letter="c")
definition.add_optional("parallel",
"integer_tuple",
"the parallelization scheme (processes, threads)",
letter="p",
default=(8, 4))
definition.add_optional(
"walltime",
"duration",
"an estimate for the walltime of the simulation for the specified parallelization scheme",
"12:00:00",
convert_default=True)
definition.add_flag("data_parallel", "enable data parallelization", None)
# Logging options
definition.import_section_from_composite_class("logging", "logging options",
LoggingOptions)
# Create the configuration
config = parse_arguments("installation_commands", definition)
# -----------------------------------------------------------------
host = load_host(config.remote, config.cluster)
modules = []
modules.append("iimpi/2016b")
ski_path = config.ski
output_path = config.output
input_path = config.input
definition = SingleSimulationDefinition(ski_path, output_path, input_path)
# Other
definition.add_flag("keep", "keep remote input and output")
definition.add_optional(
"retrieve_types",
"string_list",
"types of output files that have to be retrieved/retained (None means everything)",
choices=output_type_choices)
# Special things
definition.add_flag("dry", "dry run (don't actually launch the simulations)",
False)
definition.add_flag(
"attached",
"launch the simulations in attached mode (only works if remotes without scheduling system are used)"
)
# Logging options
definition.import_section_from_composite_class("logging", "logging options",
LoggingOptions)
# Analysis options
definition.import_section_from_composite_class("analysis",
"simulation analysis options",
AnalysisOptions)
# NEW: show the output of finished simulations
definition.add_flag("show", "show the output of finished simulations", False)
# -----------------------------------------------------------------
# Various flags
definition.add_flag("relative", "treats the given input and output paths as being relative to the ski/fski file")
definition.add_flag("emulate", "emulate the simulation while limiting computation")
# Other
definition.add_flag("keep", "keep remote input and output")
definition.add_flag("keep_input", "keep remote input specifically")
definition.add_optional("retrieve_types", "string_list", "types of output files that have to be retrieved/retained (None means everything)", choices=output_type_choices)
# Special things
definition.add_flag("dry", "dry run (don't actually launch the simulations)", False)
definition.add_flag("attached", "launch the simulations in attached mode (only works if remotes without scheduling system are used)")
# Logging options
definition.import_section_from_composite_class("logging", "logging options", LoggingOptions)
# Analysis options
definition.import_section_from_composite_class("analysis", "simulation analysis options", AnalysisOptions)
# Show stuff
definition.add_flag("show", "show", True)
# Show the output of finished simulations
definition.add_flag("show_finished", "show the output of finished simulations", False)
# -----------------------------------------------------------------
# Retrieve and analyse finished simulations?
definition.add_flag("retrieve", "retrieve finished simulations", True)
definition.add_flag("analyse", "analyse retrieved simulations", True)
