Esempi in Python per getOptions

Esempio n. 1

File: NGSPipeline.py Progetto: bjpop/ngs-pipeline

def main():
    options = getOptions()
    outputDir = options['dir']
    mkOutputDir(outputDir)
    initLogger(options['logging'])
    control = options['control']
    if control == 'sequential':
        sequential(options)
    elif control == 'parallel':
        parallel(options)

Esempio n. 2

File: NGSPipeline.py Progetto: boratonAJ/ngs-pipeline

def main():
    options = getOptions()
    outputDir = options['dir']
    mkOutputDir(outputDir)
    initLogger(options['logging'])
    control = options['control']
    if control == 'sequential':
        sequential(options)
    elif control == 'parallel':
        parallel(options)

Esempio n. 3

File: ReferenceDatabase.py Progetto: bjpop/ngs-pipeline

def main():
    options = getOptions()
    initLogger(options['logging'])
    referenceDatabase(options)

Esempio n. 4

File: ReferenceDatabase.py Progetto: boratonAJ/ngs-pipeline

def main():
    options = getOptions()
    initLogger(options['logging'])
    referenceDatabase(options)