def test_point_to_section_end():
cell = tested.get_NRN_cell(SIMPLE)
assert (tested.point_to_section_end(cell.icell.all, [-8, 10, 0]) == 6)
assert (tested.point_to_section_end(cell.icell.all, [-8, 10, 2]) == None)
assert (tested.point_to_section_end(cell.icell.all, [-8, 10, 2],
atol=10) == 3)
def test_point_to_section_end():
cell = tested.get_NRN_cell(SIMPLE)
assert_equal(tested.point_to_section_end(cell.icell.all, [-8, 10, 0]),
6)
assert_equal(tested.point_to_section_end(cell.icell.all, [-8, 10, 2]),
None)
assert_equal(tested.point_to_section_end(cell.icell.all, [-8, 10, 2],
atol=10),
3)
def _to_be_isolated(morphology_path, point):
"""Convert a point position to NEURON section index and return cell name and id.
Args:
morphology_path (Path): path to morphology
point (list/ndarray): 3d point
"""
cell = tested.get_NRN_cell(morphology_path)
return tested.point_to_section_end(cell.icell.all, point)