Esempio n. 1
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def convertGTFToBed12(infile, outfile):
    """
    Transform the lncrna_final.gtf.gz into lncrna_final.bed
    """
    PipelineLncRNA.gtfToBed12(infile, outfile, "transcript")
Esempio n. 2
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def convertControlGTFToBed12(infile, outfile):
    """
    Convert either ensembl lincRNA, or control gtf to bed12 format
    """
    PipelineLncRNA.gtfToBed12(infile, outfile, "transcript")
Esempio n. 3
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def convertControlGTFToBed12(infile, outfile):
    """
    Convert either ensembl lincRNA, or control gtf to bed12 format
    """
    PipelineLncRNA.gtfToBed12(infile, outfile, "transcript")
Esempio n. 4
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def convertGTFToBed12(infile, outfile):
    """
    Transform the lncrna_final.gtf.gz into lncrna_final.bed
    """
    PipelineLncRNA.gtfToBed12(infile, outfile, "transcript")