def populate_widget(self, beam_energies={}, **kw):
data_object = self._data_object = GphlAcquisitionData()
parameter_mib = self._parameter_mib = DataModelInputBinder(data_object)
widget_data = self._widget_data
skip_fields = []
for tag in self.beam_energy_tags[len(beam_energies):]:
skip_fields.append(tag)
skip_fields.append(self._get_label_name(tag))
if not beam_energies:
skip_fields.append('beam_energies_label')
for tag, tt in widget_data.items():
if tag in skip_fields:
tt[0].hide()
else:
widget, w_type, validator, value = tt
widget.show()
if tag in kw:
value = kw[tag]
elif tag in self.beam_energy_tags:
ii = self.beam_energy_tags.index(tag)
if ii < len(beam_energies):
name = list(beam_energies)[ii]
value = beam_energies[name]
label_tag = self._get_label_name(tag)
setattr(data_object, label_tag, name)
setattr(data_object, tag, value)
parameter_mib.bind_value_update(tag, widget, w_type, validator)
parameter_mib.init_bindings()
def __init__(self,
parent=None,
name='',
fl=0,
data_model=None,
layout=None):
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._base_image_dir = None
self._base_process_dir = None
self.path_conflict_state = False
if data_model is None:
self._data_model = queue_model_objects.PathTemplate()
else:
self._data_model = data_model
self._data_model_pm = DataModelInputBinder(self._data_model)
# Graphic elements ----------------------------------------------------
if layout == "vertical":
self.data_path_layout = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_vertical_layout.ui"))
else:
self.data_path_layout = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_data_path_widget_horizontal_layout.ui"))
# Layout --------------------------------------------------------------
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.data_path_layout)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
# Qt signal/slot connections ------------------------------------------
self.data_path_layout.prefix_ledit.textChanged.connect(
self._prefix_ledit_change)
self.data_path_layout.run_number_ledit.textChanged.connect(
self._run_number_ledit_change)
self.data_path_layout.browse_button.clicked.connect(
self._browse_clicked)
self.data_path_layout.folder_ledit.textChanged.connect(
self._folder_ledit_change)
# Other ---------------------------------------------------------------
self._data_model_pm.bind_value_update(
'base_prefix', self.data_path_layout.prefix_ledit, str, None)
self._data_model_pm.bind_value_update(
'run_number', self.data_path_layout.run_number_ledit, int,
QtGui.QIntValidator(0, 1000, self))
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
if isinstance(tree_view_item, Qt4_queue_item.XrayCenteringQueueItem):
self._data_collection = tree_view_item.get_model().reference_image_collection
else:
self._data_collection = tree_view_item.get_model()
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = data_collection.acquisitions[
0].path_template
self._acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self._acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self._data_path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self._processing_widget.update_data_model(data_collection.\
processing_parameters)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("GUI").warning(msg)
def __init__(self, parent=None, name=None, fl=0, data_model=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
if data_model is None:
self._model = queue_model_objects.ProcessingParameters()
else:
self._model = data_model
self._model_mib = DataModelInputBinder(self._model)
self.processing_widget = self.acq_widget_layout = loadUi(
os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_processing_widget_vertical_layout.ui"))
self.main_layout = QVBoxLayout(self)
self.main_layout.addWidget(self.processing_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.processing_widget.space_group_combo.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self._model_mib.bind_value_update('cell_a',
self.processing_widget.a_ledit,
float, None)
self._model_mib.bind_value_update('cell_alpha',
self.processing_widget.alpha_ledit,
float, None)
self._model_mib.bind_value_update('cell_b',
self.processing_widget.b_ledit,
float, None)
self._model_mib.bind_value_update('cell_beta',
self.processing_widget.beta_ledit,
