def test_parse_blast_fits_empty_file(self):
"""Parses empty file correctly"""
gene_detector = GeneDetector('madansi/tests/data/empty_file.fa',
'madansi/tests/data/empty_file')
self.assertEqual(gene_detector.parse_blast_hits(), [])
def test_parse_blast_fits_empty_file(self):
"""Parses empty file correctly"""
gene_detector= GeneDetector('madansi/tests/data/empty_file.fa', 'madansi/tests/data/empty_file')
self.assertEqual(gene_detector.parse_blast_hits(), [])
def test_parse_blast_hits_one(self):
"""Tests that the correct type of object is obtained from parsing one blast hit"""
gene_detector = GeneDetector('madansi/tests/data/assembly.fa',
'madansi/tests/data/one_blast_hit')
self.assertTrue(
isinstance(gene_detector.parse_blast_hits()[0], BlastHit))
def test_parse_blast_hits_one(self):
"""Tests that the correct type of object is obtained from parsing one blast hit"""
gene_detector = GeneDetector('madansi/tests/data/assembly.fa', 'madansi/tests/data/one_blast_hit')
self.assertTrue(isinstance(gene_detector.parse_blast_hits()[0], BlastHit))