.processing_widget.findChild(QtGui.QComboBox, 'space_group_cbox').\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.findChild(QtGui.QLineEdit, 'a_ledit'),
float,
None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.findChild(QtGui.QLineEdit, 'alpha_ledit'),
float,
None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.findChild(QtGui.QLineEdit, 'b_ledit'),
float,
None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.findChild(QtGui.QLineEdit, 'beta_ledit'),
float,
None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.findChild(QtGui.QLineEdit, 'c_ledit'),
float,
None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.findChild(QtGui.QLineEdit, 'gamma_ledit'),
float,
None)
self._model_mib.bind_value_update('num_residues',
self.processing_widget.findChild(QtGui.QLineEdit, 'num_residues_ledit'),
float,
None)
self.connect(self.processing_widget.findChild(QtGui.QComboBox, 'space_group_cbox'),
QtCore.SIGNAL("activated(int)"),
self._space_group_change)
class AcquisitionWidget(QtGui.QWidget):
"""
Descript. :
"""
acqParametersChangedSignal = QtCore.pyqtSignal()
madEnergySelectedSignal = QtCore.pyqtSignal(str, float, bool)
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = 'horizontal'):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
self.enable_parameter_update = True
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = uic.loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
else:
self.acq_widget_layout = uic.loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QtGui.QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.inverse_beam_cbx.toggled.connect(\
self.set_use_inverse_beam)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
overlap_ledit = self.acq_widget_layout.findChild(\
QtGui.QLineEdit, "overlap_ledit")
if overlap_ledit is not None:
overlap_ledit.textChanged.connect(self.overlap_changed)
self.acq_widget_layout.subwedge_size_ledit.textChanged.connect(\
self.subwedge_size_ledit_change)
# Other ---------------------------------------------------------------
self.acq_widget_layout.subwedge_size_ledit.setDisabled(True)
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 4, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0.0001, 10000, 4, self)
self.first_img_validator = QtGui.QIntValidator(0, 99999, self)
self.num_img_validator = QtGui.QIntValidator(1, 99999, self)
self.disable_inverse_beam(True)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def set_enable_parameter_update(self, state):
self.enable_parameter_update = state
def update_osc_start(self, new_value):
"""
Descript. :
"""
if self.enable_parameter_update:
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.update_num_image_limits()
self.acq_widget_layout.osc_start_ledit.setText("%.2f" % osc_start_value)
#self._acquisition_parameters.osc_start = osc_start_value
def update_kappa(self, new_value):
if self.enable_parameter_update:
self.acq_widget_layout.kappa_ledit.setText("%.2f" % float(new_value))
#self._acquisition_parameters.kappa = float(new_value)
def update_kappa_phi(self, new_value):
if self.enable_parameter_update:
self.acq_widget_layout.kappa_phi_ledit.setText("%.2f" % float(new_value))
#self._acquisition_parameters.kappa_phi = float(new_value)
def use_osc_start(self, state):
self.acq_widget_layout.osc_start_label.setEnabled(state)
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def use_kappa(self, state):
self.acq_widget_layout.kappa_label.setEnabled(state)
self.acq_widget_layout.kappa_ledit.setEnabled(state)
def use_kappa_phi(self, state):
self.acq_widget_layout.kappa_phi_label.setEnabled(state)
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
self.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('osc_start',
self.acq_widget_layout.osc_start_ledit,
float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update('osc_range',
self.acq_widget_layout.osc_range_ledit,
float,
self.osc_range_validator)
if self.acq_widget_layout.findChild(QtGui.QLineEdit, "kappa_ledit"):
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa',
self.acq_widget_layout.kappa_ledit, float, self.kappa_validator)
if self.acq_widget_layout.findChild(QtGui.QLineEdit, "kappa_phi_ledit"):
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa_phi',
self.acq_widget_layout.kappa_phi_ledit, float, self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_valdidator.setRange(lower, upper, 5)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
if 'number_of_images' in limits_dict:
limits = tuple(map(int, limits_dict['number_of_images'].split(',')))
(lower, upper) = limits
self.num_img_valdidator.setRange(lower, upper)
self.first_img_valdidator.setRange(lower, upper)
self._acquisition_mib.bind_value_update('first_image',
self.acq_widget_layout.first_image_ledit,
int,
self.first_img_validator)
self._acquisition_mib.bind_value_update('num_images',
self.acq_widget_layout.num_images_ledit,
int,
self.num_img_validator)
num_passes = self.acq_widget_layout.findChild(QtGui.QLineEdit, "num_passes_ledit")
if num_passes:
self._acquisition_mib.\
bind_value_update('num_passes', num_passes, int,
QtGui.QIntValidator(1, 1000, self))
overlap_ledit = self.acq_widget_layout.findChild(QtGui.QLineEdit, "overlap_ledit")
if overlap_ledit:
self._acquisition_mib.\
bind_value_update('overlap', overlap_ledit, float,
QtGui.QDoubleValidator(-1000, 1000, 2, self))
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
self._acquisition_mib.\
bind_value_update('inverse_beam',
self.acq_widget_layout.inverse_beam_cbx,
bool,
None)
self._acquisition_mib.\
bind_value_update('shutterless',
self.acq_widget_layout.shutterless_cbx,
bool,
None)
"""self.acq_widget_layout.osc_start_ledit.setToolTip(\
"Oscillation start limits %0.2f : %0.2f" %(\
self.osc_start_validator.bottom(),
self.osc_start_validator.top()))
self.acq_widget_layout.osc_range_ledit.setToolTip(\
"Oscillation range limits %0.2f : %0.2f" %(\
self.osc_ra_validator.bottom(),
self.osc_start_validator.top()))"""
self.set_tunable_energy(beamline_setup.tunable_wavelength())
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless()
self.acq_widget_layout.shutterless_cbx.setEnabled(has_shutter_less)
self.acq_widget_layout.shutterless_cbx.setChecked(has_shutter_less)
if self._beamline_setup_hwobj.disable_num_passes():
num_passes = self.acq_widget_layout.findChild(QtGui.QLineEdit, "num_passes_ledit")
if num_passes:
num_passes.setDisabled(True)
def first_image_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._path_template.start_num = int(new_value)
widget = self.acq_widget_layout.first_image_ledit
self.acqParametersChangedSignal.emit()
def num_images_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._path_template.num_files = int(new_value)
widget = self.acq_widget_layout.num_images_ledit
self.acqParametersChangedSignal.emit()
def overlap_changed(self, new_value):
"""
Descript. :
"""
if self._beamline_setup_hwobj:
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless()
else:
has_shutter_less = True
if has_shutter_less:
try:
new_value = float(new_value)
except ValueError:
pass
if new_value != 0:
self.acq_widget_layout.shutterless_cbx.setEnabled(False)
self.acq_widget_layout.shutterless_cbx.setChecked(False)
self._acquisition_parameters.shutterless = False
else:
self.acq_widget_layout.shutterless_cbx.setEnabled(True)
self.acq_widget_layout.shutterless_cbx.setChecked(True)
self._acquisition_parameters.shutterless = True
def use_mad(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.setEnabled(state)
if state:
(name, energy) = self.get_mad_energy()
if energy != 0:
self.set_energy(energy, 0)
self.madEnergySelectedSignal.emit(name, energy, state)
else:
self.set_energy(self.previous_energy, 0)
energy = self._beamline_setup_hwobj.energy_hwobj.getCurrentEnergy()
self.madEnergySelectedSignal.emit('', self.previous_energy, state)
def set_use_inverse_beam(self, state):
"""
Descript. :
"""
if state:
self.acq_widget_layout.subwedge_size_ledit.setEnabled(True)
else:
self.acq_widget_layout.subwedge_size_ledit.setDisabled(True)
def use_inverse_beam(self):
"""
Descript. :
"""
return self.acq_widget_layout.inverse_beam_cbx.isChecked()
def get_num_subwedges(self):
"""
Descript. :
"""
return int(self.acq_widget_layout.subwedge_size_ledit.text())
def subwedge_size_ledit_change(self, new_value):
"""
Descript. :
"""
accept_input = False
if str(new_value).isdigit() and \
int(new_value) < self._acquisition_parameters.num_images:
accept_input = True
if accept_input:
Qt4_widget_colors.set_widget_color(
self.acq_widget_layout.subwedge_size_ledit,
Qt4_widget_colors.WHITE,
QtGui.QPalette.Base)
else:
Qt4_widget_colors.set_widget_color(\
self.acq_widget_layout.subwedge_size_ledit,
Qt4_widget_colors.LIGHT_RED,
QtGui.QPalette.Base)
def get_mad_energy(self):
"""
Descript. :
"""
energy_str = str(self.acq_widget_layout.energies_combo.currentText())
(name, value) = energy_str.split(':')
name = name.strip()
value = value.strip()
value = 0 if (value == '-') else float(value)
return (name, value)
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.clear()
inflection = ('ip: %.4f' % energy_scan_result.inflection) if \
energy_scan_result.inflection else 'ip: -'
peak = ('pk: %.4f' % energy_scan_result.peak) if \
energy_scan_result.peak else 'pk: -'
first_remote = ('rm1: %.4f' % energy_scan_result.first_remote) if \
energy_scan_result.first_remote else 'rm1: -'
second_remote = ('rm2: %.4f' % energy_scan_result.second_remote) if \
energy_scan_result.second_remote else 'rm2: -'
self.acq_widget_layout.energies_combo.\
addItems([inflection, peak, first_remote, second_remote])
def energy_selected(self, index):
"""
Descript. :
"""
if self.acq_widget_layout.mad_cbox.isChecked():
(name, energy) = self.get_mad_energy()
if energy != 0:
self.set_energy(energy, 0)
self.madEnergySelectedSignal.emit(name, energy, True)
def set_energy(self, energy, wav):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setText("%.4f" % float(energy))
def update_transmission(self, transmission):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.transmission_ledit.setText("%.2f" % float(transmission))
def update_resolution(self, resolution):
"""
Descript. :
"""
if self.enable_parameter_update:
self.acq_widget_layout.resolution_ledit.setText("%.3f" % float(resolution))
def update_energy_limits(self, limits):
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(\
"Transmission limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
if limits:
self.exp_time_validator.setRange(limits[0], limits[1], 4)
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_osc_range_limits(self, exp_time):
osc_range = 40.0 * exp_time
self.osc_range_validator.setRange(0, osc_range, 4)
self.acq_widget_layout.osc_range_ledit.setToolTip(
"Oscillation range limits %0.2f : %0.2f" %(0, osc_range))
self._acquisition_mib.validate_all()
def update_num_image_limits(self):
try:
osc_start = float(self.acq_widget_layout.osc_start_ledit.text())
osc_range = float(self.acq_widget_layout.osc_range_ledit.text())
except ValueError:
return
if osc_range == 0:
return
if self._beamline_setup_hwobj.diffractometer_hwobj.in_plate_mode():
num_image_limit = int((self.osc_start_validator.top() - osc_start) / osc_range)
else:
num_image_limit = 99999
self.num_img_validator.setTop(num_image_limit)
self.acq_widget_layout.num_images_ledit.setToolTip(\
"Number of frames limit : %d" % num_image_limit)
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj._get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
## str,
# None)
def update_detector_roi_mode(self, roi_mode_index):
if self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._path_template = path_template
self._acquisition_mib.set_model(acquisition_parameters)
#Update mad widgets
mad = True if self._path_template.mad_prefix != '' else False
if mad:
mad_prefix = self._path_template.mad_prefix
index = MAD_ENERGY_COMBO_NAMES[mad_prefix]
self.acq_widget_layout.energies_combo.setCurrentIndex(index)
self.acq_widget_layout.mad_cbox.setChecked(True)
self.acq_widget_layout.energies_combo.setEnabled(True)
else:
self.acq_widget_layout.mad_cbox.setChecked(False)
self.acq_widget_layout.energies_combo.setEnabled(False)
self.acq_widget_layout.energies_combo.setCurrentIndex(0)
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
self.acq_widget_layout.mad_cbox.setEnabled(state)
self.acq_widget_layout.energies_combo.setEnabled(state)
def disable_inverse_beam(self, state):
"""
Descript. :
"""
self.acq_widget_layout.inverse_beam_cbx.setDisabled(state)
self.acq_widget_layout.subwedge_size_label.setDisabled(state)
self.acq_widget_layout.subwedge_size_ledit.setDisabled(state)
def hide_aperture(self, state):
"""
Descript. :
"""
pass
class CharParametersWidget(QtGui.QWidget):
"""
Descript. :
"""
def __init__(self, parent=None, name="parameter_widget"):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._char = None
self._char_params = queue_model_objects.CharacterisationParameters()
self._char_params_mib = DataModelInputBinder(self._char_params)
self._tree_view_item = None
self.previous_energy = None
self.add_dc_cb = None
# Graphic elements ----------------------------------------------------
rone_widget = QtGui.QWidget(self)
self.reference_img_widget = ReferenceImageWidget(rone_widget)
self.acq_widget = self.reference_img_widget.acq_widget
self.path_widget = self.reference_img_widget.path_widget
self.position_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
self.position_widget.setMinimumSize(450, 340)
rtwo_widget = QtGui.QWidget(self)
self.char_type_widget = CharTypeWidget(rtwo_widget)
self.routine_dc_widget = self.char_type_widget.routine_dc_page
self.sad_widget = self.char_type_widget.sad_page
self.rad_dmg_char_widget = self.char_type_widget.rad_damage_page
self.opt_parameters_widget = OptimisationParametersWidgetLayout(self)
rtree_widget = QtGui.QWidget(self)
self.rad_dmg_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_radiation_damage_model_widget_layout.ui'))
self.vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
# Layout --------------------------------------------------------------
rone_widget_layout = QtGui.QHBoxLayout(self)
rone_widget_layout.addWidget(self.reference_img_widget)
rone_widget_layout.addWidget(self.position_widget)
#rone_widget_layout.addStretch(0)
rone_widget_layout.setSpacing(2)
rone_widget_layout.setContentsMargins(0, 0, 0, 0)
rone_widget.setLayout(rone_widget_layout)
rtwo_widget_layout = QtGui.QHBoxLayout(self)
rtwo_widget_layout.addWidget(self.char_type_widget)
rtwo_widget_layout.addWidget(self.opt_parameters_widget)
rtwo_widget_layout.addStretch(0)
rtwo_widget_layout.setSpacing(2)
rtwo_widget_layout.setContentsMargins(0, 0, 0, 0)
rtwo_widget.setLayout(rtwo_widget_layout)
rtree_widget_layout = QtGui.QHBoxLayout(self)
rtree_widget_layout.addWidget(self.rad_dmg_widget)
rtree_widget_layout.addWidget(self.vertical_dimension_widget)
rtree_widget_layout.addStretch(0)
rtree_widget_layout.setSpacing(2)
rtree_widget_layout.setContentsMargins(0, 0, 0, 0)
rtree_widget.setLayout(rtree_widget_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(rone_widget)
_main_vlayout.addWidget(rtwo_widget)
_main_vlayout.addWidget(rtree_widget)