float, None)
self._model_mib.bind_value_update('cell_c',
self.processing_widget.c_ledit,
float, None)
self._model_mib.bind_value_update('cell_gamma',
self.processing_widget.gamma_ledit,
float, None)
self._model_mib.bind_value_update(
'num_residues', self.processing_widget.num_residues_ledit, float,
None)
self.processing_widget.space_group_combo.activated.\
connect(self._space_group_change)
self.processing_widget.run_processing_after_cbox.stateChanged.\
connect(self._run_processing_after_toggled)
self.processing_widget.run_processing_parallel_cbox.stateChanged.\
connect(self._run_processing_parallel_toggled)
def __init__(self, parent = None, name = None, fl = 0, acq_params = None,
path_template = None, layout = None):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(self._acquisition_parameters)
self.acq_widget = uic.loadUi(os.path.join(os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_simple_layout.ui"))
# Layout --------------------------------------------------------------
main_layout = QtGui.QVBoxLayout(self)
main_layout.addWidget(self.acq_widget)
main_layout.setSpacing(0)
main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(main_layout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget.num_images_cbox.activated.connect(self.update_num_images)
self.acq_widget.detector_mode_combo.activated.connect(self.detector_mode_changed)
self.acq_widget.osc_start_cbox.toggled.connect(self.osc_start_cbox_click)
# Other ---------------------------------------------------------------
self.energy_validator = QtGui.QDoubleValidator(0, 25, 5, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(0, 10000, 5, self)
self.acq_widget.osc_start_ledit.setEnabled(False)
self.acq_widget.kappa_ledit.setEnabled(False)
self.acq_widget.kappa_phi_ledit.setEnabled(False)
self.acq_widget.num_images_cbox.setCurrentIndex(1)
def populate_widget(self, item):
data_collection = item.get_model()
self._tree_view_item = item
self._data_collection = data_collection
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self.path_widget._data_model = data_collection.acquisitions[
0].path_template
self.acq_widget.set_energies(
data_collection.crystal.energy_scan_result)
self.acq_widget.update_data_model(data_collection.acquisitions[0].\
acquisition_parameters,
data_collection.acquisitions[0].\
path_template)
self.acq_widget.use_osc_start(True)
self.path_widget.update_data_model(data_collection.\
acquisitions[0].path_template)
self.processing_widget.update_data_model(data_collection.\
processing_parameters)
if data_collection.acquisitions[0].acquisition_parameters.\
centred_position.snapshot_image:
image = data_collection.acquisitions[0].\
acquisition_parameters.centred_position.snapshot_image
ration = image.height() / float(image.width())
image = image.scaled(400, 400 * ration, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def populate_widget(self, tree_view_item):
self._tree_view_item = tree_view_item
advanced_model = tree_view_item.get_model()
self._data_collection = advanced_model.reference_image_collection
executed = self._data_collection.is_executed()
self._acq_widget.setEnabled(not executed)
self._data_path_widget.setEnabled(not executed)
image = advanced_model.grid_object.get_snapshot()
try:
image = image.scaled(427, 320, QtCore.Qt.KeepAspectRatio)
self.position_widget.svideo.setPixmap(QtGui.QPixmap(image))
except:
pass
self._acquisition_mib = DataModelInputBinder(self._data_collection.\
acquisitions[0].acquisition_parameters)
# The acq_widget sends a signal to the path_widget, and it relies
# on that both models upto date, we need to refactor this part
# so that both models are set before taking ceratin actions.
# This workaround, works for the time beeing.
self._data_path_widget._data_model = self._data_collection.\
acquisitions[0].path_template
self._data_path_widget.update_data_model(self._data_collection.\
acquisitions[0].path_template)
self._acq_widget.update_data_model(\
self._data_collection.acquisitions[0].acquisition_parameters,
self._data_collection.acquisitions[0].path_template)
#self._acq_widget.use_osc_start(False)
invalid = self._acquisition_mib.validate_all()
if invalid:
msg = "This data collection has one or more incorrect parameters,"+\
" correct the fields marked in red to solve the problem."
