def attribute(
self,
inputs: TensorOrTupleOfTensorsGeneric,
neuron_selector: Union[int, Tuple[Union[int, slice], ...], Callable],
baselines: BaselineType = None,
additional_forward_args: Any = None,
attribute_to_neuron_input: bool = False,
custom_attribution_func: Union[None, Callable[..., Tuple[Tensor, ...]]] = None,
) -> TensorOrTupleOfTensorsGeneric:
r"""
Args:
inputs (tensor or tuple of tensors): Input for which layer
attributions are computed. If forward_func takes a
single tensor as input, a single input tensor should be
provided. If forward_func takes multiple tensors as input,
a tuple of the input tensors should be provided. It is
assumed that for all given input tensors, dimension 0
corresponds to the number of examples (aka batch size),
and if multiple input tensors are provided, the examples
must be aligned appropriately.
neuron_selector (int, callable, or tuple of ints or slices):
Selector for neuron
in given layer for which attribution is desired.
Neuron selector can be provided as:
- a single integer, if the layer output is 2D. This integer
selects the appropriate neuron column in the layer input
or output
- a tuple of integers or slice objects. Length of this
tuple must be one less than the number of dimensions
in the input / output of the given layer (since
dimension 0 corresponds to number of examples).
The elements of the tuple can be either integers or
slice objects (slice object allows indexing a
range of neurons rather individual ones).
If any of the tuple elements is a slice object, the
indexed output tensor is used for attribution. Note
that specifying a slice of a tensor would amount to
computing the attribution of the sum of the specified
neurons, and not the individual neurons independantly.
- a callable, which should
take the target layer as input (single tensor or tuple
if multiple tensors are in layer) and return a neuron or
aggregate of the layer's neurons for attribution.
For example, this function could return the
sum of the neurons in the layer or sum of neurons with
activations in a particular range. It is expected that
this function returns either a tensor with one element
or a 1D tensor with length equal to batch_size (one scalar
per input example)
baselines (scalar, tensor, tuple of scalars or tensors, optional):
Baselines define reference samples that are compared with
the inputs. In order to assign attribution scores DeepLift
computes the differences between the inputs/outputs and
corresponding references.
Baselines can be provided as:
- a single tensor, if inputs is a single tensor, with
exactly the same dimensions as inputs or the first
dimension is one and the remaining dimensions match
with inputs.
- a single scalar, if inputs is a single tensor, which will
be broadcasted for each input value in input tensor.
- a tuple of tensors or scalars, the baseline corresponding
to each tensor in the inputs' tuple can be:
- either a tensor with matching dimensions to
corresponding tensor in the inputs' tuple
or the first dimension is one and the remaining
dimensions match with the corresponding
input tensor.
- or a scalar, corresponding to a tensor in the
inputs' tuple. This scalar value is broadcasted
for corresponding input tensor.
In the cases when `baselines` is not provided, we internally
use zero scalar corresponding to each input tensor.
Default: None
additional_forward_args (any, optional): If the forward function
requires additional arguments other than the inputs for
which attributions should not be computed, this argument
can be provided. It must be either a single additional
argument of a Tensor or arbitrary (non-tuple) type or a tuple
containing multiple additional arguments including tensors
or any arbitrary python types. These arguments are provided
to forward_func in order, following the arguments in inputs.
Note that attributions are not computed with respect
to these arguments.
Default: None
attribute_to_neuron_input (bool, optional): Indicates whether to
compute the attributions with respect to the neuron input
or output. If `attribute_to_neuron_input` is set to True
then the attributions will be computed with respect to
neuron's inputs, otherwise it will be computed with respect
to neuron's outputs.
Note that currently it is assumed that either the input
or the output of internal neuron, depending on whether we
attribute to the input or output, is a single tensor.
Support for multiple tensors will be added later.
Default: False
custom_attribution_func (callable, optional): A custom function for
computing final attribution scores. This function can take
at least one and at most three arguments with the
following signature:
- custom_attribution_func(multipliers)
- custom_attribution_func(multipliers, inputs)
- custom_attribution_func(multipliers, inputs, baselines)
In case this function is not provided, we use the default
logic defined as: multipliers * (inputs - baselines)
It is assumed that all input arguments, `multipliers`,
`inputs` and `baselines` are provided in tuples of same
length. `custom_attribution_func` returns a tuple of
attribution tensors that have the same length as the
`inputs`.
Default: None
Returns:
**attributions** or 2-element tuple of **attributions**, **delta**:
- **attributions** (*tensor* or tuple of *tensors*):
Computes attributions using Deeplift's rescale rule for
particular neuron with respect to each input feature.