_main_vlayout.setSpacing(2)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies -------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.toggle_permitted_range(self.opt_parameters_widget.\
opt_param_widget.permitted_range_cbx.isChecked())
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx.\
toggled.connect(self.toggle_permitted_range)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'min_dose', self.routine_dc_widget.dose_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_time', self.routine_dc_widget.time_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_min_dose', self.routine_dc_widget.min_dose_radio, bool, None)
self._char_params_mib.bind_value_update(
'use_min_time', self.routine_dc_widget.min_time_radio, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self.routine_dc_widget.radiation_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'auto_res', self.sad_widget.automatic_resolution_radio, bool, None)
self._char_params_mib.bind_value_update(
'sad_res', self.sad_widget.sad_resolution_ledit, float,
QtGui.QDoubleValidator(0.5, 20, 3, self))
self._char_params_mib.bind_value_update(
'opt_sad', self.sad_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'determine_rad_params', self.rad_dmg_char_widget.rad_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'burn_osc_start', self.rad_dmg_char_widget.burn_osc_start_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'burn_osc_interval',
self.rad_dmg_char_widget.burn_osc_interval_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'use_aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(\
'aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_i_sigma',
self.opt_parameters_widget.opt_param_widget.i_over_sigma_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_completness',
self.opt_parameters_widget.opt_param_widget.aimed_comp_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'strategy_complexity',
self.opt_parameters_widget.opt_param_widget.start_comp_cbox, int,
None)
self._char_params_mib.bind_value_update(
'use_permitted_rotation',
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'permitted_phi_start',
self.opt_parameters_widget.opt_param_widget.phi_start_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'permitted_phi_end',
self.opt_parameters_widget.opt_param_widget.phi_end_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'low_res_pass_strat',
self.opt_parameters_widget.opt_param_widget.low_res_pass_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'rad_suscept', self.rad_dmg_widget.sensetivity_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'beta', self.rad_dmg_widget.beta_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'gamma', self.rad_dmg_widget.gamma_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vdim', self.vertical_dimension_widget.max_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vdim', self.vertical_dimension_widget.min_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vphi', self.vertical_dimension_widget.min_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vphi', self.vertical_dimension_widget.max_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
#self._char_params_mib.bind_value_update('space_group',
# self.vertical_dimension_widget.space_group_ledit,
# str,
# None)
self.vertical_dimension_widget.space_group_ledit.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self.char_type_widget.charact_type_tbox.currentChanged.connect(\
self.update_char_type)
self.rad_dmg_char_widget.rad_damage_cbx.toggled.connect(\
self.enable_opt_parameters_widget)
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx.\
toggled.connect(self.enable_maximum_res_ledit)
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx.\
toggled.connect(self.enable_aimed_mult_ledit)
self.path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#QtCore.QObject.connect(QtGui.QApplication, QtCore.SIGNAL('tab_changed'),
# self.tab_changed)
def _space_group_change(self, index):
"""
Descript. :
"""
self._char_params.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
"""
Descript. :
"""
index = 0
if space_group in queue_model_enumerables.XTAL_SPACEGROUPS:
index = queue_model_enumerables.XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self.vertical_dimension_widget.space_group_ledit.setCurrentIndex(index)
def _prefix_ledit_change(self, new_value):
"""
Descript. :
"""
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._char.set_name(prefix)
self._tree_view_item.setText(0, self._char.get_name())
def _run_number_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._char.set_number(int(new_value))
self._tree_view_item.setText(0, self._char.get_name())
def enable_aimed_mult_ledit(self, state):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit.setEnabled(
state)
def enable_maximum_res_ledit(self, state):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit.setEnabled(
state)
def update_char_type(self, index):
"""
Descript. :
"""
self._char_params.experiment_type = index
def toggle_permitted_range(self, status):
"""
Descript. :
"""
self.opt_parameters_widget.opt_param_widget.phi_start_ledit.setEnabled(
status)
self.opt_parameters_widget.opt_param_widget.phi_end_ledit.setEnabled(
status)
def enable_opt_parameters_widget(self, state):
"""
Descript. :
"""
if not self._char.is_executed():
self.opt_parameters_widget.setEnabled(not state)
else:
self.opt_parameters_widget.setEnabled(False)
def tab_changed(self):
"""
Descript. :
"""
if self._tree_view_item:
self.populate_parameter_widget(self._tree_view_item)
def set_enabled(self, state):
"""
Descript. :
"""
self.char_type_widget.setEnabled(state)
self.routine_dc_widget.setEnabled(state)
self.sad_widget.setEnabled(state)
self.rad_dmg_char_widget.setEnabled(state)
self.reference_img_widget.setEnabled(state)
self.acq_widget.setEnabled(state)
self.path_widget.setEnabled(state)
self.opt_parameters_widget.setEnabled(state)
self.rad_dmg_widget.setEnabled(state)
self.vertical_dimension_widget.setEnabled(state)
def populate_parameter_widget(self, tree_view_item):
"""
Descript. :
"""
self._tree_view_item = tree_view_item
self._char = tree_view_item.get_model()
self._data_collection = self._char.reference_image_collection
self._char_params = self._char.characterisation_parameters
self._char_params_mib.set_model(self._char.characterisation_parameters)
self._set_space_group(self._char_params.space_group)
self.acq_widget.update_data_model(self._char.reference_image_collection.\
acquisitions[0].acquisition_parameters,
self._char.reference_image_collection.\
acquisitions[0].path_template)
self.path_widget.update_data_model(self._char.reference_image_collection.\
acquisitions[0].path_template)
if self._data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = self._data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
self.toggle_permitted_range(self._char_params.use_permitted_rotation)
self.enable_opt_parameters_widget(
self._char_params.determine_rad_params)
self.enable_maximum_res_ledit(self._char_params.use_aimed_resolution)
self.enable_aimed_mult_ledit(self._char_params.use_aimed_multiplicity)
item = self.char_type_widget.charact_type_tbox.\
widget(self._char_params.experiment_type)
self.char_type_widget.charact_type_tbox.setCurrentWidget(item)
self.char_type_widget.toggle_time_dose()
crystal = self._char.reference_image_collection.crystal
self.acq_widget.set_energies(crystal.energy_scan_result)
def set_beamline_setup(self, bl_setup):
"""
Descript. :
"""
self.acq_widget.set_beamline_setup(bl_setup)
class AdvancedParametersWidget(QWidget):
def __init__(self, parent = None, name = "advanced_parameters_widget"):
QWidget.__init__(self, parent)
# Hardware objects ----------------------------------------------------
self._queue_model_hwobj = None
self._beamline_setup_hwobj = None
# Internal values -----------------------------------------------------
self._data_collection = None
self._tree_view_item = None
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout = 'horizontal')
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(10)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_main_hlayout = QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.setSpacing(2)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout.addStretch(0)
# Qt signal/slot connections ------------------------------------------
#self._acq_widget.acqParametersChangedSignal.\
# connect(self.acq_parameters_changed)
#self._data_path_widget.pathTemplateChangedSignal.\
# connect(self.acq_parameters_changed)
self._acq_widget.madEnergySelectedSignal.connect(\
self.mad_energy_selected)
# Ohter ---------------------------------------------------------------
self._acq_widget.use_osc_start(False)
self._acq_widget.acq_widget_layout.mad_cbox.hide()
self._acq_widget.acq_widget_layout.energies_combo.hide()
self._acq_widget.acq_widget_layout.shutterless_cbx.hide()
def set_beamline_setup(self, bl_setup):
self._beamline_setup_hwobj = bl_setup
self._acq_widget.set_beamline_setup(bl_setup)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_widget(self._tree_view_item)
def populate_widget(self, tree_view_item, data_collection):
self._tree_view_item = tree_view_item
self._data_collection = data_collection
#if isinstance(tree_view_item, Qt4_queue_item.XrayCenteringQueueItem):
# self._data_collection = tree_view_item.get_model().reference_image_collection
#else:
# self._data_collection = tree_view_item.get_model()
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
self._acq_widget.acq_widget_layout.num_images_ledit.setDisabled(data_collection.is_mesh())
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def __init__(self, parent=None, name=None, fl=0, acq_params=None,
path_template=None, layout='horizontal'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# If the acq. widget is used with grids then total osc range is not
# equal to num_images * osc_range, but num_images_per_line * osc_range
# For grids the osc total range is updated when a grid is selected
self.grid_mode = False
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.use_osc_start(False)
else:
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.fix_osc_start)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.osc_start_ledit.textEdited.connect(\
self.osc_start_ledit_changed)
self.acq_widget_layout.osc_range_ledit.textEdited.connect(\
self.osc_range_per_frame_ledit_changed)
self.acq_widget_layout.osc_total_range_ledit.textEdited.connect(\
self.osc_total_range_ledit_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
self.acq_widget_layout.kappa_ledit.textEdited.connect(\
self.kappa_ledit_changed)
self.acq_widget_layout.kappa_phi_ledit.textEdited.connect(\
self.kappa_phi_ledit_changed)
if self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit"):
self.acq_widget_layout.overlap_ledit.textChanged.connect(\
self.overlap_changed)
if self.acq_widget_layout.findChild(QCheckBox, "max_osc_range_cbx"):
self.acq_widget_layout.max_osc_range_cbx.toggled.connect(\
self.max_osc_range_toggled)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(\
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_per_frame_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.osc_total_range_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_total_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.first_img_validator = QIntValidator(\
0, 99999, self.acq_widget_layout.first_image_ledit)
self.num_img_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
class AcquisitionStillWidget(QWidget):
acqParametersChangedSignal = pyqtSignal(list)
def __init__(self, parent=None, name=None, fl=0, acq_params=None,
path_template=None, layout='vertical'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_still_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.num_triggers_ledit.textChanged.connect(\
self.num_triggers_ledit_changed)
self.acq_widget_layout.num_images_per_trigger_ledit.textChanged.connect(\
self.num_images_per_trigger_ledit_changed)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.num_triggers_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_triggers_ledit)
self.num_images_per_trigger_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_per_trigger_ledit)
self.num_img_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def use_osc_start(self, status):
pass
def use_max_osc_range(self, status):
pass
def use_kappa(self, status):
pass
def set_beamline_setup(self, beamline_setup):
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
self._diffractometer_hwobj = self._beamline_setup_hwobj.diffractometer_hwobj
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_validator.setRange(lower, upper, 6)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
self._acquisition_mib.bind_value_update('num_triggers',
self.acq_widget_layout.num_triggers_ledit,
int,
self.num_triggers_validator)
self._acquisition_mib.bind_value_update('num_images_per_trigger',
self.acq_widget_layout.num_images_per_trigger_ledit,
int,
self.num_images_per_trigger_validator)
if 'number_of_images' in limits_dict:
limits = tuple(map(float, limits_dict['number_of_images'].split(',')))
(lower, upper) = limits
self.num_img_validator.setRange(lower, upper)
self._acquisition_mib.bind_value_update('num_images',
self.acq_widget_layout.num_images_ledit,
int,
self.num_img_validator)
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.update_energy_limits((self.energy_validator.bottom(),
self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self.update_transmission_limits((self.transmission_validator.bottom(),
self.transmission_validator.top()))
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless()
self.init_detector_roi_modes()
def exposure_time_ledit_changed(self, new_values):
self.emit_acq_parameters_changed()
def energy_ledit_changed(self, new_value):
if "energy" not in self.value_changed_list:
self.value_changed_list.append("energy")
self.emit_acq_parameters_changed()
def update_energy(self, energy, wav=None):
if "energy" not in self.value_changed_list and \
not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText(str(energy))
self.emit_acq_parameters_changed()
def transmission_ledit_changed(self, transmission):
if "transmission" not in self.value_changed_list:
self.value_changed_list.append("transmission")
self.emit_acq_parameters_changed()
def update_transmission(self, transmission):
if "transmission" not in self.value_changed_list:
self.acq_widget_layout.transmission_ledit.setText(str(transmission))
self.emit_acq_parameters_changed()
def resolution_ledit_changed(self, resolution):
if "resolution" not in self.value_changed_list:
self.value_changed_list.append("resolution")
self.emit_acq_parameters_changed()
def update_resolution(self, resolution):
if "resolution" not in self.value_changed_list and \
not self.acq_widget_layout.resolution_ledit.hasFocus():
self.acq_widget_layout.resolution_ledit.setText(str(resolution))
self.emit_acq_parameters_changed()
def update_energy_limits(self, limits):
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.4f : %0.4f keV\n" % \
(limits[0], limits[1]) + \
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(\
"Transmission limits %0.2f : %0.2f %%\n" % \
(limits[0], limits[1]) + \
"2 digits precision.")