logging.getLogger("user_level_log").\
warning(msg)
def __init__(self, parent=None, name=None, fl=0, xray_imaging_params=None):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if xray_imaging_params is None:
self._xray_imaging_parameters = \
queue_model_objects.XrayImagingParameters()
else:
self._xray_imaging_parameters = xray_imaging_params
self._xray_imaging_mib = DataModelInputBinder(
self._xray_imaging_parameters)
self._parameters_widget = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_xray_imaging_parameters_widget_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self._parameters_widget)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent, QtCore.Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.acq_widget.inverse_beam_cbx.hide()
self.acq_widget.subwedge_size_label.hide()
self.acq_widget.subwedge_size_ledit.hide()
else:
self.acq_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
self.main_layout = QtGui.QVBoxLayout(self)
self.main_layout.addWidget(self.acq_widget)
self.main_layout.setSpacing(0)
self.main_layout.setContentsMargins(0, 0, 0, 0)
self.setLayout(self.main_layout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget.energies_combo.activated.connect(self.energy_selected)
self.acq_widget.mad_cbox.toggled.connect(self.use_mad)
self.acq_widget.inverse_beam_cbx.toggled.connect(
self.set_use_inverse_beam)
self.acq_widget.first_image_ledit.textChanged.connect(
self.first_image_ledit_change)
self.acq_widget.num_images_ledit.textChanged.connect(
self.num_images_ledit_change)
overlap_ledit = self.acq_widget.findChild(QtGui.QLineEdit,
"overlap_ledit")
if overlap_ledit is not None:
overlap_ledit.textChanged.connect(self.overlap_changed)
self.acq_widget.subwedge_size_ledit.textChanged.connect(
self.subwedge_size_ledit_change)
self.acq_widget.osc_start_cbox.toggled.connect(
self.osc_start_cbox_click)
# Other ---------------------------------------------------------------
self.acq_widget.subwedge_size_ledit.setDisabled(True)
self.acq_widget.energies_combo.setDisabled(True)
self.acq_widget.energies_combo.addItems(
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.acq_widget.osc_start_ledit.setEnabled(False)
self.osc_start_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.osc_range_validator = QtGui.QDoubleValidator(
-10000, 10000, 4, self)
self.kappa_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.kappa_phi_validator = QtGui.QDoubleValidator(0, 360, 4, self)
self.energy_validator = QtGui.QDoubleValidator(0, 25, 4, self)
self.resolution_validator = QtGui.QDoubleValidator(0, 15, 3, self)
self.transmission_validator = QtGui.QDoubleValidator(0, 100, 3, self)
self.exp_time_validator = QtGui.QDoubleValidator(
0.0001, 10000, 4, self)
self.first_img_validator = QtGui.QIntValidator(0, 99999, self)
self.num_img_validator = QtGui.QIntValidator(1, 99999, self)
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
self.setObjectName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._vertical_dimension_widget = None
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_widget = DataPathWidget(self,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
# Layout --------------------------------------------------------------
_main_vlayout = QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_widget)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setContentsMargins(2, 2, 2, 2)
_main_vlayout.setSpacing(6)
_main_vlayout.addStretch(0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self._data_path_widget.pathTemplateChangedSignal.\
connect(self.path_template_changed)
self._acq_widget.acqParametersChangedSignal.\
connect(self.acq_parameters_changed)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
#self.connect(induced_burn_cbx, QtCore.SIGNAL("toggled(bool)"),
# self.use_induced_burn)
self._char_widget.characterisation_gbox.toggled.connect(\
self.characterisation_gbox_toggled)
self._char_widget.wait_result_cbx.toggled.connect(\
self.wait_results_cbx_toggled)
self._char_widget.execute_plan_cbx.toggled.connect(\
self.run_diffraction_plan_cbx_toggled)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
def __init__(self,
parent=None,
name=None,
fl=0,
acq_params=None,
path_template=None,
layout='horizontal'):
QWidget.__init__(self, parent, Qt.WindowFlags(fl))
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
self._beamline_setup_hwobj = None
self._diffractometer_hwobj = None
# Internal variables --------------------------------------------------
self.previous_energy = 0
