def transCoor2geneCoor(self, transID, start, end):
"""
transID -- Transcript id
start -- Transcript-based start position
end -- Transcript-based end position
Convert transcript-based coordinates to gene-based coordinates
return [ [chrID, chrStart, chrEnd, geneID, geneStart, geneEnd], ... ]
"""
GeneBin = self.getGeneBin()
return CoorFunc.transCoor2geneCoor(GeneBin, self, transID, Start, End)
def transCoor2geneCoor(self, TransID, Start, End):
GeneBin = self.getGeneBin()
return CoorFunc.transCoor2geneCoor(GeneBin, self, TransID, Start, End)
def transCoor2geneCoor(self, TransID, Start, End):
GeneBin = self.getGeneBin()
return CoorFunc.transCoor2geneCoor(GeneBin, self, TransID, Start, End)