Attributions will always be the same size as the provided
inputs, with each value providing the attribution of the
corresponding input index.
If a single tensor is provided as inputs, a single tensor is
returned. If a tuple is provided for inputs, a tuple of
corresponding sized tensors is returned.
Examples::
>>> # ImageClassifier takes a single input tensor of images Nx3x32x32,
>>> # and returns an Nx10 tensor of class probabilities.
>>> net = ImageClassifier()
>>> # creates an instance of LayerDeepLift to interpret target
>>> # class 1 with respect to conv4 layer.
>>> dl = NeuronDeepLift(net, net.conv4)
>>> input = torch.randn(1, 3, 32, 32, requires_grad=True)
>>> # Computes deeplift attribution scores for conv4 layer and neuron
>>> # index (4,1,2).
>>> attribution = dl.attribute(input, (4,1,2))
"""
dl = DeepLift(cast(Module, self.forward_func), self.multiplies_by_inputs)
dl.gradient_func = construct_neuron_grad_fn(
self.layer,
neuron_selector,
attribute_to_neuron_input=attribute_to_neuron_input,
)
# NOTE: using __wrapped__ to not log
return dl.attribute.__wrapped__( # type: ignore
dl, # self
inputs,
baselines,
additional_forward_args=additional_forward_args,
custom_attribution_func=custom_attribution_func,
)
def attribute(
self,
inputs: TensorOrTupleOfTensorsGeneric,
neuron_selector: Union[int, Tuple[Union[int, slice], ...], Callable],
additional_forward_args: Any = None,
attribute_to_neuron_input: bool = False,
) -> TensorOrTupleOfTensorsGeneric:
r"""
Args:
inputs (tensor or tuple of tensors): Input for which
attributions are computed. If forward_func takes a single
tensor as input, a single input tensor should be provided.
If forward_func takes multiple tensors as input, a tuple
of the input tensors should be provided. It is assumed
that for all given input tensors, dimension 0 corresponds
to the number of examples (aka batch size), and if
multiple input tensors are provided, the examples must
be aligned appropriately.
neuron_selector (int, callable, or tuple of ints or slices):
Selector for neuron
in given layer for which attribution is desired.
Neuron selector can be provided as:
- a single integer, if the layer output is 2D. This integer
selects the appropriate neuron column in the layer input
or output
- a tuple of integers or slice objects. Length of this
tuple must be one less than the number of dimensions
in the input / output of the given layer (since
dimension 0 corresponds to number of examples).
The elements of the tuple can be either integers or
slice objects (slice object allows indexing a
range of neurons rather individual ones).
If any of the tuple elements is a slice object, the
indexed output tensor is used for attribution. Note
that specifying a slice of a tensor would amount to
computing the attribution of the sum of the specified
neurons, and not the individual neurons independantly.
- a callable, which should
take the target layer as input (single tensor or tuple
if multiple tensors are in layer) and return a neuron or
aggregate of the layer's neurons for attribution.
For example, this function could return the
sum of the neurons in the layer or sum of neurons with
activations in a particular range. It is expected that
this function returns either a tensor with one element
or a 1D tensor with length equal to batch_size (one scalar
per input example)
additional_forward_args (any, optional): If the forward function
requires additional arguments other than the inputs for
which attributions should not be computed, this argument
can be provided. It must be either a single additional
argument of a Tensor or arbitrary (non-tuple) type or a tuple
containing multiple additional arguments including tensors
or any arbitrary python types. These arguments are provided to
forward_func in order, following the arguments in inputs.
Note that attributions are not computed with respect
to these arguments.
Default: None
attribute_to_neuron_input (bool, optional): Indicates whether to
compute the attributions with respect to the neuron input
or output. If `attribute_to_neuron_input` is set to True
then the attributions will be computed with respect to
neuron's inputs, otherwise it will be computed with respect
to neuron's outputs.
Note that currently it is assumed that either the input
or the output of internal neuron, depending on whether we
attribute to the input or output, is a single tensor.
Support for multiple tensors will be added later.
Default: False
Returns:
*tensor* or tuple of *tensors* of **attributions**:
- **attributions** (*tensor* or tuple of *tensors*):
Deconvolution attribution of
particular neuron with respect to each input feature.
Attributions will always be the same size as the provided
inputs, with each value providing the attribution of the
corresponding input index.
If a single tensor is provided as inputs, a single tensor is
returned. If a tuple is provided for inputs, a tuple of
corresponding sized tensors is returned.