# If the acq. widget is used with grids then total osc range is not
# equal to num_images * osc_range, but num_images_per_line * osc_range
# For grids the osc total range is updated when a grid is selected
self.grid_mode = False
# Properties ----------------------------------------------------------
# Signals -------------------------------------------------------------
# Slots ---------------------------------------------------------------
# Graphic elements ----------------------------------------------------
if acq_params is None:
self._acquisition_parameters = queue_model_objects.\
AcquisitionParameters()
else:
self._acquisition_parameters = acq_params
if path_template is None:
self._path_template = queue_model_objects.PathTemplate()
else:
self._path_template = path_template
self._acquisition_mib = DataModelInputBinder(
self._acquisition_parameters)
if layout == "horizontal":
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_horizontal_layout.ui"))
self.use_osc_start(False)
else:
self.acq_widget_layout = loadUi(os.path.join(\
os.path.dirname(__file__),
"ui_files/Qt4_acquisition_widget_vertical_layout.ui"))
# Layout --------------------------------------------------------------
__main_vlayout = QVBoxLayout(self)
__main_vlayout.addWidget(self.acq_widget_layout)
__main_vlayout.setSpacing(0)
__main_vlayout.setContentsMargins(0, 0, 0, 0)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.acq_widget_layout.osc_start_cbox.stateChanged.connect(\
self.fix_osc_start)
self.acq_widget_layout.exp_time_ledit.textChanged.connect(\
self.exposure_time_ledit_changed)
self.acq_widget_layout.first_image_ledit.textChanged.connect(\
self.first_image_ledit_change)
self.acq_widget_layout.num_images_ledit.textChanged.connect(\
self.num_images_ledit_change)
self.acq_widget_layout.detector_roi_mode_combo.activated.connect(\
self.detector_roi_mode_changed)
self.acq_widget_layout.energies_combo.activated.connect(\
self.energy_selected)
self.acq_widget_layout.mad_cbox.toggled.connect(\
self.use_mad)
self.acq_widget_layout.osc_start_ledit.textEdited.connect(\
self.osc_start_ledit_changed)
self.acq_widget_layout.osc_range_ledit.textEdited.connect(\
self.osc_range_per_frame_ledit_changed)
self.acq_widget_layout.osc_total_range_ledit.textEdited.connect(\
self.osc_total_range_ledit_changed)
self.acq_widget_layout.energy_ledit.textEdited.connect(\
self.energy_ledit_changed)
self.acq_widget_layout.transmission_ledit.textEdited.connect(\
self.transmission_ledit_changed)
self.acq_widget_layout.resolution_ledit.textEdited.connect(\
self.resolution_ledit_changed)
self.acq_widget_layout.kappa_ledit.textEdited.connect(\
self.kappa_ledit_changed)
self.acq_widget_layout.kappa_phi_ledit.textEdited.connect(\
self.kappa_phi_ledit_changed)
if self.acq_widget_layout.findChild(QLineEdit, "overlap_ledit"):
self.acq_widget_layout.overlap_ledit.textChanged.connect(\
self.overlap_changed)
if self.acq_widget_layout.findChild(QCheckBox, "max_osc_range_cbx"):
self.acq_widget_layout.max_osc_range_cbx.toggled.connect(\
self.max_osc_range_toggled)
# Other ---------------------------------------------------------------
self.value_changed_list = []
self.acq_widget_layout.energies_combo.setDisabled(True)
self.acq_widget_layout.energies_combo.addItems(\
['ip: -', 'pk: -', 'rm1: -', 'rm2: -'])
self.osc_start_validator = QDoubleValidator(\
-10000, 10000, 4, self.acq_widget_layout.osc_start_ledit)
self.osc_range_per_frame_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_range_ledit)
self.osc_total_range_validator = QDoubleValidator(\
0, 10000, 4, self.acq_widget_layout.osc_total_range_ledit)
self.kappa_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_ledit)
self.kappa_phi_validator = QDoubleValidator(\
0, 360, 4, self.acq_widget_layout.kappa_phi_ledit)
self.energy_validator = QDoubleValidator(\
4, 25, 4, self.acq_widget_layout.energy_ledit)
self.resolution_validator = QDoubleValidator(\
0, 15, 3, self.acq_widget_layout.resolution_ledit)
self.transmission_validator = QDoubleValidator(\
0, 100, 3, self.acq_widget_layout.transmission_ledit)
self.exp_time_validator = QDoubleValidator(\
0.0001, 10000, 7, self.acq_widget_layout.exp_time_ledit)
self.first_img_validator = QIntValidator(\
0, 99999, self.acq_widget_layout.first_image_ledit)
self.num_img_validator = QIntValidator(\
1, 99999, self.acq_widget_layout.num_images_ledit)
self.acq_widget_layout.detector_roi_mode_label.setEnabled(False)
self.acq_widget_layout.detector_roi_mode_combo.setEnabled(False)
def __init__(self, *args):