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.4f : %0.4f %s\n" % \
(limits[0], limits[1], chr(197)) +
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
if limits:
self.exp_time_validator.setRange(limits[0], limits[1], 6)
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.6f s : %0.1f s\n" % \
(limits[0], limits[1]) + \
"6 digits precision.")
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj.detector_hwobj.get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(len(roi_modes) > 1)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(len(roi_modes) > 1)
def update_detector_roi_mode(self, roi_mode_index):
if roi_mode_index is not None and \
self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def update_osc_range_per_frame_limits(self):
pass
def update_exp_time_limits(self):
pass
def update_osc_start(self, value):
pass
def update_kappa(self, value):
pass
def update_kappa_phi(self, value):
pass
def update_data_model(self, acquisition_parameters, path_template):
self._acquisition_parameters = acquisition_parameters
self._path_template = path_template
self._acquisition_mib.set_model(acquisition_parameters)
self.emit_acq_parameters_changed()
def check_parameter_conflict(self):
return self._acquisition_mib.validate_all()
def emit_acq_parameters_changed(self):
self.acqParametersChangedSignal.emit(self._acquisition_mib.validate_all())
def set_energies(self, energies):
pass
def num_triggers_ledit_changed(self, value):
if "num_triggers" not in self.value_changed_list:
self.value_changed_list.append("num_triggers")
self.update_num_images()
self.emit_acq_parameters_changed()
def num_images_per_trigger_ledit_changed(self, values):
if "num_images_per_trigger" not in self.value_changed_list:
self.value_changed_list.append("num_images_per_trigger")
self.update_num_images()
self.emit_acq_parameters_changed()
def update_num_images(self):
self.acq_widget_layout.num_images_ledit.setText(\
str(self._acquisition_parameters.num_triggers * \
self._acquisition_parameters.num_images_per_trigger))
class AdvancedParametersWidget(QtGui.QWidget):
def __init__(self, parent=None, name="advanced_parameters_widget"):
QtGui.QWidget.__init__(self, parent)
# Hardware objects ----------------------------------------------------
self._queue_model_hwobj = None
self._beamline_setup_hwobj = None
# Internal values -----------------------------------------------------
self._data_collection = None
self._tree_view_item = None
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QtGui.QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout='horizontal')
#self._acq_widget.setFixedHeight(170)
_snapshot_widget = QtGui.QWidget(self)
self.position_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QtGui.QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(10)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_snapshots_vlayout = QtGui.QVBoxLayout(_snapshot_widget)
_snapshots_vlayout.addWidget(self.position_widget)
_snapshots_vlayout.setContentsMargins(0, 0, 0, 0)
_snapshots_vlayout.setSpacing(2)
_snapshots_vlayout.addStretch(10)
_main_hlayout = QtGui.QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.addWidget(_snapshot_widget)
_main_hlayout.setSpacing(2)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout.addStretch(0)
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self._acq_widget.madEnergySelectedSignal.connect(\
self.mad_energy_selected)
self._acq_widget.acqParametersChangedSignal.connect(\
self.handle_path_conflict)
# Ohter ---------------------------------------------------------------
self._acq_widget.use_osc_start(False)
self._acq_widget.acq_widget_layout.mad_cbox.hide()
self._acq_widget.acq_widget_layout.energies_combo.hide()
self._acq_widget.acq_widget_layout.num_images_ledit.setEnabled(False)
self._acq_widget.acq_widget_layout.inverse_beam_cbx.hide()
self._acq_widget.acq_widget_layout.shutterless_cbx.hide()
self._acq_widget.acq_widget_layout.subwedge_size_label.hide()
self._acq_widget.acq_widget_layout.subwedge_size_ledit.hide()
def set_beamline_setup(self, bl_setup):
self._beamline_setup_hwobj = bl_setup
self._acq_widget.set_beamline_setup(bl_setup)
def _prefix_ledit_change(self, new_value):
prefix = self._data_collection.acquisitions[0].\
path_template.get_prefix()
self._data_collection.set_name(prefix)
self._tree_view_item.setText(0, self._data_collection.get_name())
def _run_number_ledit_change(self, new_value):
if str(new_value).isdigit():
self._data_collection.set_number(int(new_value))
self._tree_view_item.setText(0, self._data_collection.get_name())
def handle_path_conflict(self):
if self._tree_view_item:
dc_tree_widget = self._tree_view_item.listView().parent()
dc_tree_widget.check_for_path_collisions()
path_template = self._data_collection.acquisitions[0].path_template
path_conflict = self.queue_model_hwobj.\
check_for_path_collisions(path_template)
if path_conflict:
logging.getLogger("user_level_log").\
error('The current path settings will overwrite data' +\
' from another task. Correct the problem before collecting')
Qt4_widget_colors.set_widget_color(widget,
Qt4_widget_colors.LIGHT_RED)
else:
Qt4_widget_colors.set_widget_color(
widget, Qt4_widget_colors.LIGHT_WHITE)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_widget(self._tree_view_item)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
advanced_model = tree_view_item.get_model()
self._data_collection = advanced_model.reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
image = advanced_model.grid_object.get_snapshot()
try:
image = image.scaled(427, 320, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
except:
pass
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
class AdvancedParametersWidget(QWidget):
def __init__(self, parent = None, name = "advanced_parameters_widget"):
QWidget.__init__(self, parent)
# Hardware objects ----------------------------------------------------
self._queue_model_hwobj = None
self._beamline_setup_hwobj = None
# Internal values -----------------------------------------------------
self._data_collection = None
self._tree_view_item = None
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
_dc_parameters_widget = QWidget(self)
self._data_path_widget = DataPathWidget(_dc_parameters_widget)
self._acq_widget = AcquisitionWidget(_dc_parameters_widget,
layout = 'horizontal')
# Layout --------------------------------------------------------------
_dc_parameters_widget_layout = QVBoxLayout(_dc_parameters_widget)
_dc_parameters_widget_layout.addWidget(self._data_path_widget)
_dc_parameters_widget_layout.addWidget(self._acq_widget)
_dc_parameters_widget_layout.setSpacing(2)
_dc_parameters_widget_layout.addStretch(10)
_dc_parameters_widget_layout.setContentsMargins(0, 0, 0, 0)
_main_hlayout = QHBoxLayout(self)
_main_hlayout.addWidget(_dc_parameters_widget)
_main_hlayout.setSpacing(2)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout.addStretch(0)
# Qt signal/slot connections ------------------------------------------
#self._acq_widget.acqParametersChangedSignal.\
# connect(self.acq_parameters_changed)
#self._data_path_widget.pathTemplateChangedSignal.\
# connect(self.acq_parameters_changed)
self._acq_widget.madEnergySelectedSignal.connect(\
self.mad_energy_selected)
# Ohter ---------------------------------------------------------------
self._acq_widget.use_osc_start(False)
self._acq_widget.acq_widget_layout.mad_cbox.hide()
self._acq_widget.acq_widget_layout.energies_combo.hide()
self._acq_widget.acq_widget_layout.num_images_ledit.setEnabled(False)
self._acq_widget.acq_widget_layout.shutterless_cbx.hide()
def set_beamline_setup(self, bl_setup):
self._beamline_setup_hwobj = bl_setup
self._acq_widget.set_beamline_setup(bl_setup)
def mad_energy_selected(self, name, energy, state):
path_template = self._data_collection.acquisitions[0].path_template
if state:
path_template.mad_prefix = name
else:
path_template.mad_prefix = ''
run_number = self._beamline_setup_hwobj.queue_model_hwobj.\
get_next_run_number(path_template)
self._data_path_widget.set_run_number(run_number)
self._data_path_widget.set_prefix(path_template.base_prefix)
model = self._tree_view_item.get_model()
model.set_name(path_template.get_prefix())
self._tree_view_item.setText(0, model.get_name())
def tab_changed(self):
if self._tree_view_item:
self.populate_widget(self._tree_view_item)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
if isinstance(tree_view_item, Qt4_queue_item.XrayCenteringQueueItem):
self._data_collection = tree_view_item.get_model().reference_image_collection
else:
self._data_collection = tree_view_item.get_model()
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def __init__(self, parent=None, name=None, fl=0, acq_params=None,
path_template=None, layout='vertical'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_still_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.num_triggers_ledit.textChanged.connect(\
self.num_triggers_ledit_changed)
self.acq_widget_layout.num_images_per_trigger_ledit.textChanged.connect(\
self.num_images_per_trigger_ledit_changed)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.num_triggers_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_triggers_ledit)
self.num_images_per_trigger_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_per_trigger_ledit)
self.num_img_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
class AcquisitionWidgetSimple(QtGui.QWidget):
"""
Descript. :
"""
acqParametersChangedSignal = QtCore.pyqtSignal()
madEnergySelectedSignal = QtCore.pyqtSignal(str, float, bool)
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = None):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget_layout = uic.loadUi(os.path.join(os.path.dirname(\
__file__), "ui_files/Qt4_acquisition_widget_vertical_simple_layout.ui"))
# Layout --------------------------------------------------------------
main_layout = QtGui.QVBoxLayout(self)
main_layout.addWidget(self.acq_widget_layout)
main_layout.setSpacing(0)
main_layout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.use_osc_start)
self.acq_widget_layout.num_images_cbox.activated.connect(\
self.update_num_images)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
# Other ---------------------------------------------------------------
self.osc_start_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 5, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0, 10000, 5, self)
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def set_osc_start_limits(self, limits):
if not None in limits:
self.osc_start_validator.setRange(limits[0], limits[1], 4)
def update_osc_start(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.osc_start_cbox.hasFocus():
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.acq_widget_layout.osc_start_ledit.setText(\
"%.2f" % osc_start_value)
#self._acquisition_parameters.osc_start = osc_start_value
def update_kappa(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_ledit.hasFocus():
self.acq_widget_layout.kappa_ledit.setText(\
"%.2f" % float(new_value))
def update_kappa_phi(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_phi_ledit.hasFocus():
self.acq_widget_layout.kappa_phi_ledit.setText(\
"%.2f" % float(new_value))
def use_kappa(self, state):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
if self._beamline_setup_hwobj.diffractometer_hwobj.in_plate_mode():
state = False
self.acq_widget_layout.kappa_label.setEnabled(state)
self.acq_widget_layout.kappa_ledit.setEnabled(state)
self.acq_widget_layout.kappa_phi_label.setEnabled(state)
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def update_num_images(self, index = None, num_images = None):
"""
Descript. :
"""
if index is not None:
if index is 0:
self._acquisition_parameters.num_images = 1
self._path_template.num_files = 1
elif index is 1:
self._acquisition_parameters.num_images = 2
self._path_template.num_files = 2
elif index is 2:
self._acquisition_parameters.num_images = 4
self._path_template.num_files = 4
if num_images:
if self.acq_widget_layout.num_images_cbox.count() > 3:
self.acq_widget_layout.num_images_cbox.removeItem(4)
if num_images is 1:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(0)
elif num_images is 2:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(1)
elif num_images is 4:
self.acq_widget_layout.num_images_cbox.setCurrentIndex(2)
else:
self.acq_widget_layout.num_images_cbox.addItem(str(num_images))
self.acq_widget_layout.num_images_cbox.setCurrenIndex(3)
self._path_template.num_files = num_images
def use_mad(self, state):
"""
Descript. :
"""
pass
def get_mad_energy(self):
"""
Descript. :
"""
pass
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
pass
def energy_selected(self, index):
"""
Descript. :
"""
pass
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
elf.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('osc_start',
self.acq_widget_layout.osc_start_ledit,
