def cleanup(self): Executor.cleanup(self) if not self.debug: T.tryRemove(self.prosaPdbFile) T.tryRemove(self.f_in) T.tryRemove(self.prosaOutput + '.ana')
def cleanup( self ): Executor.cleanup( self ) if not self.debug: T.tryRemove( self.prosaPdbFile ) T.tryRemove( self.f_in) T.tryRemove( self.prosaOutput + '.ana' )
def cleanup( self ): """ Tidy up the mess you created. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_pdb )
def cleanup(self): """ Tidy up the mess you created. """ Executor.cleanup(self) if not self.debug: T.tryRemove(self.f_pdb)
def cleanup( self ): """ Remove temp files. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_xyzrn ) T.tryRemove( self.f_surf + '.area' )
def cleanup(self): """ remove temporary files """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.inp1 ) T.tryRemove( self.inp2 )
def cleanup(self): """ remove temporary files """ Executor.cleanup(self) if not self.debug: T.tryRemove(self.inp1) T.tryRemove(self.inp2)
def cleanup( self ): """ Tidy up the mess you created. Does nothing. No temporary files are created. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_pdbin ) T.tryRemove( self.f_out)
def cleanup(self): """ Tidy up the mess you created. Does nothing. No temporary files are created. """ Executor.cleanup(self) if not self.debug: T.tryRemove(self.f_pdbin) T.tryRemove(self.f_out)
def cleanup( self ): """ Tidy up the mess we created. Called after program execution. """ Executor.cleanup( self ) if not self.debug: ## remove all files created by intervor for f in glob.glob( self.f_prefix + '*' ): T.tryRemove( f )
def cleanup(self): """ Tidy up the mess we created. Called after program execution. """ Executor.cleanup(self) if not self.debug: ## remove all files created by intervor for f in glob.glob(self.f_prefix + '*'): T.tryRemove(f)
def cleanup(self): """ Tidy up the mess you created. """ Executor.cleanup(self) if not self.debug: T.tryRemove(self.f_ref) for i in range(len(self.models)): T.tryRemove(self.f_pdb % i)
def cleanup( self ): """ Tidy up the mess you created. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_ref ) for i in range( len(self.models)): T.tryRemove( self.f_pdb % i )
def cleanup( self ): """ Tidy up the mess you created. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_pdb, verbose=self.verbose ) T.tryRemove( self.f_out_name, verbose=self.verbose ) T.tryRemove( os.path.join(self.cwd, 'result.txt'), verbose=self.verbose ) T.tryRemove( self.f_pdb[:-4]+'_residue.txt', verbose=self.verbose)
def cleanup( self ): """ Tidy up the mess you created. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_pdb ) T.tryRemove( self.f_relativeASA ) T.tryRemove( self.f_residueASA ) T.tryRemove('FOR???.DAT', wildcard=1) T.tryRemove('pdbout.tex') T.tryRemove('pdbout.txt') T.tryRemove('TEXSTORE.DAT') T.tryRemove('TEXTABLE.DAT')
def cleanup(self): """ Tidy up the mess you created. """ Executor.cleanup(self) if not self.debug: T.tryRemove(self.f_pdb) T.tryRemove(self.f_relativeASA) T.tryRemove(self.f_residueASA) T.tryRemove('FOR???.DAT', wildcard=1) T.tryRemove('pdbout.tex') T.tryRemove('pdbout.txt') T.tryRemove('TEXSTORE.DAT') T.tryRemove('TEXTABLE.DAT')
def cleanup( self ): """ Remove files created for and by the calculation. """ Executor.cleanup( self ) if not self.debug: T.tryRemove( self.temp_pdb ) T.tryRemove( self.temp_command ) T.tryRemove( self.temp_option ) T.tryRemove( self.temp_result ) T.tryRemove( self.temp_runlog ) T.tryRemove( self.temp_errlog ) ## Fold-X writes a file called "runlog.txt" ## to local directory. Try to remove it. T.tryRemove( 'runlog.txt' ) ## and even though the error log is supposed ## to be written to self.temp_errlog, I get a ## 'errorfile.txt' in the local directory. Remove. T.tryRemove( 'errorfile.txt' )
def cleanup(self): if not self.debug: T.tryRemove(self.foutName) self.deletePdbs() Executor.cleanup(self)
def cleanup( self ): Executor.cleanup( self ) if not self.debug: T.tryRemove( self.f_pdb )