def test_update_status_field_value_when_one_subject_with_no_form(self):
self.source = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
</all_form_events>
</person>
</person_form_event>
"""
self.source_tree = etree.ElementTree(etree.fromstring(self.source))
self.input = """
<rediFieldMap>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>wbc_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>wbc_lborresu</redcapFieldNameUnits>
<redcapStatusFieldName>wbc_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>neut_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>neut_lborresu</redcapFieldNameUnits>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>inr</redcapFormName>
<redcapFieldNameValue>inr_lborres</redcapFieldNameValue>
<redcapStatusFieldName>inr_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
</rediFieldMap>
"""
self.input_tree = etree.ElementTree(etree.fromstring(self.input))
self.output = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
</all_form_events>
</person>
</person_form_event>
"""
self.expect = etree.tostring(etree.fromstring(self.output))
redi.updateStatusFieldValueInPersonFormEventTree(
self.source_tree, self.input_tree)
result = etree.tostring(self.source_tree)
self.assertEqual(self.expect, result)
def test_update_status_field_value_when_one_subject_with_no_form(self):
self.source = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
</all_form_events>
</person>
</person_form_event>
"""
self.source_tree = etree.ElementTree(etree.fromstring(self.source))
self.input = """
<rediFieldMap>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>wbc_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>wbc_lborresu</redcapFieldNameUnits>
<redcapStatusFieldName>wbc_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>neut_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>neut_lborresu</redcapFieldNameUnits>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>inr</redcapFormName>
<redcapFieldNameValue>inr_lborres</redcapFieldNameValue>
<redcapStatusFieldName>inr_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
</rediFieldMap>
"""
self.input_tree = etree.ElementTree(etree.fromstring(self.input))
self.output = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
</all_form_events>
</person>
</person_form_event>
"""
self.expect = etree.tostring(etree.fromstring(self.output))
redi.updateStatusFieldValueInPersonFormEventTree(self.source_tree, self.input_tree)
result = etree.tostring(self.source_tree)
self.assertEqual(self.expect, result)
def test_update_status_field_value_when_two_subjects_with_two_forms_with_one_event_in_each_form(
self):
self.source = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value>3.0</value>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value/>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value/>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value>2</value>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
</person_form_event>
"""
self.source_tree = etree.ElementTree(etree.fromstring(self.source))
self.input = """
<rediFieldMap>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>wbc_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>wbc_lborresu</redcapFieldNameUnits>
<redcapStatusFieldName>wbc_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>neut_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>neut_lborresu</redcapFieldNameUnits>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>inr</redcapFormName>
<redcapFieldNameValue>inr_lborres</redcapFieldNameValue>
<redcapStatusFieldName>inr_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
</rediFieldMap>
"""
self.input_tree = etree.ElementTree(etree.fromstring(self.input))
self.output = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value>3.0</value>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value/>
</field>
<field>
<name>inr_lbstat</name>
<value>NOT_DONE</value>
</field>
</event>
</form>
</all_form_events>
</person>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value/>
</field>
<field>
<name>wbc_lbstat</name>
<value>NOT_DONE</value>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value>2</value>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
</person_form_event>
"""
self.expect = etree.tostring(etree.fromstring(self.output))
redi.updateStatusFieldValueInPersonFormEventTree(
self.source_tree, self.input_tree)
result = etree.tostring(self.source_tree)
self.assertEqual(self.expect, result)
def test_update_status_field_value_when_two_subjects_with_two_forms_with_one_event_in_each_form(self):
self.source = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value>3.0</value>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value/>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value/>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value>2</value>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
</person_form_event>
"""
self.source_tree = etree.ElementTree(etree.fromstring(self.source))
self.input = """
<rediFieldMap>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>wbc_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>wbc_lborresu</redcapFieldNameUnits>
<redcapStatusFieldName>wbc_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>cbc</redcapFormName>
<redcapFieldNameValue>neut_lborres</redcapFieldNameValue>
<redcapFieldNameUnits>neut_lborresu</redcapFieldNameUnits>
</clinicalComponent>
<clinicalComponent>
<redcapFormName>inr</redcapFormName>
<redcapFieldNameValue>inr_lborres</redcapFieldNameValue>
<redcapStatusFieldName>inr_lbstat</redcapStatusFieldName>
<redcapStatusFieldValue>NOT_DONE</redcapStatusFieldValue>
</clinicalComponent>
</rediFieldMap>
"""
self.input_tree = etree.ElementTree(etree.fromstring(self.input))
self.output = """<person_form_event>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value>3.0</value>
</field>
<field>
<name>wbc_lbstat</name>
<value/>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value/>
</field>
<field>
<name>inr_lbstat</name>
<value>NOT_DONE</value>
</field>
</event>
</form>
</all_form_events>
</person>
<person>
<study_id>99</study_id>
<all_form_events>
<form>
<name>cbc</name>
<event>
<name>1_arm_1</name>
<field>
<name>cbc_lbdtc</name>
<value>1905-10-01</value>
</field>
<field>
<name>wbc_lborres</name>
<value/>
</field>
<field>
<name>wbc_lbstat</name>
<value>NOT_DONE</value>
</field>
<field>
<name>neut_lborres</name>
<value>500</value>
</field>
<field>
<name>neut_lbstat</name>
<value/>
</field>
</event>
</form>
<form>
<name>inr</name>
<event>
<name>1_arm_1</name>
<field>
<name>inr_lbdtc</name>
<value>1906-12-01</value>
</field>
<field>
<name>inr_lborres</name>
<value>2</value>
</field>
<field>
<name>inr_lbstat</name>
<value/>
</field>
</event>
</form>
</all_form_events>
</person>
</person_form_event>
"""
self.expect = etree.tostring(etree.fromstring(self.output))
redi.updateStatusFieldValueInPersonFormEventTree(self.source_tree, self.input_tree)
result = etree.tostring(self.source_tree)
self.assertEqual(self.expect, result)