def display(self,path):
import wx
from rstbx.viewer.frame import XrayFrame
app = wx.App(0)
frame = XrayFrame(None, -1, "X-ray image display", size=(1200,1080))
frame.SetSize((1024,780))
frame.load_image(path)
frame.Show()
app.MainLoop()
def display(self,path):
import wx
from rstbx.viewer.frame import XrayFrame
app = wx.App(0)
frame = XrayFrame(None, -1, "X-ray image display", size=(1200,1080))
frame.SetSize((1024,780))
frame.load_image(path)
frame.Show()
app.MainLoop()
def run (args) :
app = wx.App(0)
wx.SystemOptions.SetOptionInt("osx.openfiledialog.always-show-types", 1)
frame = XrayFrame(None, -1, "X-ray image display", size=(800,720))
if (len(args) == 1 and os.path.basename(args[0]) == "DISTL_pickle") :
assert os.path.isfile(args[0])
frame.load_distl_output(args[0])
elif (len(args) > 0) :
for file_name in args:
assert os.path.isfile(file_name)
frame.add_file_name_or_data(file_name)
frame.load_image(args[0])
frame.Show()
app.MainLoop()
def run(args):
app = wx.App(0)
wx.SystemOptions.SetOption("osx.openfiledialog.always-show-types", "1")
frame = XrayFrame(None, -1, "X-ray image display", size=(800,720))
if (len(args) == 1 and os.path.basename(args[0]) == "DISTL_pickle"):
assert os.path.isfile(args[0])
frame.load_distl_output(args[0])
elif (len(args) > 0):
for file_name in args:
assert os.path.isfile(file_name)
frame.add_file_name_or_data(file_name)
frame.load_image(args[0])
frame.Show()
app.MainLoop()
def run_one_index(path, *arguments, **kwargs):
assert arguments[0].find("target=") == 0
target = arguments[0].split("=")[1]
from xfel.phil_preferences import load_cxi_phil
if "--nodisplay" in arguments[1:]:
display = False
arguments = list(arguments)
arguments.remove("--nodisplay")
else:
display = True
args = [
"indexing.data=%s" % path,
"beam_search_scope=0.5",
"lepage_max_delta = 3.0",
"spots_pickle = None",
"subgroups_pickle = None",
"refinements_pickle = None",
"rmsd_tolerance = 5.0",
"mosflm_rmsd_tolerance = 5.0",
"difflimit_sigma_cutoff=2.0",
#"indexing.verbose_cv=True",
"indexing.open_wx_viewer=%s" % display
] + list(arguments[1:])
horizons_phil = load_cxi_phil(target, args)
info = run_one_index_core(horizons_phil)
info.Files = info.organizer.Files
info.phil_params = info.horizons_phil
# The spotfinder view within cxi.index is an anachronism; no useful purpose anymore
# therefore remove this option within cxi.index:
return
work = wrapper_of_callback(info)
if kwargs.get("display", False):
import wx
from rstbx.viewer import display
from rstbx.viewer.frame import XrayFrame
display.user_callback = work.user_callback
app = wx.App(0)
frame = XrayFrame(None, -1, "X-ray image display", size=(1200, 1080))
frame.SetSize((1024, 780))
frame.load_image(path)
frame.Show()
app.MainLoop()
def run_one_index(path, *arguments, **kwargs):
assert arguments[0].find("target=")==0
target = arguments[0].split("=")[1]
from xfel.phil_preferences import load_cxi_phil
if "--nodisplay" in arguments[1:]:
display = False
arguments = list(arguments)
arguments.remove("--nodisplay")
else:
display = True
args = ["indexing.data=%s"%path,
"beam_search_scope=0.5",
"lepage_max_delta = 3.0",
"spots_pickle = None",
"subgroups_pickle = None",
"refinements_pickle = None",
"rmsd_tolerance = 5.0",
"mosflm_rmsd_tolerance = 5.0",
"difflimit_sigma_cutoff=2.0",
#"indexing.verbose_cv=True",
"indexing.open_wx_viewer=%s"%display
] + list(arguments[1:])
horizons_phil = load_cxi_phil(target, args)
info = run_one_index_core(horizons_phil)
info.Files = info.organizer.Files
info.phil_params = info.horizons_phil
# The spotfinder view within cxi.index is an anachronism; no useful purpose anymore
# therefore remove this option within cxi.index:
return
work = wrapper_of_callback(info)
if kwargs.get("display",False):
import wx
from rstbx.viewer import display
from rstbx.viewer.frame import XrayFrame
display.user_callback = work.user_callback
app = wx.App(0)
frame = XrayFrame(None, -1, "X-ray image display", size=(1200,1080))
frame.SetSize((1024,780))
frame.load_image(path)
frame.Show()
app.MainLoop()