"""
Descript. :
"""
BlissWidget.__init__(self, *args)
# Internal variables ------------------------------------------------
self.sample = queue_model_objects.Sample()
self.crystal = self.sample.crystals[0]
self.sample_mib = DataModelInputBinder(self.sample)
self.crystal_mib = DataModelInputBinder(self.crystal)
# Signals ------------------------------------------------------------
# Slots --------------------------------------------------------------
self.defineSlot("populate_sample_details", ({}))
# Graphic elements ----------------------------------------------------
_info_widget = QWidget(self)
self.crystal_widget = loadUi(\
os.path.join(os.path.dirname(__file__),
"widgets/ui_files/Qt4_crystal_widget_layout.ui"))
self.sample_info_widget = loadUi(
os.path.join(os.path.dirname(__file__),
"widgets/ui_files/Qt4_sample_info_widget_layout.ui"))
#self.ispyb_sample_info_widget = ISPyBSampleInfoWidget(self)
# Layout --------------------------------------------------------------
_info_widget_hlayout = QHBoxLayout(_info_widget)
_info_widget_hlayout.addWidget(self.sample_info_widget)
_info_widget_hlayout.addWidget(self.crystal_widget)
_info_widget_hlayout.addStretch(0)
_info_widget_hlayout.setSpacing(0)
_info_widget_hlayout.setContentsMargins(2, 2, 2, 2)
_main_hlayout = QVBoxLayout(self)
_main_hlayout.addWidget(_info_widget)
#_main_hlayout.addWidget(self.ispyb_sample_info_widget)
_main_hlayout.addStretch(0)
_main_hlayout.setSpacing(0)
_main_hlayout.setContentsMargins(2, 2, 2, 2)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self.crystal_mib.bind_value_update(
'space_group', self.crystal_widget.space_group_value_label, str,
None)
self.crystal_mib.bind_value_update(
'protein_acronym', self.crystal_widget.protein_acronym_value_label,
str, None)
self.crystal_mib.bind_value_update('cell_a',
self.crystal_widget.a_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_alpha', self.crystal_widget.alpha_value_label, str, None)
self.crystal_mib.bind_value_update('cell_b',
self.crystal_widget.b_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_beta', self.crystal_widget.beta_value_label, str, None)
self.crystal_mib.bind_value_update('cell_c',
self.crystal_widget.c_value_label,
str, None)
self.crystal_mib.bind_value_update(
'cell_gamma', self.crystal_widget.gamma_value_label, str, None)
self.sample_mib.bind_value_update(
'name', self.sample_info_widget.name_value_label, str, None)
self.sample_mib.bind_value_update(
'code', self.sample_info_widget.data_matrix_value_label, str, None)
self.sample_mib.bind_value_update(
'holder_length', self.sample_info_widget.holder_length_value_label,
str, None)
self.sample_mib.bind_value_update(
'lims_sample_location',
self.sample_info_widget.sample_location_value_label, str, None)
self.sample_mib.bind_value_update(
'lims_container_location',
self.sample_info_widget.basket_location_value_label, str, None)
def __init__(self, parent=None, name="parameter_widget"):
"""
Descript. :
"""
QtGui.QWidget.__init__(self, parent)
if name is not None:
self.setObjectName(name)
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._char = None
self._char_params = queue_model_objects.CharacterisationParameters()
self._char_params_mib = DataModelInputBinder(self._char_params)
self._tree_view_item = None
self.previous_energy = None
self.add_dc_cb = None
# Graphic elements ----------------------------------------------------
rone_widget = QtGui.QWidget(self)
self.reference_img_widget = ReferenceImageWidget(rone_widget)
self.acq_widget = self.reference_img_widget.acq_widget
self.path_widget = self.reference_img_widget.path_widget
self.position_widget = uic.loadUi(
os.path.join(os.path.dirname(__file__),
'ui_files/Qt4_snapshot_widget_layout.ui'))
self.position_widget.setMinimumSize(450, 340)
rtwo_widget = QtGui.QWidget(self)
self.char_type_widget = CharTypeWidget(rtwo_widget)
self.routine_dc_widget = self.char_type_widget.routine_dc_page
self.sad_widget = self.char_type_widget.sad_page
self.rad_dmg_char_widget = self.char_type_widget.rad_damage_page
self.opt_parameters_widget = OptimisationParametersWidgetLayout(self)
rtree_widget = QtGui.QWidget(self)
self.rad_dmg_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_radiation_damage_model_widget_layout.ui'))
self.vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
# Layout --------------------------------------------------------------
rone_widget_layout = QtGui.QHBoxLayout(self)
rone_widget_layout.addWidget(self.reference_img_widget)
rone_widget_layout.addWidget(self.position_widget)
