Esempio n. 1
0
 def test_maximum_clade_probability_consensus(self):
     ref_trees = list(Phylo.parse("./TreeConstruction/maximum_clade_probability_ref.tre", "newick"))
     consensus_tree = Consensus.maximum_clade_probability_consensus(self.trees)[0]
     self.assertTrue(Consensus._equal_topology(consensus_tree, ref_trees[0]))
     consensus_tree_mcmc = Consensus.maximum_clade_probability_consensus(self.mcmc_trees, mcmc=True)[0]
     self.assertTrue(Consensus._equal_topology(consensus_tree_mcmc, ref_trees[0]))