sys.exit(1)
for study in patientStudy:
##########Fetch series#############
print("Fetching series for the studyInstanceUID: "+ study['StudyInstanceUID'])
try:
patientSeries = json.loads(tcia.get_series(studyInstanceUID=study['StudyInstanceUID']).text)
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
for series in patientSeries:
print("Fetching images for the seriesInstanceUID: "+series['SeriesInstanceUID'])
##################Fetch images#############
try:
images = (tcia.get_image(seriesInstanceUID=series['SeriesInstanceUID']))
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
#print(images)
print("Writing image zipfile for the seriesInstanceUID: "+series['SeriesInstanceUID'])
series_path = os.path.join(dicom_path,patient,study['StudyInstanceUID'],series['SeriesInstanceUID'])
try:
os.makedirs(series_path)
except:
pass
fileName = os.path.join(series_path,patient+".zip")
f = open(fileName, "wb")
patientStudyHash = buildHash("StudyInstanceUID", patientStudy)
patientStudy = processInput(patientStudyHash, "studyInstanceUID")
print("Fetching series for the studyInstanceUID: "+ patientStudy)
##########Fetch series#############3
try:
patientSeries = json.loads(tcia.get_series(studyInstanceUID=patientStudy).text)
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
patientSeriesHash = buildHash("SeriesInstanceUID", patientSeries)
patientSeries = processInput(patientSeriesHash, "seriesInstanceUID")
print("Fetching images for the seriesInstanceUID: "+patientSeries)
##################Fetch images#############
try:
images = (tcia.get_image(seriesInstanceUID=patientSeries))
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
#print(images)
fileName = str(input("Enter the filename to save: "))
f = open(fileName+".zip", "wb")
f.write(images.content)
f.close()
patientStudyHash = buildHash("StudyInstanceUID", patientStudy)
patientStudy = processInput(patientStudyHash, "studyInstanceUID")
print("Fetching series for the studyInstanceUID: "+ patientStudy)
##########Fetch series#############3
try:
patientSeries = json.loads(tcia.get_series(studyInstanceUID=patientStudy).text)
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
patientSeriesHash = buildHash("SeriesInstanceUID", patientSeries)
patientSeries = processInput(patientSeriesHash, "seriesInstanceUID")
print("Fetching images for the seriesInstanceUID: "+patientSeries)
##################Fetch images#############
try:
images = (tcia.get_image(seriesInstanceUID=patientSeries))
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
#print(images)
fileName = str(raw_input("Enter the filename to save: "))
f = open(fileName+".zip", "wb")
f.write(images.content)
f.close()
print("Fetching series for the studyInstanceUID: " +
study['StudyInstanceUID'])
try:
patientSeries = json.loads(
tcia.get_series(
studyInstanceUID=study['StudyInstanceUID']).text)
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
for series in patientSeries:
print("Fetching images for the seriesInstanceUID: " +
series['SeriesInstanceUID'])
##################Fetch images#############
try:
images = (tcia.get_image(
seriesInstanceUID=series['SeriesInstanceUID']))
except requests.exceptions.RequestException as e:
print(e)
sys.exit(1)
#print(images)
print("Writing image zipfile for the seriesInstanceUID: " +
series['SeriesInstanceUID'])
series_path = os.path.join(dicom_path, patient,
study['StudyInstanceUID'],
series['SeriesInstanceUID'])
try:
os.makedirs(series_path)
except:
pass