float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update('osc_range',
self.acq_widget_layout.osc_range_ledit,
float,
self.osc_range_validator)
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa',
self.acq_widget_layout.kappa_ledit,
float,
self.kappa_validator)
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa_phi',
self.acq_widget_layout.kappa_phi_ledit,
float,
self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_validator.setRange(lower, upper, 5)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.3f : %0.3f" % \
(self.energy_validator.bottom(), self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
self.set_tunable_energy(beamline_setup.tunable_wavelength())
def set_energy(self, energy, wav):
"""
Descript. :
"""
if not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText(\
"%.4f" % float(energy))
def update_transmission(self, transmission):
"""
Descript. :
"""
if self.acq_widget_layout.transmission_ledit.hasFocus():
self.acq_widget_layout.transmission_ledit.setText(\
"%.2f" % float(transmission))
def update_resolution(self, resolution):
"""
Descript. :
"""
if not self.acq_widget_layout.resolution_ledit.hasFocus():
self.acq_widget_layout.resolution_ledit.setText(\
"%.3f" % float(resolution))
def update_energy_limits(self, limits):
"""
Descript. :
"""
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(
"Energy limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
"""
Descript. :
"""
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(
"Transmission limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
"""
Descript. :
"""
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
"""
Descript. :
"""
if limits:
self.exp_time_validator.setBottom(limits[0])
self.exp_time_validator.setTop(limits[1])
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj._get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
# str,
# None)
def update_detector_roi_mode(self, roi_mode_index):
"""
Descript. :
"""
if self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._acquisition_mib.set_model(acquisition_parameters)
self._path_template = path_template
self.update_num_images(None, acquisition_parameters.num_images)
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def check_parameter_conflict(self):
"""
Descript. :
"""
return len(self._acquisition_mib.validate_all()) > 0
class AcquisitionWidget(QtGui.QWidget):
"""
Descript. :
"""
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.acq_widget.inverse_beam_cbx.hide()
self.acq_widget.subwedge_size_label.hide()
self.acq_widget.subwedge_size_ledit.hide()
else:
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.acq_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget.energies_combo.activated.connect(self.energy_selected)
self.acq_widget.mad_cbox.toggled.connect(self.use_mad)
self.acq_widget.inverse_beam_cbx.toggled.connect(
self.set_use_inverse_beam)
self.acq_widget.first_image_ledit.textChanged.connect(
self.first_image_ledit_change)
self.acq_widget.num_images_ledit.textChanged.connect(
self.num_images_ledit_change)
overlap_ledit = self.acq_widget.findChild(QtGui.QLineEdit,
"overlap_ledit")
if overlap_ledit is not None:
overlap_ledit.textChanged.connect(self.overlap_changed)
self.acq_widget.subwedge_size_ledit.textChanged.connect(
self.subwedge_size_ledit_change)
self.acq_widget.osc_start_cbox.toggled.connect(
self.osc_start_cbox_click)
# Other ---------------------------------------------------------------
self.acq_widget.subwedge_size_ledit.setDisabled(True)
self.acq_widget.energies_combo.setDisabled(True)
self.acq_widget.energies_combo.addItems(
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.acq_widget.osc_start_ledit.setEnabled(False)
self.osc_start_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 4, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(
0.0001, 10000, 4, self)
self.first_img_validator = QtGui.QIntValidator(0, 99999, self)
self.num_img_validator = QtGui.QIntValidator(1, 99999, self)
def osc_start_cbox_click(self, state):
"""
Descript. :
"""
self.update_osc_start(
self._beamline_setup_hwobj._get_omega_axis_position())
self.acq_widget.osc_start_ledit.setEnabled(state)
def update_osc_start(self, new_value):
"""
Descript. :
"""
if not self.acq_widget.osc_start_cbox.isChecked():
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.acq_widget.osc_start_ledit.setText("%.2f" % osc_start_value)
self._acquisition_parameters.osc_start = osc_start_value
def update_kappa(self, new_value):
self.acq_widget.kappa_ledit.setText("%.2f" % float(new_value))
#self._acquisition_parameters.kappa = float(new_value)
def update_kappa_phi(self, new_value):
self.acq_widget.kappa_phi_ledit.setText("%.2f" % float(new_value))
#self._acquisition_parameters.kappa_phi = float(new_value)
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget.osc_start_cbox.setChecked(state)
self.acq_widget.osc_start_cbox.setDisabled(state)
def use_kappa(self, state):
if self._beamline_setup.diffractometer_hwobj.get_head_type() == \
self._beamline_setup.diffractometer_hwobj.PLATE:
state = False
self.acq_widget_layout.kappa_ledit.setEnabled(state)
def use_kappa_phi(self, state):
if self._beamline_setup.diffractometer_hwobj.get_head_type() == \
self._beamline_setup.diffractometer_hwobj.PLATE:
state = False
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
self.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'osc_start', self.acq_widget.osc_start_ledit, float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update(
'osc_range', self.acq_widget.osc_range_ledit, float,
self.osc_range_validator)
if self.acq_widget.findChild(QtGui.QLineEdit, "kappa_ledit"):
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'kappa', self.acq_widget.kappa_ledit, float,
self.kappa_validator)
if self.acq_widget.findChild(QtGui.QLineEdit, "kappa_phi_ledit"):
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update(
'kappa_phi', self.acq_widget.kappa_phi_ledit, float,
self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_valdidator.setRange(lower, upper, 5)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget.exp_time_ledit,
float, self.exp_time_validator)
if 'number_of_images' in limits_dict:
limits = tuple(map(int,
limits_dict['number_of_images'].split(',')))
(lower, upper) = limits
self.num_img_valdidator.setRange(lower, upper)
self.first_img_valdidator.setRange(lower, upper)
self._acquisition_mib.bind_value_update(
'first_image', self.acq_widget.first_image_ledit, int,
self.first_img_validator)
self._acquisition_mib.bind_value_update(
'num_images', self.acq_widget.num_images_ledit, int,
self.num_img_validator)
num_passes = self.acq_widget.findChild(QtGui.QLineEdit,
"num_passes_ledit")
if num_passes:
self._acquisition_mib.\
bind_value_update('num_passes', num_passes, int,
QtGui.QIntValidator(1, 1000, self))
overlap_ledit = self.acq_widget.findChild(QtGui.QLineEdit,
"overlap_ledit")
if overlap_ledit:
self._acquisition_mib.\
bind_value_update('overlap', overlap_ledit, float,
QtGui.QDoubleValidator(-1000, 1000, 2, self))
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget.energy_ledit,
float,
self.energy_validator)
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget.transmission_ledit,
float,
self.transmission_validator)
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget.resolution_ledit,
float,
self.resolution_validator)
self._acquisition_mib.\
bind_value_update('inverse_beam',
self.acq_widget.inverse_beam_cbx,
bool,
None)
self._acquisition_mib.\
bind_value_update('shutterless',
self.acq_widget.shutterless_cbx,
bool,
None)
"""self.acq_widget_layout.osc_start_ledit.setToolTip(\
"Oscillation start limits %0.2f : %0.2f" %(\
self.osc_start_validator.bottom(),
self.osc_start_validator.top()))
self.acq_widget_layout.osc_range_ledit.setToolTip(\
"Oscillation range limits %0.2f : %0.2f" %(\
self.osc_ra_validator.bottom(),
self.osc_start_validator.top()))"""
self.set_tunable_energy(beamline_setup.tunable_wavelength())
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless(
)
self.acq_widget.shutterless_cbx.setEnabled(has_shutter_less)
self.acq_widget.shutterless_cbx.setChecked(has_shutter_less)
if self._beamline_setup_hwobj.disable_num_passes():
num_passes = self.acq_widget.findChild(QtGui.QLineEdit,
"num_passes_ledit")
if num_passes:
num_passes.setDisabled(True)
def first_image_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._path_template.start_num = int(new_value)
widget = self.acq_widget.first_image_ledit
self.emit(QtCore.SIGNAL('pathTemplateChanged'), widget, new_value)
def num_images_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
self._path_template.num_files = int(new_value)
widget = self.acq_widget.num_images_ledit
self.emit(QtCore.SIGNAL('pathTemplateChanged'), widget, new_value)
def overlap_changed(self, new_value):
"""
Descript. :
"""
if self._beamline_setup_hwobj:
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless(
)
else:
has_shutter_less = True
if has_shutter_less:
try:
new_value = float(new_value)
except ValueError:
pass
if new_value != 0:
self.acq_widget.shutterless_cbx.setEnabled(False)
self.acq_widget.shutterless_cbx.setChecked(False)
self._acquisition_parameters.shutterless = False
else:
self.acq_widget.shutterless_cbx.setEnabled(True)
self.acq_widget.shutterless_cbx.setChecked(True)
self._acquisition_parameters.shutterless = True
def use_mad(self, state):
"""
Descript. :
"""
self.acq_widget.energies_combo.setEnabled(state)
if state:
(name, energy) = self.get_mad_energy()
if energy != 0:
self.set_energy(energy, 0)
self.emit(QtCore.SIGNAL('mad_energy_selected'), name, energy,
state)
else:
self.set_energy(self.previous_energy, 0)
energy = self._beamline_setup_hwobj.energy_hwobj.getCurrentEnergy()
self.emit(QtCore.SIGNAL('mad_energy_selected'), '',
self.previous_energy, state)
def set_use_inverse_beam(self, state):
"""
Descript. :
"""
if state:
self.acq_widget.subwedge_size_ledit.setEnabled(True)
else:
self.acq_widget.subwedge_size_ledit.setDisabled(True)
def use_inverse_beam(self):
"""
Descript. :
"""
return self.acq_widget.inverse_beam_cbx.checkState == QtCore.Qt.Checked
def get_num_subwedges(self):
"""
Descript. :
"""
return int(self.acq_widget.subwedge_size_ledit.text())
def subwedge_size_ledit_change(self, new_value):
"""
Descript. :
"""
if int(new_value) > self._acquisition_parameters.num_images:
Qt4_widget_colors.set_widget_color(\
self.acq_widget.subwedge_size_ledit,
Qt4_widget_colors.LIGHT_RED)
else:
Qt4_widget_colors.set_widget_color(
self.acq_widget.subwedge_size_ledit, Qt4_widget_colors.WHITE)
def get_mad_energy(self):
"""
Descript. :
"""
energy_str = str(self.acq_widget.energies_combo.currentText())
(name, value) = energy_str.split(':')
name = name.strip()
value = value.strip()
value = 0 if (value == '-') else value
return (name, value)
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
self.acq_widget.energies_combo.clear()
inflection = ('ip: %.4f' % energy_scan_result.inflection) if \
energy_scan_result.inflection else 'ip: -'
peak = ('pk: %.4f' % energy_scan_result.peak) if \
energy_scan_result.peak else 'pk: -'
first_remote = ('rm1: %.4f' % energy_scan_result.first_remote) if \
energy_scan_result.first_remote else 'rm1: -'
second_remote = ('rm2: %.4f' % energy_scan_result.second_remote) if \
energy_scan_result.second_remote else 'rm2: -'
self.acq_widget.energies_combo.\
addItems([inflection, peak, first_remote, second_remote])
def energy_selected(self, index):
"""
Descript. :
"""
if self.acq_widget.mad_cbox.isChecked():
(name, energy) = self.get_mad_energy()
if energy != 0:
self.set_energy(energy, 0)
self.emit(QtCore.SIGNAL('mad_energy_selected'), name, energy, True)
def set_energy(self, energy, wav):
"""
Descript. :
"""
self.acq_widget.energy_ledit.setText("%.4f" % float(energy))
def update_transmission(self, transmission):
"""
Descript. :
"""
self.acq_widget.transmission_ledit.setText("%.2f" %
float(transmission))
def update_resolution(self, resolution):
"""
Descript. :
"""
self.acq_widget.resolution_ledit.setText("%.3f" % float(resolution))
def update_energy_limits(self, limits):
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(\
"Transmission limits %0.3f : %0.3f" %(limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.3f : %0.3f" % (limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
if limits:
self.exp_time_validator.setRange(limits[0], limits[1], 4)
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.3f : %0.3f" % (limits[0], limits[1]))
self._acquisition_mib.validate_all()
def update_osc_range_limits(self, exp_time):
osc_range = 40.0 * exp_time
self.osc_range_validator.setRange(0, osc_range, 4)
self.acq_widget_layout.osc_range_ledit.setToolTip(
"Oscillation range limits %0.2f : %0.2f" % (0, osc_range))
self._acquisition_mib.validate_all()
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._path_template = path_template
self._acquisition_mib.set_model(acquisition_parameters)
#Update mad widgets
