def geneCoor2transCoor(self, geneID, start, end):
"""
geneID -- Gene id
start -- Gene-based start position
end -- Gene-based end position
Convert gene-based coordinates to transcript-based coordinates
Return [chrID, chrStart, chrEnd, transID, transStart, transEnd], ... ]
"""
TransBin = self.getTransBin()
return CoorFunc.geneCoor2transCoor(TransBin, self, geneID, start, end)
def geneCoor2transCoor(self, GeneID, Start, End):
TransBin = self.getTransBin()
return CoorFunc.geneCoor2transCoor(TransBin, self, GeneID, Start, End)
def geneCoor2transCoor(self, GeneID, Start, End):
TransBin = self.getTransBin()
return CoorFunc.geneCoor2transCoor(TransBin, self, GeneID, Start, End)