Esempi in Python per writeSetOfCoordinates

Esempio n. 1

File: protocol_autopick_v2.py Progetto: delarosatrevin/scipion

 def _writeXmippCoords(self, coordSet):
     micSet = self.getInputMicrographs()
     coordPath = self._getTmpPath('xmipp_coordinates')
     pwutils.cleanPath(coordPath)
     pwutils.makePath(coordPath)
     import pyworkflow.em.packages.xmipp3 as xmipp3
     micPath = micSet.getFileName()
     xmipp3.writeSetOfCoordinates(coordPath, coordSet, ismanual=False)
     return micPath, coordPath

Esempio n. 2

File: protocol_autopick_v2.py Progetto: I2PC/scipion

 def _writeXmippCoords(self, coordSet):
     micSet = self.getInputMicrographs()
     coordPath = self._getTmpPath('xmipp_coordinates')
     pwutils.cleanPath(coordPath)
     pwutils.makePath(coordPath)
     import pyworkflow.em.packages.xmipp3 as xmipp3
     micPath = micSet.getFileName()
     xmipp3.writeSetOfCoordinates(coordPath, coordSet, ismanual=False)
     return micPath, coordPath

Esempio n. 3

File: protocol_autopick.py Progetto: denisfortun/scipion

 def _writeXmippCoords(self, coordSet):
     micSet = self.getInputMicrographs()
     coordPath = self._getTmpPath('xmipp_coordinates')
     pwutils.cleanPath(coordPath)
     pwutils.makePath(coordPath)
     import pyworkflow.em.packages.xmipp3 as xmipp3
     micPath = os.path.join(coordPath, 'micrographs.xmd')
     xmipp3.writeSetOfMicrographs(micSet, micPath)
     xmipp3.writeSetOfCoordinates(coordPath, coordSet)
     return micPath, coordPath