mad = True if self._path_template.mad_prefix != '' else False
if mad:
mad_prefix = self._path_template.mad_prefix
index = MAD_ENERGY_COMBO_NAMES[mad_prefix]
self.acq_widget.energies_combo.setCurrentIndex(index)
self.acq_widget.mad_cbox.setChecked(True)
self.acq_widget.energies_combo.setEnabled(True)
else:
self.acq_widget.mad_cbox.setChecked(False)
self.acq_widget.energies_combo.setEnabled(False)
self.acq_widget.energies_combo.setCurrentIndex(0)
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget.energy_ledit.setEnabled(state)
self.acq_widget.mad_cbox.setEnabled(state)
self.acq_widget.energies_combo.setEnabled(state)
def disable_inverse_beam(self, state):
"""
Descript. :
"""
if state:
self.acq_widget.inverse_beam_cbx.hide()
self.acq_widget.subwedge_size_label.hide()
self.acq_widget.subwedge_size_ledit.hide()
else:
self.acq_widget.inverse_beam_cbx.show()
self.acq_widget.subwedge_size_label.show()
self.acq_widget.subwedge_size_ledit.show()
def hide_aperture(self, state):
"""
Descript. :
"""
pass
class AcquisitionWidget(QWidget):
acqParametersChangedSignal = pyqtSignal(list)
madEnergySelectedSignal = pyqtSignal(str, float, bool)
def __init__(self, parent=None, name=None, fl=0, acq_params=None,
path_template=None, layout='horizontal'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# If the acq. widget is used with grids then total osc range is not
# equal to num_images * osc_range, but num_images_per_line * osc_range
# For grids the osc total range is updated when a grid is selected
self.grid_mode = False
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.use_osc_start(False)
else:
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.fix_osc_start)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.osc_start_ledit.textEdited.connect(\
self.osc_start_ledit_changed)
self.acq_widget_layout.osc_range_ledit.textEdited.connect(\
self.osc_range_per_frame_ledit_changed)
self.acq_widget_layout.osc_total_range_ledit.textEdited.connect(\
self.osc_total_range_ledit_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
self.acq_widget_layout.kappa_ledit.textEdited.connect(\
self.kappa_ledit_changed)
self.acq_widget_layout.kappa_phi_ledit.textEdited.connect(\
self.kappa_phi_ledit_changed)
if self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit"):
self.acq_widget_layout.overlap_ledit.textChanged.connect(\
self.overlap_changed)
if self.acq_widget_layout.findChild(QCheckBox, "max_osc_range_cbx"):
self.acq_widget_layout.max_osc_range_cbx.toggled.connect(\
self.max_osc_range_toggled)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(\
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_per_frame_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.osc_total_range_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_total_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.first_img_validator = QIntValidator(\
0, 99999, self.acq_widget_layout.first_image_ledit)
self.num_img_validator = QIntValidator(\
1, 9999999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def use_max_osc_range(self, state):
self.acq_widget_layout.max_osc_range_cbx.setEnabled(state)
def fix_osc_start(self, state):
"""
Fix osc start, so the lineEdit do not change when osc is changed
"""
self.acq_widget_layout.osc_start_ledit.setEnabled(state)
def update_osc_start(self, new_value):
"""
Updates osc line edit
"""
if "osc_start" not in self.value_changed_list and \
not self.acq_widget_layout.osc_start_ledit.hasFocus() and \
not self.acq_widget_layout.osc_start_cbox.isChecked():
osc_start_value = 0
try:
osc_start_value = round(float(new_value), 2)
except TypeError:
pass
self.acq_widget_layout.osc_start_ledit.setText(str(osc_start_value))
self._acquisition_parameters.osc_start = osc_start_value
#self.update_osc_total_range_limits()
#self.update_num_images_limits()
def osc_start_ledit_changed(self, osc_start):
"""Fixes osc start edit"""
if "osc_start" not in self.value_changed_list:
self.value_changed_list.append("osc_start")
self.update_osc_total_range_limits()
self.update_num_images_limits()
self.emit_acq_parameters_changed()
def update_osc_start_limits(self):
"""In the plate mode sets osc start limits"""
self.update_osc_total_range_limits()
self.update_num_images_limits()
def osc_range_per_frame_ledit_changed(self, new_value):
self.update_osc_total_range()
self.update_num_images_limits()
self.update_exp_time_limits()
self.emit_acq_parameters_changed()
def update_osc_range_per_frame_limits(self):
try:
max_osc_speed = self._diffractometer_hwobj.get_osc_max_speed()
top_limit = max_osc_speed * float(self.acq_widget_layout.exp_time_ledit.text())
self.osc_range_per_frame_validator.setTop(top_limit)
tool_tip = "Oscillation range per frame limits 0 : " +\
"%0.4f\n4 digits precision." % top_limit
self.acq_widget_layout.osc_range_ledit.setToolTip(tool_tip)
self._acquisition_mib.validate_all()
except:
pass
def update_osc_total_range(self):
self.acq_widget_layout.osc_total_range_ledit.blockSignals(True)
if not self.grid_mode:
try:
self.acq_widget_layout.osc_total_range_ledit.setText(str(\
float(self.acq_widget_layout.osc_range_ledit.text()) * \
float(self.acq_widget_layout.num_images_ledit.text())))
except:
pass
self.acq_widget_layout.osc_total_range_ledit.blockSignals(False)
def update_total_exp_time(self):
try:
self.acq_widget_layout.total_exp_time_ledit.setText("%.2f" % \
(float(self.acq_widget_layout.exp_time_ledit.text()) * \
float(self.acq_widget_layout.num_images_ledit.text())))
except:
pass
def osc_total_range_ledit_changed(self, new_value):
if not self.grid_mode:
try:
num_images = int(float(new_value) / \
float(self.acq_widget_layout.osc_range_ledit.text()))
self.acq_widget_layout.num_images_ledit.blockSignals(True)
self.acq_widget_layout.num_images_ledit.setText("%d" % num_images)
self._acquisition_parameters.num_images = num_images
self.acq_widget_layout.num_images_ledit.blockSignals(False)
except:
pass
self.emit_acq_parameters_changed()
def update_osc_total_range_limits(self, num_images=None):
"""Updates osc totol range. Limits are changed if a plate is used.
- For simple oscillation osc_range is defined by osc_start and
osc_start top limit.
- For mesh osc_range is defined by number of images per line
and osc in the middle of mesh
"""
if self._diffractometer_hwobj.in_plate_mode():
if hasattr(self.parent(), "set_osc_total_range"):
self.parent().set_osc_total_range(num_images)
self._acquisition_mib.validate_all()
def update_exp_time_limits(self):
try:
exp_time_limits = self._beamline_setup_hwobj.detector_hwobj.get_exposure_time_limits()
max_osc_speed = self._diffractometer_hwobj.get_osc_max_speed()
top_limit = float(self.acq_widget_layout.osc_range_ledit.text()) / max_osc_speed
limits = (max(exp_time_limits[0], top_limit), exp_time_limits[1])
self.update_detector_exp_time_limits(limits)
except:
pass
def update_kappa(self, new_value):
"""
Updates kappa value
"""
if not self.acq_widget_layout.kappa_ledit.hasFocus() and \
new_value is not None:
self.acq_widget_layout.kappa_ledit.setText(str(new_value))
self.emit_acq_parameters_changed()
def update_kappa_phi(self, new_value):
"""
Descript. :
"""
if not self.acq_widget_layout.kappa_phi_ledit.hasFocus() and \
new_value:
self.acq_widget_layout.kappa_phi_ledit.setText(str(new_value))
self.emit_acq_parameters_changed()
def use_osc_start(self, state):
"""
Descript. :
"""
self.acq_widget_layout.osc_start_cbox.setVisible(state)
self.acq_widget_layout.osc_start_label.setVisible(not state)
self.acq_widget_layout.osc_start_ledit.setEnabled(not state)
def use_kappa(self, state):
"""
Descript. :
"""
if self._diffractometer_hwobj is not None:
if self._diffractometer_hwobj.in_plate_mode():
state = False
self.acq_widget_layout.kappa_label.setEnabled(state)
self.acq_widget_layout.kappa_ledit.setEnabled(state)
self.acq_widget_layout.kappa_phi_label.setEnabled(state)
self.acq_widget_layout.kappa_phi_ledit.setEnabled(state)
def set_beamline_setup(self, beamline_setup):
"""
Descript. :
"""
self._beamline_setup_hwobj = beamline_setup
limits_dict = self._beamline_setup_hwobj.get_acquisition_limit_values()
self._diffractometer_hwobj = self._beamline_setup_hwobj.diffractometer_hwobj
if 'osc_range' in limits_dict:
limits = tuple(map(float, limits_dict['osc_range'].split(',')))
(lower, upper) = limits
self.osc_start_validator.setRange(lower, upper, 4)
self.osc_range_per_frame_validator.setRange(lower, upper, 4)
self.osc_total_range_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('osc_start',
self.acq_widget_layout.osc_start_ledit,
float,
self.osc_start_validator)
self._acquisition_mib.bind_value_update('osc_range',
self.acq_widget_layout.osc_range_ledit,
float,
self.osc_range_per_frame_validator)
self._acquisition_mib.bind_value_update('osc_total_range',
self.acq_widget_layout.osc_total_range_ledit,
float,
self.osc_total_range_validator)
if 'kappa' in limits_dict:
limits = tuple(map(float, limits_dict['kappa'].split(',')))
(lower, upper) = limits
self.kappa_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa',
self.acq_widget_layout.kappa_ledit,
float,
self.kappa_validator)
if 'kappa_phi' in limits_dict:
limits = tuple(map(float, limits_dict['kappa_phi'].split(',')))
(lower, upper) = limits
self.kappa_phi_validator.setRange(lower, upper, 4)
self._acquisition_mib.bind_value_update('kappa_phi',
self.acq_widget_layout.kappa_phi_ledit,
float,
self.kappa_phi_validator)
if 'exposure_time' in limits_dict:
limits = tuple(map(float, limits_dict['exposure_time'].split(',')))
(lower, upper) = limits
self.exp_time_validator.setRange(lower, upper, 6)
self._acquisition_mib.bind_value_update('exp_time',
self.acq_widget_layout.exp_time_ledit,
float,
self.exp_time_validator)
if 'number_of_images' in limits_dict:
limits = tuple(map(float, limits_dict['number_of_images'].split(',')))
(lower, upper) = limits
self.num_img_validator.setRange(lower, upper)
self.first_img_validator.setRange(lower, upper)
self._acquisition_mib.bind_value_update('first_image',
self.acq_widget_layout.first_image_ledit,
int,
self.first_img_validator)
self._acquisition_mib.bind_value_update('num_images',
self.acq_widget_layout.num_images_ledit,
int,
self.num_img_validator)
num_passes = self.acq_widget_layout.findChild(QLineEdit, "num_passes_ledit")
if num_passes:
self._acquisition_mib.\
bind_value_update('num_passes', num_passes, int,
QIntValidator(1, 1000, self))
overlap_ledit = self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit")
if overlap_ledit:
self._acquisition_mib.\
bind_value_update('overlap', overlap_ledit, float,
QDoubleValidator(-1000, 1000, 2, self))
self._acquisition_mib.\
bind_value_update('energy',
self.acq_widget_layout.energy_ledit,
float,
self.energy_validator)
self.update_energy_limits((self.energy_validator.bottom(),
self.energy_validator.top()))
self._acquisition_mib.\
bind_value_update('transmission',
self.acq_widget_layout.transmission_ledit,
float,
self.transmission_validator)
self.update_transmission_limits((self.transmission_validator.bottom(),
self.transmission_validator.top()))
self._acquisition_mib.\
bind_value_update('resolution',
self.acq_widget_layout.resolution_ledit,
float,
self.resolution_validator)
#self.update_resolution_limits((self.resolution_validator.bottom(),
# self.resolution_validator.top()))
self._acquisition_mib.\
bind_value_update('shutterless',
self.acq_widget_layout.shutterless_cbx,
bool,
None)
self.set_tunable_energy(beamline_setup.tunable_wavelength())
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless()
self.acq_widget_layout.shutterless_cbx.setEnabled(has_shutter_less)
self.acq_widget_layout.shutterless_cbx.setChecked(has_shutter_less)
if self._beamline_setup_hwobj.disable_num_passes():
num_passes = self.acq_widget_layout.findChild(QLineEdit, "num_passes_ledit")
if num_passes:
num_passes.setDisabled(True)
self.init_detector_roi_modes()
def first_image_ledit_change(self, new_value):
"""
Descript. :
"""
#if str(new_value).isdigit():
# #self._path_template.start_num = int(new_value)
# #widget = self.acq_widget_layout.first_image_ledit
self.emit_acq_parameters_changed()
def exposure_time_ledit_changed(self, new_values):
"""If the exposure time changes we have to check the osc speed
and if necessary update osc range per frame
"""
self.update_osc_range_per_frame_limits()
self.update_osc_total_range_limits()
self.update_total_exp_time()
self.emit_acq_parameters_changed()
def num_images_ledit_change(self, new_value):
"""
Descript. :
"""
if str(new_value).isdigit():
#self._path_template.num_files = int(new_value)
self.update_osc_range_per_frame_limits()
self.update_osc_total_range_limits()
self.update_osc_total_range()
self.update_total_exp_time()
self.emit_acq_parameters_changed()
def overlap_changed(self, new_value):
"""
Descript. :
"""
if self._beamline_setup_hwobj:
has_shutter_less = self._beamline_setup_hwobj.detector_has_shutterless()
else:
has_shutter_less = True
if has_shutter_less:
try:
