from glue.ligolw import utils as ligolw_utils
from glue.ligolw.utils import segments as ligolw_segments
from glue.ligolw.utils import process as ligolw_process
from glue.segmentdb import segmentdb_utils
logging.basicConfig(format='%(asctime)s:%(levelname)s : %(message)s', \
level=logging.INFO,datefmt='%I:%M:%S')
# command line options
_desc = __doc__[1:]
parser = argparse.ArgumentParser(description=_desc)
parser.add_argument('--version', action='version', version=__version__)
parser.add_argument("-d", "--output-dir", required=True,\
help="Path to output directory.")
_workflow.add_workflow_command_line_group(parser)
args = parser.parse_args()
workflow = _workflow.Workflow(args)
currDir = os.path.abspath(args.output_dir)
segDir = os.path.join(currDir, "segments")
dfDir = os.path.join(currDir, "datafind")
print "BEGIN BY GENERATING SCIENCE AND CAT_X VETOES"
def segment_report(sSegs):
fullLen = 0
fullNum = 0
shortLen = 0
shortNum = 0
from glue.ligolw import utils as ligolw_utils
from glue.ligolw.utils import segments as ligolw_segments
from glue.ligolw.utils import process as ligolw_process
from glue.segmentdb import segmentdb_utils
logging.basicConfig(format='%(asctime)s:%(levelname)s : %(message)s', \
level=logging.INFO,datefmt='%I:%M:%S')
# command line options
_desc = __doc__[1:]
parser = argparse.ArgumentParser(description=_desc)
parser.add_argument('--version', action='version', version=__version__)
parser.add_argument("-d", "--output-dir", required=True,\
help="Path to output directory.")
_workflow.add_workflow_command_line_group(parser)
args = parser.parse_args()
workflow = _workflow.Workflow(args)
currDir = os.path.abspath(args.output_dir)
segDir = os.path.join(currDir,"segments")
dfDir = os.path.join(currDir,"datafind")
print "BEGIN BY GENERATING SCIENCE AND CAT_X VETOES"
def segment_report(sSegs):
fullLen = 0
fullNum = 0
shortLen = 0
shortNum = 0
longLen = 0
