def setUp(self):
self.db_fa = _get_data_dir()('db.faa')
self.db = _get_data_dir()('db.dmnd')
self.temp_dir = mkdtemp()
self.neg_fp = map(
get_data_path,
['empty', 'whitespace_only'])
def setUp(self):
super().setUp()
tests = [('blastp', 'WP_009885814.faa'),
('blastx', 'WP_009885814.fna')]
self.blast = [
(i[0],
get_data_path(i[1]),
_get_data_dir()('%s.diamond' % i[1]))
for i in tests]
def setUp(self):
self.obs_db_fp = mktemp()
self.exp_db_fp = _get_data_dir()('tigrfam.db')
self.d = dirname(self.exp_db_fp)