new_value = float(new_value)
except ValueError:
pass
if new_value != 0:
self.acq_widget_layout.shutterless_cbx.setEnabled(False)
self.acq_widget_layout.shutterless_cbx.setChecked(False)
self._acquisition_parameters.shutterless = False
else:
self.acq_widget_layout.shutterless_cbx.setEnabled(True)
self.acq_widget_layout.shutterless_cbx.setChecked(True)
self._acquisition_parameters.shutterless = True
def use_mad(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.setEnabled(state)
if state:
(name, energy) = self.get_mad_energy()
if energy != 0:
self.update_energy(energy)
self.madEnergySelectedSignal.emit(name, energy, state)
else:
self.update_energy(self.previous_energy)
energy = self._beamline_setup_hwobj.energy_hwobj.getCurrentEnergy()
self.madEnergySelectedSignal.emit('', self.previous_energy, state)
def max_osc_range_toggled(self, state):
self.update_osc_total_range_limits()
def get_mad_energy(self):
"""
Descript. :
"""
energy_str = str(self.acq_widget_layout.energies_combo.currentText())
(name, value) = energy_str.split(':')
name = name.strip()
value = value.strip()
value = 0 if (value == '-') else float(value)
return (name, value)
def set_energies(self, energy_scan_result):
"""
Descript. :
"""
self.acq_widget_layout.energies_combo.clear()
inflection = ('ip: %.4f' % energy_scan_result.inflection) if \
energy_scan_result.inflection else 'ip: -'
peak = ('pk: %.4f' % energy_scan_result.peak) if \
energy_scan_result.peak else 'pk: -'
first_remote = ('rm1: %.4f' % energy_scan_result.first_remote) if \
energy_scan_result.first_remote else 'rm1: -'
second_remote = ('rm2: %.4f' % energy_scan_result.second_remote) if \
energy_scan_result.second_remote else 'rm2: -'
self.acq_widget_layout.energies_combo.\
addItems([inflection, peak, first_remote, second_remote])
def energy_selected(self, index):
"""
Descript. :
"""
if self.acq_widget_layout.mad_cbox.isChecked():
(name, energy) = self.get_mad_energy()
if energy != 0:
self.update_energy(energy)
self.madEnergySelectedSignal.emit(name, energy, True)
def energy_ledit_changed(self, new_value):
if "energy" not in self.value_changed_list:
self.value_changed_list.append("energy")
self.emit_acq_parameters_changed()
def update_energy(self, energy, wav=None):
"""
Descript. :
"""
if "energy" not in self.value_changed_list and \
not self.acq_widget_layout.energy_ledit.hasFocus():
self.acq_widget_layout.energy_ledit.setText(str(energy))
self.emit_acq_parameters_changed()
def transmission_ledit_changed(self, transmission):
if "transmission" not in self.value_changed_list:
self.value_changed_list.append("transmission")
self.emit_acq_parameters_changed()
def update_transmission(self, transmission):
if "transmission" not in self.value_changed_list:
self.acq_widget_layout.transmission_ledit.setText(str(transmission))
self.emit_acq_parameters_changed()
def resolution_ledit_changed(self, resolution):
if "resolution" not in self.value_changed_list:
self.value_changed_list.append("resolution")
self.emit_acq_parameters_changed()
def update_resolution(self, resolution):
if "resolution" not in self.value_changed_list and \
not self.acq_widget_layout.resolution_ledit.hasFocus():
self.acq_widget_layout.resolution_ledit.setText(str(resolution))
self.emit_acq_parameters_changed()
def update_energy_limits(self, limits):
if limits:
self.energy_validator.setBottom(limits[0])
self.energy_validator.setTop(limits[1])
self.acq_widget_layout.energy_ledit.setToolTip(\
"Energy limits %0.4f : %0.4f keV\n" % \
(limits[0], limits[1]) + \
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_transmission_limits(self, limits):
if limits:
self.transmission_validator.setBottom(limits[0])
self.transmission_validator.setTop(limits[1])
self.acq_widget_layout.transmission_ledit.setToolTip(\
"Transmission limits %0.2f : %0.2f %%\n" % \
(limits[0], limits[1]) + \
"2 digits precision.")
self._acquisition_mib.validate_all()
def update_resolution_limits(self, limits):
if limits:
self.resolution_validator.setBottom(limits[0])
self.resolution_validator.setTop(limits[1])
self.acq_widget_layout.resolution_ledit.setToolTip(
"Resolution limits %0.4f : %0.4f %s\n" % \
(limits[0], limits[1], chr(197)) +
"4 digits precision.")
self._acquisition_mib.validate_all()
def update_detector_exp_time_limits(self, limits):
if limits:
self.exp_time_validator.setRange(limits[0], limits[1], 6)
self.acq_widget_layout.exp_time_ledit.setToolTip(
"Exposure time limits %0.6f s : %0.1f s\n" % \
(limits[0], limits[1]) + \
"6 digits precision.")
self._acquisition_mib.validate_all()
def update_num_images_limits(self, num_images_limits=None):
"""Updates number of images limit. Method used if plate mode.
"""
self._acquisition_mib.validate_all()
return
if self._diffractometer_hwobj.in_plate_mode():
if num_images_limits is None:
try:
osc_start = float(self.acq_widget_layout.osc_start_ledit.text())
osc_range = float(self.acq_widget_layout.osc_range_ledit.text())
except ValueError:
return
if osc_range == 0:
return
num_images_limits = int((self.osc_start_validator.top() - \
osc_start) / osc_range)
self.num_img_validator.setTop(num_images_limits)
self.acq_widget_layout.num_images_ledit.setToolTip(\
"Number of images limits : %d" % num_images_limits)
self._acquisition_mib.validate_all()
def init_detector_roi_modes(self):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
roi_modes = self._beamline_setup_hwobj.detector_hwobj.get_roi_modes()
if (len(roi_modes) > 0 and
self.acq_widget_layout.detector_roi_mode_combo.count() == 0):
for roi_mode in roi_modes:
self.acq_widget_layout.detector_roi_mode_combo.\
addItem(roi_mode)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(True)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(True)
#self._acquisition_mib.bind_value_update('detector_roi_mode',
# self.acq_widget_layout.detector_roi_mode_combo,
## str,
# None)
def update_detector_roi_mode(self, roi_mode_index):
"""
Descript. :
"""
if roi_mode_index is not None and \
self.acq_widget_layout.detector_roi_mode_combo.count() > 0:
self.acq_widget_layout.detector_roi_mode_combo.\
setCurrentIndex(roi_mode_index)
def detector_roi_mode_changed(self, roi_mode_index):
"""
Descript. :
"""
if self._beamline_setup_hwobj is not None:
self._beamline_setup_hwobj.detector_hwobj.set_roi_mode(roi_mode_index)
def kappa_ledit_changed(self, new_value):
if "kappa" not in self.value_changed_list:
self.value_changed_list.append("kappa")
self.emit_acq_parameters_changed()
def kappa_phi_ledit_changed(self, new_value):
if "kappa_phi" not in self.value_changed_list:
self.value_changed_list.append("kappa_phi")
self.emit_acq_parameters_changed()
def update_data_model(self, acquisition_parameters, path_template):
"""
Descript. :
"""
self._acquisition_parameters = acquisition_parameters
self._path_template = path_template
self._acquisition_mib.set_model(acquisition_parameters)
#Update mad widgets
mad = True if self._path_template.mad_prefix != '' else False
if mad:
mad_prefix = str(self._path_template.mad_prefix)
index = MAD_ENERGY_COMBO_NAMES[str(mad_prefix)]
self.acq_widget_layout.energies_combo.setCurrentIndex(index)
self.acq_widget_layout.mad_cbox.setChecked(True)
self.acq_widget_layout.energies_combo.setEnabled(True)
else:
self.acq_widget_layout.mad_cbox.setChecked(False)
self.acq_widget_layout.energies_combo.setEnabled(False)
self.acq_widget_layout.energies_combo.setCurrentIndex(0)
#self.update_osc_start_limits()
#self.update_osc_total_range()
self.emit_acq_parameters_changed()
def set_tunable_energy(self, state):
"""
Descript. :
"""
self.acq_widget_layout.energy_ledit.setEnabled(state)
self.acq_widget_layout.mad_cbox.setEnabled(state)
self.acq_widget_layout.energies_combo.setEnabled(state)
def check_parameter_conflict(self):
return self._acquisition_mib.validate_all()
def emit_acq_parameters_changed(self):
self.acqParametersChangedSignal.emit(self._acquisition_mib.validate_all())
class CreateCharWidget(CreateTaskBase):
"""
Descript. :
"""
def __init__(self,parent = None,name = None, fl = 0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_widget = DataPathWidget(self,
data_model = self._path_template, layout = 'vertical')
self._vertical_dimension_widget = loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(2, 2, 2, 2)
_main_vlayout.setSpacing(6)
_main_vlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.\
connect(self.path_template_changed)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(\
self.characterisation_gbox_toggled)
self._char_widget.wait_result_cbx.toggled.connect(\
self.wait_results_cbx_toggled)
self._char_widget.execute_plan_cbx.toggled.connect(\
self.run_diffraction_plan_cbx_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx,
bool, None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox,
int, None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
queue_model_enumerables.XTAL_SPACEGROUPS
)
self._data_path_widget.data_path_layout.compression_cbox.setVisible(False)
def enable_compression(self, state):
CreateTaskBase.enable_compression(self, False)
def use_induced_burn(self, state):
"""
Descript. :
"""
self._acquisition_parameters.induce_burn = state
def _space_group_change(self, index):
"""
Descript. :
"""
self._char_params.space_group = (
queue_model_enumerables.XTAL_SPACEGROUPS[index]
)
def _set_space_group(self, space_group):
"""
Descript. :
"""
index = 0
if self._vertical_dimension_widget:
if space_group in queue_model_enumerables.XTAL_SPACEGROUPS:
index = queue_model_enumerables.XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self._vertical_dimension_widget.space_group_ledit.\
setCurrentIndex(index)
def init_models(self):
"""
Descript. :
"""
CreateTaskBase.init_models(self)
self._init_models()
def _init_models(self):
"""
Descript. :
"""
self._char = queue_model_objects.Characterisation()
self._char_params = self._char.characterisation_parameters
self._processing_parameters = queue_model_objects.ProcessingParameters()
self._set_space_group(self._processing_parameters.space_group)
if self._beamline_setup_hwobj is not None:
self._acquisition_parameters = self._beamline_setup_hwobj.\
get_default_char_acq_parameters()
self._char_params = self._beamline_setup_hwobj.\
get_default_characterisation_parameters()
else:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
self._path_template.reference_image_prefix = 'ref'
# The num images drop down default value is 1
# we would like it to be 2
self._acquisition_parameters.num_images = 2
self._char.characterisation_software =\
queue_model_enumerables.COLLECTION_ORIGIN.EDNA
self._path_template.num_files = 2
self._path_template.compression = False
self._acquisition_parameters.shutterless = False
def single_item_selection(self, tree_item):
"""
Descript. :
"""
CreateTaskBase.single_item_selection(self, tree_item)
if isinstance(tree_item, Qt4_queue_item.SampleQueueItem):
#self._init_models()
if self._char_params.space_group == "":
sample_model = tree_item.get_model()
self._set_space_group(sample_model.processing_parameters.space_group)
#self._acq_widget.update_data_model(self._acquisition_parameters,
# self._path_template)
#self._char_params_mib.set_model(self._char_params)
elif isinstance(tree_item, Qt4_queue_item.BasketQueueItem):
self.setDisabled(False)
elif isinstance(tree_item, Qt4_queue_item.CharacterisationQueueItem):
if tree_item.get_model().is_executed():
self.setDisabled(True)
else:
self.setDisabled(False)
self._char = tree_item.get_model()
if self._char.get_path_template():
self._path_template = self._char.get_path_template()
self._data_path_widget.update_data_model(self._path_template)
data_collection = self._char.reference_image_collection
self._char_params = self._char.characterisation_parameters
self._char_params_mib.set_model(self._char_params)
self._acquisition_parameters = data_collection.acquisitions[0].\
acquisition_parameters
self._acq_widget.update_data_model(self._acquisition_parameters,
self._path_template)
#self.get_acquisition_widget().use_osc_start(True)
if len(data_collection.acquisitions) == 1:
self.select_shape_with_cpos(self._acquisition_parameters.\
centred_position)
self._processing_parameters = data_collection.processing_parameters
else:
self.setDisabled(True)
def update_processing_parameters(self, crystal):
"""
Descript. :
"""
self._processing_parameters.space_group = crystal.space_group
self._char_params.space_group = crystal.space_group
self._processing_parameters.cell_a = crystal.cell_a
self._processing_parameters.cell_alpha = crystal.cell_alpha
self._processing_parameters.cell_b = crystal.cell_b
self._processing_parameters.cell_beta = crystal.cell_beta
self._processing_parameters.cell_c = crystal.cell_c
self._processing_parameters.cell_gamma = crystal.cell_gamma
def approve_creation(self):
"""
Descript. :
"""
result = CreateTaskBase.approve_creation(self)
selected_shapes = self._graphics_manager_hwobj.get_selected_shapes()
for shape in selected_shapes:
if isinstance(shape, GraphicsItemPoint):