#rone_widget_layout.addStretch(0)
rone_widget_layout.setSpacing(2)
rone_widget_layout.setContentsMargins(0, 0, 0, 0)
rone_widget.setLayout(rone_widget_layout)
rtwo_widget_layout = QtGui.QHBoxLayout(self)
rtwo_widget_layout.addWidget(self.char_type_widget)
rtwo_widget_layout.addWidget(self.opt_parameters_widget)
rtwo_widget_layout.addStretch(0)
rtwo_widget_layout.setSpacing(2)
rtwo_widget_layout.setContentsMargins(0, 0, 0, 0)
rtwo_widget.setLayout(rtwo_widget_layout)
rtree_widget_layout = QtGui.QHBoxLayout(self)
rtree_widget_layout.addWidget(self.rad_dmg_widget)
rtree_widget_layout.addWidget(self.vertical_dimension_widget)
rtree_widget_layout.addStretch(0)
rtree_widget_layout.setSpacing(2)
rtree_widget_layout.setContentsMargins(0, 0, 0, 0)
rtree_widget.setLayout(rtree_widget_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(rone_widget)
_main_vlayout.addWidget(rtwo_widget)
_main_vlayout.addWidget(rtree_widget)
_main_vlayout.setSpacing(2)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies -------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
self.toggle_permitted_range(self.opt_parameters_widget.\
opt_param_widget.permitted_range_cbx.isChecked())
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx.\
toggled.connect(self.toggle_permitted_range)
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'min_dose', self.routine_dc_widget.dose_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_time', self.routine_dc_widget.time_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_min_dose', self.routine_dc_widget.min_dose_radio, bool, None)
self._char_params_mib.bind_value_update(
'use_min_time', self.routine_dc_widget.min_time_radio, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self.routine_dc_widget.radiation_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'auto_res', self.sad_widget.automatic_resolution_radio, bool, None)
self._char_params_mib.bind_value_update(
'sad_res', self.sad_widget.sad_resolution_ledit, float,
QtGui.QDoubleValidator(0.5, 20, 3, self))
self._char_params_mib.bind_value_update(
'opt_sad', self.sad_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'determine_rad_params', self.rad_dmg_char_widget.rad_damage_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'burn_osc_start', self.rad_dmg_char_widget.burn_osc_start_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'burn_osc_interval',
self.rad_dmg_char_widget.burn_osc_interval_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'use_aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'use_aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'aimed_resolution',
self.opt_parameters_widget.opt_param_widget.maximum_res_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(\
'aimed_multiplicity',
self.opt_parameters_widget.opt_param_widget.aimed_mult_ledit,
float,
QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_i_sigma',
self.opt_parameters_widget.opt_param_widget.i_over_sigma_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'aimed_completness',
self.opt_parameters_widget.opt_param_widget.aimed_comp_ledit,
float, QtGui.QDoubleValidator(0.01, 1000, 2, self))
self._char_params_mib.bind_value_update(
'strategy_complexity',
self.opt_parameters_widget.opt_param_widget.start_comp_cbox, int,
None)
self._char_params_mib.bind_value_update(
'use_permitted_rotation',
self.opt_parameters_widget.opt_param_widget.permitted_range_cbx,
bool, None)
self._char_params_mib.bind_value_update(
'permitted_phi_start',
self.opt_parameters_widget.opt_param_widget.phi_start_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'permitted_phi_end',
self.opt_parameters_widget.opt_param_widget.phi_end_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'low_res_pass_strat',
self.opt_parameters_widget.opt_param_widget.low_res_pass_cbx, bool,
None)
self._char_params_mib.bind_value_update(
'rad_suscept', self.rad_dmg_widget.sensetivity_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'beta', self.rad_dmg_widget.beta_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'gamma', self.rad_dmg_widget.gamma_over_gray_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vdim', self.vertical_dimension_widget.max_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vdim', self.vertical_dimension_widget.min_vdim_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'min_crystal_vphi', self.vertical_dimension_widget.min_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.bind_value_update(