Examples::
>>> # ImageClassifier takes a single input tensor of images Nx3x32x32,
>>> # and returns an Nx10 tensor of class probabilities.
>>> # It contains an attribute conv1, which is an instance of nn.conv2d,
>>> # and the output of this layer has dimensions Nx12x32x32.
>>> net = ImageClassifier()
>>> neuron_deconv = NeuronDeconvolution(net, net.conv1)
>>> input = torch.randn(2, 3, 32, 32, requires_grad=True)
>>> # To compute neuron attribution, we need to provide the neuron
>>> # index for which attribution is desired. Since the layer output
>>> # is Nx12x32x32, we need a tuple in the form (0..11,0..31,0..31)
>>> # which indexes a particular neuron in the layer output.
>>> # For this example, we choose the index (4,1,2).
>>> # Computes neuron deconvolution for neuron with
>>> # index (4,1,2).
>>> attribution = neuron_deconv.attribute(input, (4,1,2))
"""
self.deconv.gradient_func = construct_neuron_grad_fn(
self.layer, neuron_selector, self.device_ids,
attribute_to_neuron_input)
# NOTE: using __wrapped__ to not log
return self.deconv.attribute.__wrapped__(self.deconv, inputs, None,
additional_forward_args)
def attribute(
self,
inputs: TensorOrTupleOfTensorsGeneric,
neuron_selector: Union[int, Tuple[Union[int, slice], ...], Callable],
baselines: Union[TensorOrTupleOfTensorsGeneric,
Callable[..., TensorOrTupleOfTensorsGeneric]],
n_samples: int = 5,
stdevs: float = 0.0,
additional_forward_args: Any = None,
attribute_to_neuron_input: bool = False,
) -> TensorOrTupleOfTensorsGeneric:
r"""
Args:
inputs (tensor or tuple of tensors): Input for which SHAP attribution
values are computed. If `forward_func` takes a single
tensor as input, a single input tensor should be provided.
If `forward_func` takes multiple tensors as input, a tuple
of the input tensors should be provided. It is assumed
that for all given input tensors, dimension 0 corresponds
to the number of examples, and if multiple input tensors
are provided, the examples must be aligned appropriately.
neuron_selector (int, callable, or tuple of ints or slices):
Selector for neuron
in given layer for which attribution is desired.
Neuron selector can be provided as:
- a single integer, if the layer output is 2D. This integer
selects the appropriate neuron column in the layer input
or output
- a tuple of integers or slice objects. Length of this
tuple must be one less than the number of dimensions
in the input / output of the given layer (since
dimension 0 corresponds to number of examples).
The elements of the tuple can be either integers or
slice objects (slice object allows indexing a
range of neurons rather individual ones).
If any of the tuple elements is a slice object, the
indexed output tensor is used for attribution. Note
that specifying a slice of a tensor would amount to
computing the attribution of the sum of the specified
neurons, and not the individual neurons independantly.
- a callable, which should
take the target layer as input (single tensor or tuple
if multiple tensors are in layer) and return a neuron or
aggregate of the layer's neurons for attribution.
For example, this function could return the
sum of the neurons in the layer or sum of neurons with
activations in a particular range. It is expected that
this function returns either a tensor with one element
or a 1D tensor with length equal to batch_size (one scalar
per input example)
baselines (tensor, tuple of tensors, callable):
Baselines define the starting point from which expectation
is computed and can be provided as:
- a single tensor, if inputs is a single tensor, with
the first dimension equal to the number of examples
in the baselines' distribution. The remaining dimensions
must match with input tensor's dimension starting from
the second dimension.
- a tuple of tensors, if inputs is a tuple of tensors,
with the first dimension of any tensor inside the tuple
equal to the number of examples in the baseline's
distribution. The remaining dimensions must match
the dimensions of the corresponding input tensor
starting from the second dimension.
- callable function, optionally takes `inputs` as an
argument and either returns a single tensor
or a tuple of those.
It is recommended that the number of samples in the baselines'
tensors is larger than one.
n_samples (int, optional): The number of randomly generated examples
per sample in the input batch. Random examples are
generated by adding gaussian random noise to each sample.
Default: `5` if `n_samples` is not provided.
stdevs (float, or a tuple of floats optional): The standard deviation
of gaussian noise with zero mean that is added to each
input in the batch. If `stdevs` is a single float value
then that same value is used for all inputs. If it is
a tuple, then it must have the same length as the inputs
tuple. In this case, each stdev value in the stdevs tuple
corresponds to the input with the same index in the inputs
tuple.