result = True
return result
# Called by the owning widget (task_toolbox_widget) to create
# a collection. when a data collection group is selected.
def _create_task(self, sample, shape):
"""
Descript. :
"""
tasks = []
if not shape or not isinstance(shape, GraphicsItemPoint):
cpos = queue_model_objects.CentredPosition()
cpos.snapshot_image = self._graphics_manager_hwobj.get_scene_snapshot()
else:
# Shapes selected and sample is mounted, get the
# centred positions for the shapes
snapshot = self._graphics_manager_hwobj.\
get_scene_snapshot(shape)
cpos = copy.deepcopy(shape.get_centred_position())
cpos.snapshot_image = snapshot
char_params = copy.deepcopy(self._char_params)
acq = self._create_acq(sample)
dc = queue_model_objects.\
DataCollection([acq], sample.crystals[0],
self._processing_parameters)
# Reference images for characterisations should be taken 90 deg apart
# this is achived by setting overap to -89
acq.acquisition_parameters.overlap = -89
acq.acquisition_parameters.centred_position = cpos
dc.acquisitions[0] = acq
dc.experiment_type = queue_model_enumerables.EXPERIMENT_TYPE.EDNA_REF
dc.run_processing_parallel = False
char = queue_model_objects.Characterisation(dc,
char_params)
char.set_name(dc.acquisitions[0].\
path_template.get_prefix())
char.set_number(dc.acquisitions[0].\
path_template.run_number)
char.run_characterisation = self._char_widget.characterisation_gbox.isChecked()
char.wait_result = self._char_widget.wait_result_cbx.isChecked()
char.run_diffraction_plan = self._char_widget.execute_plan_cbx.isChecked()
char.diff_plan_compression = self._tree_brick.compression_state
tasks.append(char)
self._path_template.run_number += 1
return tasks
def characterisation_gbox_toggled(self, state):
if self._char:
self._char.run_characterisation = state
def wait_results_cbx_toggled(self, state):
if self._char:
self._char.wait_result = state
def run_diffraction_plan_cbx_toggled(self, state):
if self._char:
self._char.run_diffraction_plan = state
def __init__(self, *args):
"""
Descript. :
"""
BlissWidget.__init__(self, *args)
# Internal variables ------------------------------------------------
self.sample = queue_model_objects.Sample()
self.crystal = self.sample.crystals[0]
self.sample_mib = DataModelInputBinder(self.sample)
self.crystal_mib = DataModelInputBinder(self.crystal)
# Signals ------------------------------------------------------------
# Slots --------------------------------------------------------------
self.defineSlot("populate_sample_details", ({}))
# Graphic elements ----------------------------------------------------
_info_widget = QtGui.QWidget(self)
self.crystal_widget = uic.loadUi(os.path.join(
os.path.dirname(__file__),
"widgets/ui_files/Qt4_crystal_widget_layout.ui"))
self.sample_info_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
"widgets/ui_files/Qt4_sample_info_widget_layout.ui"))
# Layout --------------------------------------------------------------
_info_widget_hlayout = QtGui.QHBoxLayout(_info_widget)
_info_widget_hlayout.addWidget(self.sample_info_widget)
_info_widget_hlayout.addWidget(self.crystal_widget)
_info_widget_hlayout.addStretch(0)
_main_hlayout = QtGui.QVBoxLayout(self)
_main_hlayout.addWidget(_info_widget)
_main_hlayout.addStretch(0)
_main_hlayout.setSpacing(0)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self.crystal_mib.bind_value_update('space_group',
self.crystal_widget.space_group_value_label,
str,
None)
self.crystal_mib.bind_value_update('protein_acronym',
self.crystal_widget.protein_acronym_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_a',
self.crystal_widget.a_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_alpha',
self.crystal_widget.alpha_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_b',
self.crystal_widget.b_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_beta',
self.crystal_widget.beta_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_c',
self.crystal_widget.c_value_label,
str,
None)
self.crystal_mib.bind_value_update('cell_gamma',
self.crystal_widget.gamma_value_label,
str,
None)
self.sample_mib.bind_value_update('name',
self.sample_info_widget.name_value_label,
str,
None)
self.sample_mib.bind_value_update('code',
self.sample_info_widget.data_matrix_value_label,
str,
None)
self.sample_mib.bind_value_update('holder_length',
self.sample_info_widget.holder_length_value_label,
str,
None)
self.sample_mib.bind_value_update('lims_sample_location',
self.sample_info_widget.sample_location_value_label,
str,
None)
self.sample_mib.bind_value_update('lims_container_location',
self.sample_info_widget.basket_location_value_label,
str,
None)
class XrayImagingParametersWidget(QWidget):
def __init__(self, parent=None, name=None, fl=0, xray_imaging_params=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if xray_imaging_params is None:
self._xray_imaging_parameters = \
queue_model_objects.XrayImagingParameters()
else:
self._xray_imaging_parameters = xray_imaging_params
self._xray_imaging_mib = DataModelInputBinder(
self._xray_imaging_parameters)
self._parameters_widget = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_xray_imaging_parameters_widget_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self._parameters_widget)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
def set_beamline_setup(self, beamline_setup):
"""Sets beamline setup and links qt gui with data model
"""
self._beamline_setup_hwobj = beamline_setup
self._xray_imaging_mib.\
bind_value_update('camera_hw_binning',
self._parameters_widget.camera_hw_binning_combo,
int,
None)
self._xray_imaging_mib.\
bind_value_update('camera_hw_roi',
self._parameters_widget.camera_hw_roi_combo,
int,
None)
self._xray_imaging_mib.\
bind_value_update('store_data',
self._parameters_widget.store_data_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('live_display',
self._parameters_widget.live_display_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('pre_flat_field_frames',
self._parameters_widget.pre_flat_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('post_flat_field_frames',
self._parameters_widget.post_flat_cbox,
bool,
None)
self._xray_imaging_mib.\
bind_value_update('apply_pre_flat_field_frames',
self._parameters_widget.apply_flat_cbox,
bool,
None)
def update_data_model(self, xray_imaging_parameters):
"""
Descript. :
"""
self._xray_imaging_parameters = xray_imaging_parameters
self._xray_imaging_mib.set_model(xray_imaging_parameters)
def __init__(self, parent = None, name = "parameter_widget"):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._char = None
self._char_params = queue_model_objects.CharacterisationParameters()
self._char_params_mib = DataModelInputBinder(self._char_params)
self._tree_view_item = None
self.previous_energy = None
self.add_dc_cb = None
# Graphic elements ----------------------------------------------------
rone_widget = QtGui.QWidget(self)
self.reference_img_widget = ReferenceImageWidget(rone_widget)
self.acq_widget = self.reference_img_widget.acq_widget
self.path_widget = self.reference_img_widget.path_widget
self.position_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
self.position_widget.setMinimumSize(450, 340)
rtwo_widget = QtGui.QWidget(self)
self.char_type_widget = CharTypeWidget(rtwo_widget)
self.routine_dc_widget = self.char_type_widget.routine_dc_page
self.sad_widget = self.char_type_widget.sad_page
self.rad_dmg_char_widget = self.char_type_widget.rad_damage_page
self.opt_parameters_widget = OptimisationParametersWidgetLayout(self)
rtree_widget = QtGui.QWidget(self)
self.rad_dmg_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_radiation_damage_model_widget_layout.ui'))
self.vertical_dimension_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
# Layout --------------------------------------------------------------
rone_widget_layout = QtGui.QHBoxLayout(self)
rone_widget_layout.addWidget(self.reference_img_widget)
rone_widget_layout.addWidget(self.position_widget)
#rone_widget_layout.addStretch(0)
rone_widget_layout.setSpacing(2)
rone_widget_layout.setContentsMargins(0, 0, 0, 0)
rone_widget.setLayout(rone_widget_layout)
rtwo_widget_layout = QtGui.QHBoxLayout(self)
rtwo_widget_layout.addWidget(self.char_type_widget)
rtwo_widget_layout.addWidget(self.opt_parameters_widget)
rtwo_widget_layout.addStretch(0)
rtwo_widget_layout.setSpacing(2)
rtwo_widget_layout.setContentsMargins(0, 0, 0, 0)
rtwo_widget.setLayout(rtwo_widget_layout)
rtree_widget_layout = QtGui.QHBoxLayout(self)
rtree_widget_layout.addWidget(self.rad_dmg_widget)
rtree_widget_layout.addWidget(self.vertical_dimension_widget)
rtree_widget_layout.addStretch(0)
rtree_widget_layout.setSpacing(2)
rtree_widget_layout.setContentsMargins(0, 0, 0, 0)
rtree_widget.setLayout(rtree_widget_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(rone_widget)
_main_vlayout.addWidget(rtwo_widget)
_main_vlayout.addWidget(rtree_widget)
_main_vlayout.setSpacing(2)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies -------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.toggle_permitted_range(self.opt_parameters_widget.\
opt_param_widget.permitted_range_cbx.isChecked())
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx.\
toggled.connect(self.toggle_permitted_range)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update('min_dose',
self.routine_dc_widget.dose_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_time',
self.routine_dc_widget.time_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('use_min_dose',
self.routine_dc_widget.min_dose_radio,
bool,
None)
self._char_params_mib.bind_value_update('use_min_time',
self.routine_dc_widget.min_time_radio,
bool,
None)
self._char_params_mib.bind_value_update('account_rad_damage',
self.routine_dc_widget.radiation_damage_cbx,
bool,
None)
self._char_params_mib.bind_value_update('auto_res',
self.sad_widget.automatic_resolution_radio,
bool,
None)
self._char_params_mib.bind_value_update('sad_res',
self.sad_widget.sad_resolution_ledit,
float,
QtGui.QDoubleValidator(0.5, 20, 3, self))
self._char_params_mib.bind_value_update('opt_sad',
self.sad_widget.optimised_sad_cbx,
bool,
None)
self._char_params_mib.bind_value_update('determine_rad_params',
self.rad_dmg_char_widget.rad_damage_cbx,
bool,
None)
self._char_params_mib.bind_value_update('burn_osc_start',
self.rad_dmg_char_widget.burn_osc_start_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('burn_osc_interval',
self.rad_dmg_char_widget.burn_osc_interval_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'use_aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(\
'aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_i_sigma',
self.opt_parameters_widget.opt_param_widget.i_over_sigma_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_completness',
self.opt_parameters_widget.opt_param_widget.aimed_comp_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'strategy_complexity',
self.opt_parameters_widget.opt_param_widget.start_comp_cbox,
int,
None)
self._char_params_mib.bind_value_update(
'use_permitted_rotation',
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx,
bool,
None)
self._char_params_mib.bind_value_update(
'permitted_phi_start',
self.opt_parameters_widget.opt_param_widget.phi_start_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'permitted_phi_end',
self.opt_parameters_widget.opt_param_widget.phi_end_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'low_res_pass_strat',
self.opt_parameters_widget.opt_param_widget.low_res_pass_cbx,
bool,
None)
self._char_params_mib.bind_value_update('rad_suscept',
self.rad_dmg_widget.sensetivity_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('beta',
self.rad_dmg_widget.beta_over_gray_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('gamma',
self.rad_dmg_widget.gamma_over_gray_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('max_crystal_vdim',
self.vertical_dimension_widget.max_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_crystal_vdim',
self.vertical_dimension_widget.min_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('min_crystal_vphi',
self.vertical_dimension_widget.min_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update('max_crystal_vphi',
self.vertical_dimension_widget.max_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
#self._char_params_mib.bind_value_update('space_group',
# self.vertical_dimension_widget.space_group_ledit,
# str,
# None)
self.vertical_dimension_widget.space_group_ledit.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self.char_type_widget.charact_type_tbox.currentChanged.connect(\
self.update_char_type)
self.rad_dmg_char_widget.rad_damage_cbx.toggled.connect(\
self.enable_opt_parameters_widget)
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx.\
toggled.connect(self.enable_maximum_res_ledit)
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx.\
toggled.connect(self.enable_aimed_mult_ledit)
self.path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
class CreateCharWidget(CreateTaskBase):
"""
Descript. :
"""
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
if not name:
self.setName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_gbox = QtGui.QGroupBox('Data location', self)
self._data_path_widget = DataPathWidget(self._data_path_gbox,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