'max_crystal_vphi', self.vertical_dimension_widget.max_vphi_ledit,
float, QtGui.QDoubleValidator(0.0, 1000, 2, self))
#self._char_params_mib.bind_value_update('space_group',
# self.vertical_dimension_widget.space_group_ledit,
# str,
# None)
self.vertical_dimension_widget.space_group_ledit.\
addItems(queue_model_enumerables.XTAL_SPACEGROUPS)
self.char_type_widget.charact_type_tbox.currentChanged.connect(\
self.update_char_type)
self.rad_dmg_char_widget.rad_damage_cbx.toggled.connect(\
self.enable_opt_parameters_widget)
self.opt_parameters_widget.opt_param_widget.maximum_res_cbx.\
toggled.connect(self.enable_maximum_res_ledit)
self.opt_parameters_widget.opt_param_widget.aimed_mult_cbx.\
toggled.connect(self.enable_aimed_mult_ledit)
self.path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self.path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self.vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
def __init__(self, parent=None, name=None, fl=0):
"""
Descript. :
"""
CreateTaskBase.__init__(self, parent, name, fl, 'Characterisation')
if not name:
self.setName("create_char_widget")
# Hardware objects ----------------------------------------------------
# Internal variables --------------------------------------------------
self._current_selected_item = None
self.init_models()
self._char_params_mib = DataModelInputBinder(self._char_params)
# Graphic elements ----------------------------------------------------
self._acq_widget = \
AcquisitionWidgetSimple(self, acq_params = self._acquisition_parameters,
path_template = self._path_template)
self._data_path_gbox = QtGui.QGroupBox('Data location', self)
self._data_path_widget = DataPathWidget(self._data_path_gbox,
data_model=self._path_template,
layout='vertical')
self._vertical_dimension_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_vertical_crystal_dimension_widget_layout.ui'))
self._char_widget = uic.loadUi(
os.path.join(
os.path.dirname(__file__),
'ui_files/Qt4_characterise_simple_widget_vertical_layout.ui'))
gbox = self._char_widget.findChild(QtGui.QGroupBox,
"characterisation_gbox")
p = gbox.palette()
p.setColor(QtGui.QPalette.Window, QtCore.Qt.red)
p.setColor(QtGui.QPalette.Highlight, QtCore.Qt.red)
gbox.setPalette(p)
# Layout --------------------------------------------------------------
_data_path_gbox_layout = QtGui.QVBoxLayout(self)
_data_path_gbox_layout.addWidget(self._data_path_widget)
_data_path_gbox_layout.setSpacing(0)
_data_path_gbox_layout.setContentsMargins(0, 0, 0, 0)
self._data_path_gbox.setLayout(_data_path_gbox_layout)
_main_vlayout = QtGui.QVBoxLayout(self)
_main_vlayout.addWidget(self._acq_widget)
_main_vlayout.addWidget(self._data_path_gbox)
_main_vlayout.addWidget(self._char_widget)
_main_vlayout.addWidget(self._vertical_dimension_widget)
_main_vlayout.setSpacing(0)
_main_vlayout.setContentsMargins(0, 0, 0, 0)
self.setLayout(_main_vlayout)
# SizePolicies --------------------------------------------------------
# Qt signal/slot connections ------------------------------------------
# Other ---------------------------------------------------------------
self._char_params_mib.bind_value_update(
'opt_sad', self._char_widget.optimised_sad_cbx, bool, None)
self._char_params_mib.bind_value_update(
'account_rad_damage', self._char_widget.account_rad_dmg_cbx, bool,
None)
#self._char_params_mib.bind_value_update('determine_rad_params',
# induced_burn_cbx,
# bool, None)
self._char_params_mib.bind_value_update(
'strategy_complexity', self._char_widget.start_comp_cbox, int,
None)
self._char_params_mib.\
bind_value_update('max_crystal_vdim',
self._vertical_dimension_widget.max_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vdim',
self._vertical_dimension_widget.min_vdim_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('min_crystal_vphi',
self._vertical_dimension_widget.min_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._char_params_mib.\
bind_value_update('max_crystal_vphi',
self._vertical_dimension_widget.max_vphi_ledit, float,
QtGui.QDoubleValidator(0.0, 1000, 2, self))
self._vertical_dimension_widget.space_group_ledit.addItems(
XTAL_SPACEGROUPS)
self._data_path_widget.data_path_layout.prefix_ledit.textChanged.\
connect(self._prefix_ledit_change)
self._data_path_widget.data_path_layout.run_number_ledit.textChanged.\
connect(self._run_number_ledit_change)
self._vertical_dimension_widget.space_group_ledit.activated.\
connect(self._space_group_change)
self.connect(self._data_path_widget,
QtCore.SIGNAL("pathTemplateChanged"),
self.handle_path_conflict)