Default: 0.0
additional_forward_args (any, optional): If the forward function
requires additional arguments other than the inputs for
which attributions should not be computed, this argument
can be provided. It can contain a tuple of ND tensors or
any arbitrary python type of any shape.
In case of the ND tensor the first dimension of the
tensor must correspond to the batch size. It will be
repeated for each `n_steps` for each randomly generated
input sample.
Note that the gradients are not computed with respect
to these arguments.
Default: None
attribute_to_neuron_input (bool, optional): Indicates whether to
compute the attributions with respect to the neuron input
or output. If `attribute_to_neuron_input` is set to True
then the attributions will be computed with respect to
neuron's inputs, otherwise it will be computed with respect
to neuron's outputs.
Note that currently it is assumed that either the input
or the output of internal neuron, depending on whether we
attribute to the input or output, is a single tensor.
Support for multiple tensors will be added later.
Default: False
Returns:
**attributions** or 2-element tuple of **attributions**, **delta**:
- **attributions** (*tensor* or tuple of *tensors*):
Attribution score computed based on GradientSHAP with respect
to each input feature. Attributions will always be
the same size as the provided inputs, with each value
providing the attribution of the corresponding input index.
If a single tensor is provided as inputs, a single tensor is
returned. If a tuple is provided for inputs, a tuple of
corresponding sized tensors is returned.
Examples::
>>> # ImageClassifier takes a single input tensor of images Nx3x32x32,
>>> # and returns an Nx10 tensor of class probabilities.
>>> net = ImageClassifier()
>>> neuron_grad_shap = NeuronGradientShap(net, net.linear2)
>>> input = torch.randn(3, 3, 32, 32, requires_grad=True)
>>> # choosing baselines randomly
>>> baselines = torch.randn(20, 3, 32, 32)
>>> # Computes gradient SHAP of first neuron in linear2 layer
>>> # with respect to the input's of the network.
>>> # Attribution size matches input size: 3x3x32x32
>>> attribution = neuron_grad_shap.attribute(input, neuron_ind=0
baselines)
"""
gs = GradientShap(self.forward_func, self.multiplies_by_inputs)
gs.gradient_func = construct_neuron_grad_fn(
self.layer,
neuron_selector,
self.device_ids,
attribute_to_neuron_input=attribute_to_neuron_input,
)
# NOTE: using __wrapped__ to not log
return gs.attribute.__wrapped__( # type: ignore
gs, # self
inputs,
baselines,
n_samples=n_samples,
stdevs=stdevs,
additional_forward_args=additional_forward_args,
)
def attribute(
self,
inputs: TensorOrTupleOfTensorsGeneric,
neuron_selector: Union[int, Tuple[Union[int, slice], ...], Callable],
baselines: Union[None, Tensor, Tuple[Tensor, ...]] = None,
additional_forward_args: Any = None,
n_steps: int = 50,
method: str = "gausslegendre",
internal_batch_size: Union[None, int] = None,
attribute_to_neuron_input: bool = False,
) -> TensorOrTupleOfTensorsGeneric:
r"""
Args:
inputs (tensor or tuple of tensors): Input for which neuron integrated
gradients are computed. If forward_func takes a single
tensor as input, a single input tensor should be provided.
If forward_func takes multiple tensors as input, a tuple
of the input tensors should be provided. It is assumed
that for all given input tensors, dimension 0 corresponds
to the number of examples, and if multiple input tensors
are provided, the examples must be aligned appropriately.
neuron_selector (int, callable, or tuple of ints or slices):
Selector for neuron
in given layer for which attribution is desired.
Neuron selector can be provided as:
- a single integer, if the layer output is 2D. This integer
selects the appropriate neuron column in the layer input
or output
- a tuple of integers or slice objects. Length of this
tuple must be one less than the number of dimensions
in the input / output of the given layer (since
dimension 0 corresponds to number of examples).
The elements of the tuple can be either integers or
slice objects (slice object allows indexing a
range of neurons rather individual ones).
If any of the tuple elements is a slice object, the
indexed output tensor is used for attribution. Note
that specifying a slice of a tensor would amount to
computing the attribution of the sum of the specified
neurons, and not the individual neurons independantly.
- a callable, which should
take the target layer as input (single tensor or tuple
if multiple tensors are in layer) and return a neuron or
aggregate of the layer's neurons for attribution.
For example, this function could return the
sum of the neurons in the layer or sum of neurons with
activations in a particular range. It is expected that
this function returns either a tensor with one element
or a 1D tensor with length equal to batch_size (one scalar
per input example)
baselines (scalar, tensor, tuple of scalars or tensors, optional):
Baselines define the starting point from which integral
is computed.