gbox = self._char_widget.findChild(QtGui.QGroupBox,
"characterisation_gbox")
p = gbox.palette()
p.setColor(QtGui.QPalette.Window, QtCore.Qt.red)
p.setColor(QtGui.QPalette.Highlight, QtCore.Qt.red)
gbox.setPalette(p)
# Layout --------------------------------------------------------------
_data_path_gbox_layout = QtGui.QVBoxLayout(self)
_data_path_gbox_layout.addWidget(self._data_path_widget)
_data_path_gbox_layout.setSpacing(0)
_data_path_gbox_layout.setContentsMargins(0, 0, 0, 0)
self._data_path_gbox.setLayout(_data_path_gbox_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_gbox)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
self.connect(self._data_path_widget,
QtCore.SIGNAL("pathTemplateChanged"),
self.handle_path_conflict)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
def use_induced_burn(self, state):
"""
Descript. :
"""
self._acquisition_parameters.induce_burn = state
def _space_group_change(self, index):
"""
Descript. :
"""
self._char_params.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
"""
Descript. :
"""
index = 0
if space_group in XTAL_SPACEGROUPS:
index = XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self._vertical_dimension_widget.space_group_ledit.setCurrentIndex(
index)
def init_models(self):
"""
Descript. :
"""
CreateTaskBase.init_models(self)
self._init_models()
def _init_models(self):
"""
Descript. :
"""
self._char = queue_model_objects.Characterisation()
self._char_params = self._char.characterisation_parameters
self._processing_parameters = queue_model_objects.ProcessingParameters(
)
if self._beamline_setup_hwobj is not None:
self._acquisition_parameters = self._beamline_setup_hwobj.\
get_default_char_acq_parameters()
self._char_params = self._beamline_setup_hwobj.\
get_default_characterisation_parameters()
try:
transmission = self._beamline_setup_hwobj.transmission_hwobj.getAttFactor(
)
transmission = round(float(transmission), 1)
except AttributeError:
transmission = 0
try:
resolution = self._beamline_setup_hwobj.resolution_hwobj.getPosition(
)
resolution = round(float(resolution), 3)
except AttributeError:
resolution = 0
try:
energy = self._beamline_setup_hwobj.energy_hwobj.getCurrentEnergy(
)
energy = round(float(energy), 4)
except AttributeError:
energy = 0
self._acquisition_parameters.resolution = resolution
self._acquisition_parameters.energy = energy
self._acquisition_parameters.transmission = transmission
else:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters(
)
return
self._path_template.reference_image_prefix = 'ref'
# The num images drop down default value is 1
# we would like it to be 2
self._acquisition_parameters.num_images = 2
self._char.characterisation_software =\
queue_model_enumerables.COLLECTION_ORIGIN.EDNA
self._path_template.num_files = 2
self._acquisition_parameters.shutterless = False
def single_item_selection(self, tree_item):
"""
Descript. :
"""
CreateTaskBase.single_item_selection(self, tree_item)
if isinstance(tree_item, Qt4_queue_item.SampleQueueItem):
self._init_models()
self._set_space_group(self._char_params.space_group)
self._acq_widget.update_data_model(self._acquisition_parameters,
self._path_template)
self._char_params_mib.set_model(self._char_params)
#self._char_params = copy.deepcopy(self._char_params)
#self._acquisition_parameters = copy.deepcopy(self._acquisition_parameters)
elif isinstance(tree_item, Qt4_queue_item.CharacterisationQueueItem):
if tree_item.get_model().is_executed():
self.setDisabled(True)
else:
self.setDisabled(False)
self._char = tree_item.get_model()
if self._char.get_path_template():
self._path_template = self._char.get_path_template()
self._data_path_widget.update_data_model(self._path_template)
data_collection = self._char.reference_image_collection
self._char_params = self._char.characterisation_parameters
self._char_params_mib.set_model(self._char_params)
self._acquisition_parameters = data_collection.acquisitions[0].\
acquisition_parameters
self._acq_widget.update_data_model(self._acquisition_parameters,
self._path_template)
self.get_acquisition_widget().use_osc_start(True)
if len(data_collection.acquisitions) == 1:
self.select_shape_with_cpos(self._acquisition_parameters.\
centred_position)
self._processing_parameters = data_collection.processing_parameters
else:
self.setDisabled(True)
def update_processing_parameters(self, crystal):
"""
Descript. :
"""
self._processing_parameters.space_group = crystal.space_group
self._char_params.space_group = crystal.space_group
self._processing_parameters.cell_a = crystal.cell_a
self._processing_parameters.cell_alpha = crystal.cell_alpha
self._processing_parameters.cell_b = crystal.cell_b
self._processing_parameters.cell_beta = crystal.cell_beta
self._processing_parameters.cell_c = crystal.cell_c
self._processing_parameters.cell_gamma = crystal.cell_gamma
def approve_creation(self):
"""
Descript. :
"""
result = CreateTaskBase.approve_creation(self)
selected_shapes = self._graphics_manager_hwobj.get_selected_shapes()
for shape in selected_shapes:
if isinstance(shape, Qt4_GraphicsManager.GraphicsItemPoint):
result = True
return result
# Called by the owning widget (task_toolbox_widget) to create
# a collection. when a data collection group is selected.
def _create_task(self, sample, shape):
"""
Descript. :
"""
tasks = []
if not shape:
cpos = queue_model_objects.CentredPosition()
cpos.snapshot_image = self._graphics_manager_hwobj.get_snapshot()
else:
# Shapes selected and sample is mounted, get the
# centred positions for the shapes
if isinstance(shape, Qt4_GraphicsManager.GraphicsItemPoint):
snapshot = self._graphics_manager_hwobj.\
get_snapshot([shape])
cpos = copy.deepcopy(shape.get_centred_positions()[0])
cpos.snapshot_image = snapshot
char_params = copy.deepcopy(self._char_params)
acq = self._create_acq(sample)
dc = queue_model_objects.\
DataCollection([acq], sample.crystals[0],
self._processing_parameters)
# Reference images for characterisations should be taken 90 deg apart
# this is achived by setting overap to -89
acq.acquisition_parameters.overlap = -89
acq.acquisition_parameters.centred_position = cpos
dc.acquisitions[0] = acq
dc.experiment_type = queue_model_enumerables.EXPERIMENT_TYPE.EDNA_REF
char = queue_model_objects.Characterisation(dc, char_params)
char.set_name(dc.acquisitions[0].\
path_template.get_prefix())
char.set_number(dc.acquisitions[0].\
path_template.run_number)
tasks.append(char)
self._path_template.run_number += 1
return tasks
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.acq_widget.inverse_beam_cbx.hide()
self.acq_widget.subwedge_size_label.hide()
self.acq_widget.subwedge_size_ledit.hide()
else:
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.acq_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget.energies_combo.activated.connect(self.energy_selected)
self.acq_widget.mad_cbox.toggled.connect(self.use_mad)
self.acq_widget.inverse_beam_cbx.toggled.connect(
self.set_use_inverse_beam)
self.acq_widget.first_image_ledit.textChanged.connect(
self.first_image_ledit_change)
self.acq_widget.num_images_ledit.textChanged.connect(
self.num_images_ledit_change)
overlap_ledit = self.acq_widget.findChild(QtGui.QLineEdit,
"overlap_ledit")
if overlap_ledit is not None:
overlap_ledit.textChanged.connect(self.overlap_changed)
self.acq_widget.subwedge_size_ledit.textChanged.connect(
self.subwedge_size_ledit_change)
self.acq_widget.osc_start_cbox.toggled.connect(
self.osc_start_cbox_click)
# Other ---------------------------------------------------------------
self.acq_widget.subwedge_size_ledit.setDisabled(True)
self.acq_widget.energies_combo.setDisabled(True)
self.acq_widget.energies_combo.addItems(
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.acq_widget.osc_start_ledit.setEnabled(False)
self.osc_start_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 4, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(
0.0001, 10000, 4, self)
self.first_img_validator = QtGui.QIntValidator(0, 99999, self)
self.num_img_validator = QtGui.QIntValidator(1, 99999, self)
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, "Characterisation")
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = AcquisitionWidgetSimple(
self, acq_params=self._acquisition_parameters, path_template=self._path_template
)
self._data_path_widget = DataPathWidget(self, data_model=self._path_template, layout="vertical")
self._vertical_dimension_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__), "ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui")
)
self._char_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__), "ui_files/Qt4_characterise_simple_widget_vertical_layout.ui")
)
# Layout --------------------------------------------------------------
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
_main_vlayout.setSpacing(2)
_main_vlayout.addStretch(10)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.connect(self.acq_parameters_changed)
self._acq_widget.acqParametersChangedSignal.connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.connect(self._space_group_change)
# self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(self.characterisation_gbox_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update("opt_sad", self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update("account_rad_damage", self._char_widget.account_rad_dmg_cbx, bool, None)
# self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update("strategy_complexity", self._char_widget.start_comp_cbox, int, None)
self._char_params_mib.bind_value_update(
"max_crystal_vdim",
self._vertical_dimension_widget.max_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self),
)
self._char_params_mib.bind_value_update(
"min_crystal_vdim",
self._vertical_dimension_widget.min_vdim_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self),
)
self._char_params_mib.bind_value_update(
"min_crystal_vphi",
self._vertical_dimension_widget.min_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self),
)
self._char_params_mib.bind_value_update(
"max_crystal_vphi",
self._vertical_dimension_widget.max_vphi_ledit,
float,
QtGui.QDoubleValidator(0.0, 1000, 2, self),
)
self._vertical_dimension_widget.space_group_ledit.addItems(XTAL_SPACEGROUPS)
def __init__(self,parent = None,name = None, fl = 0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_widget = DataPathWidget(self,
data_model = self._path_template, layout = 'vertical')
self._vertical_dimension_widget = loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = loadUi(os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(2, 2, 2, 2)
_main_vlayout.setSpacing(6)
_main_vlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.\
connect(self.path_template_changed)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(\
self.characterisation_gbox_toggled)
self._char_widget.wait_result_cbx.toggled.connect(\
self.wait_results_cbx_toggled)
self._char_widget.execute_plan_cbx.toggled.connect(\
self.run_diffraction_plan_cbx_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx,
bool, None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox,
int, None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
queue_model_enumerables.XTAL_SPACEGROUPS
)
self._data_path_widget.data_path_layout.compression_cbox.setVisible(False)
class ProcessingWidget(QWidget):
enableProcessingSignal = pyqtSignal(bool, bool)
def __init__(self, parent=None, name=None, fl=0, data_model=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.processing_widget.space_group_combo.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.a_ledit,
float, None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.alpha_ledit,
float, None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.b_ledit,
float, None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.beta_ledit,
float, None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.c_ledit,
float, None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.gamma_ledit,
float, None)
self._model_mib.bind_value_update(
'num_residues', self.processing_widget.num_residues_ledit, float,
None)
self.processing_widget.space_group_combo.activated.\
connect(self._space_group_change)
self.processing_widget.run_processing_after_cbox.stateChanged.\
connect(self._run_processing_after_toggled)
self.processing_widget.run_processing_parallel_cbox.stateChanged.\
connect(self._run_processing_parallel_toggled)
def _space_group_change(self, index):
self._model.space_group = queue_model_enumerables.\
XTAL_SPACEGROUPS[index]
def _set_space_group(self, space_group):
index = 0
if space_group in queue_model_enumerables.XTAL_SPACEGROUPS:
index = queue_model_enumerables.XTAL_SPACEGROUPS.index(space_group)
self._space_group_change(index)
self.processing_widget.space_group_combo.setCurrentIndex(index)
def update_data_model(self, model):
self._model = model
self._model_mib.set_model(model)
self._set_space_group(model.space_group)
def _run_processing_after_toggled(self, state):
self.enableProcessingSignal.emit(\
self.processing_widget.run_processing_after_cbox.isChecked(),
self.processing_widget.run_processing_parallel_cbox.isChecked())
def _run_processing_parallel_toggled(self, state):
self.enableProcessingSignal.emit(\
self.processing_widget.run_processing_after_cbox.isChecked(),
self.processing_widget.run_processing_parallel_cbox.isChecked())