Baselines can be provided as:
- a single tensor, if inputs is a single tensor, with
exactly the same dimensions as inputs or the first
dimension is one and the remaining dimensions match
with inputs.
- a single scalar, if inputs is a single tensor, which will
be broadcasted for each input value in input tensor.
- a tuple of tensors or scalars, the baseline corresponding
to each tensor in the inputs' tuple can be:
- either a tensor with matching dimensions to
corresponding tensor in the inputs' tuple
or the first dimension is one and the remaining
dimensions match with the corresponding
input tensor.
- or a scalar, corresponding to a tensor in the
inputs' tuple. This scalar value is broadcasted
for corresponding input tensor.
In the cases when `baselines` is not provided, we internally
use zero scalar corresponding to each input tensor.
Default: None
additional_forward_args (any, optional): If the forward function
requires additional arguments other than the inputs for
which attributions should not be computed, this argument
can be provided. It must be either a single additional
argument of a Tensor or arbitrary (non-tuple) type or a
tuple containing multiple additional arguments including
tensors or any arbitrary python types. These arguments
are provided to forward_func in order following the
arguments in inputs.
For a tensor, the first dimension of the tensor must
correspond to the number of examples. It will be
repeated for each of `n_steps` along the integrated
path. For all other types, the given argument is used
for all forward evaluations.
Note that attributions are not computed with respect
to these arguments.
Default: None
n_steps (int, optional): The number of steps used by the approximation
method. Default: 50.
method (string, optional): Method for approximating the integral,
one of `riemann_right`, `riemann_left`, `riemann_middle`,
`riemann_trapezoid` or `gausslegendre`.
Default: `gausslegendre` if no method is provided.
internal_batch_size (int, optional): Divides total #steps * #examples
data points into chunks of size at most internal_batch_size,
which are computed (forward / backward passes)
sequentially. internal_batch_size must be at least equal to
#examples.
For DataParallel models, each batch is split among the
available devices, so evaluations on each available
device contain internal_batch_size / num_devices examples.
If internal_batch_size is None, then all evaluations are
processed in one batch.
Default: None
attribute_to_neuron_input (bool, optional): Indicates whether to
compute the attributions with respect to the neuron input
or output. If `attribute_to_neuron_input` is set to True
then the attributions will be computed with respect to
neuron's inputs, otherwise it will be computed with respect
to neuron's outputs.
Note that currently it is assumed that either the input
or the output of internal neuron, depending on whether we
attribute to the input or output, is a single tensor.
Support for multiple tensors will be added later.
Default: False
Returns:
*tensor* or tuple of *tensors* of **attributions**:
- **attributions** (*tensor* or tuple of *tensors*):
Integrated gradients for particular neuron with
respect to each input feature.
Attributions will always be the same size as the provided
inputs, with each value providing the attribution of the
corresponding input index.
If a single tensor is provided as inputs, a single tensor is
returned. If a tuple is provided for inputs, a tuple of
corresponding sized tensors is returned.
Examples::
>>> # ImageClassifier takes a single input tensor of images Nx3x32x32,
>>> # and returns an Nx10 tensor of class probabilities.
>>> # It contains an attribute conv1, which is an instance of nn.conv2d,
>>> # and the output of this layer has dimensions Nx12x32x32.
>>> net = ImageClassifier()
>>> neuron_ig = NeuronIntegratedGradients(net, net.conv1)
>>> input = torch.randn(2, 3, 32, 32, requires_grad=True)
>>> # To compute neuron attribution, we need to provide the neuron
>>> # index for which attribution is desired. Since the layer output
>>> # is Nx12x32x32, we need a tuple in the form (0..11,0..31,0..31)
>>> # which indexes a particular neuron in the layer output.
>>> # For this example, we choose the index (4,1,2).
>>> # Computes neuron integrated gradients for neuron with
>>> # index (4,1,2).
>>> attribution = neuron_ig.attribute(input, (4,1,2))
"""
ig = IntegratedGradients(self.forward_func, self.multiplies_by_inputs)
ig.gradient_func = construct_neuron_grad_fn(self.layer,
neuron_selector,
self.device_ids,
attribute_to_neuron_input)
# NOTE: using __wrapped__ to not log
# Return only attributions and not delta
return ig.attribute.__wrapped__( # type: ignore
ig, # self
inputs,
baselines,
additional_forward_args=additional_forward_args,
n_steps=n_steps,
method=method,
internal_batch_size=internal_batch_size,
)
