def __init__(self, input_size, normalizer, isTraining):
single_input = Input(shape=[64, 64, 3])
encoder_inputs = Input(shape=input_size)
# create the encoderblocks:
x = single_input
for i in range(4):
x = enc_block_leaky(x, int(64 * 2**i), i + 1, normalizer, isTraining)
# bottleneck of the encoder:
x = Conv2D(512, 3, activation=None, padding='same', strides=1, name='encoder_conv5_1')(x)
x = normalize(x, 'encoder_norm5_1', normalizer, isTraining)
x = LeakyReLU()(x)
x = Conv2D(512, 3, activation=None, padding='same', strides=1, name='encoder_conv5_2')(x)
x = normalize(x, 'encoder_norm5_2', normalizer, isTraining)
enc_out = LeakyReLU(name='bottleneck_relu_layer')(x)
# create the encoder, which is the same for every snapshot
encoder_model = Model(inputs=single_input, outputs=enc_out)
# encode each snapshot individually through the same encoder (so weights are shared across the snapshots)
encoded_img_list = []
index = 1
for i in range(0, input_size[2], 3):
x = Lambda(lambda x: x[:, :, :, i:i + 3], name='img_{}'.format(str(index)))(encoder_inputs)
encoded_img_list.append(encoder_model(x))
index += 1
# concatenate the encodings
x = Concatenate(axis=3, name='conc_img_features')(encoded_img_list)
# global convolutions
for i in range(2):
x = Conv2D(int(2048 / 2 ** i), 3, activation=None, padding='same', strides=1,
name='{}_decoder_conv{}_{}'.format("conc_conv", index, i + 2))(x)
x = normalize(x, '{}_decoder_norm{}_{}'.format("conc_conv", index, i + 2), 'instance', True)
x = LeakyReLU()(x)
# decoder blocks
for i in range(5):
x = big_dec_block_leaky(x, int(1024 / 2 ** i), i + 1, normalizer, isTraining, "D2")
out = Conv2D(3, 3, activation='tanh', padding='same', name='final_conv')(x)
self.stitchdecoder = Model(inputs=encoder_inputs, outputs=out, name='stitcher')
self.stitchdecoder.summary()
# enable multi-gpu-processing
encoder_model = multi_gpu_model(encoder_model, gpus=2)
self.stitchdecoder = multi_gpu_model(self.stitchdecoder, gpus=2)
self.stitchdecoder.compile(optimizer=tf.keras.optimizers.Adam(lr=0.0001),
loss=vgg_loss, metrics=['accuracy', stitched_PSNR, stitched_ssim,
perceptual_stitched_loss, mae_loss])
def compile_model(self):
# init summary writer for tensorboard
self.callback1 = TensorBoard(self.log_dir + '/discriminator')
self.callback2 = TensorBoard(self.log_dir + '/generator')
self.callback3 = TensorBoard(self.log_dir + '/generated_images')
# model stuff
input_shape = [self.image_size, self.image_size, self.image_channels]
adam1 = Adam(lr=self.lr)
adam2 = Adam(lr=self.lr * 2)
# init and add multi-gpu support
try:
self.discriminator = multi_gpu_model(self.discriminator(),
gpus=self.gpu)
except:
self.discriminator = self.discriminator()
try:
self.generator = multi_gpu_model(self.generator(), gpus=self.gpu)
except:
self.generator = self.generator()
# compile discriminator
self.discriminator.compile(loss='binary_crossentropy', optimizer=adam1)
# compile generator
input_tensor = Input(shape=input_shape)
generated_catroon_tensor = self.generator(input_tensor)
self.discriminator.trainable = False # for here we only train the generator
discriminator_output = self.discriminator(generated_catroon_tensor)
self.train_generator = Model(
input_tensor,
outputs=[generated_catroon_tensor, discriminator_output])
# add multi-gpu support
try:
self.train_generator = multi_gpu_model(self.train_generator,
gpus=self.gpu)
except:
pass
self.train_generator.compile(
loss=[self.vgg_loss, 'binary_crossentropy'],
loss_weights=[float(self.weight), 1.0],
optimizer=adam2)
# set callback model
self.callback1.set_model(self.discriminator)
self.callback2.set_model(self.train_generator)
self.callback3.set_model(self.train_generator)
def _load_model(folder, model, weights_only=True):
latest = os.path.join(folder, "latest")
if model is None and weights_only:
with open(os.path.join(folder, 'model.yaml'), 'r') as yaml_file:
loaded_model_yaml = yaml_file.read()
model = model_from_yaml(loaded_model_yaml, custom_objects={'tf': tf})
print('Model loaded from %s' % os.path.join(folder, 'model.yaml'))
if os.path.isfile(latest):
with open(latest, 'r') as f:
filename = f.readlines()[0]
epoch = filename.split('_')[1]
# If model and weights were stored separately
if weights_only:
try:
model.load_weights(os.path.join(folder, '%s.h5' % filename))
except:
print('Single gpu loading failed, try with multi-gpu loading...')
from tensorflow.python.keras.utils import multi_gpu_model
multi_model = multi_gpu_model(model, gpus=len(os.environ["CUDA_VISIBLE_DEVICES"].split(',')) - 1)
multi_model.load_weights(os.path.join(folder, '%s.h5' % filename))
model = multi_model.layers[-2]
print('Weights loaded from %s' % os.path.join(folder, '%s.h5' % filename))
elif not weights_only:
model = load_model(os.path.join(folder, '%s.h5' % filename), compile=False)
print('Model loaded from %s' % os.path.join(folder, '%s.h5' % filename))
return model, int(epoch)
return model, 0
def generate(self, model_path):
num_anchors = len(self.anchors)
num_classes = len(self.class_names)
# self.yolo_model = load_model(model_path, compile=False)
self.yolo_model = yolo_body(
Input(shape=(None, None, self.num_channels)), num_anchors // 3,
num_classes)
self.yolo_model.load_weights(model_path)
hsv_tuples = [(x / len(self.class_names), 1., 1.)
for x in range(len(self.class_names))]
self.colors = list(map(lambda x: colorsys.hsv_to_rgb(*x), hsv_tuples))
self.colors = list(
map(lambda x: (int(x[0] * 255), int(x[1] * 255), int(x[2] * 255)),
self.colors))
np.random.seed(10101) # Fixed seed for consistent colors across runs.
np.random.shuffle(
self.colors) # Shuffle colors to decorrelate adjacent classes.
np.random.seed(None) # Reset seed to default.
# Generate output tensor targets for filtered bounding boxes.
self.input_image_shape = K.placeholder(shape=(2, ))
if self.gpu_num >= 2:
self.yolo_model = multi_gpu_model(self.yolo_model,
gpus=self.gpu_num)
boxes, scores, classes = yolo_eval(self.yolo_model.output,
self.anchors,
len(self.class_names),
self.input_image_shape,
score_threshold=self.score,
iou_threshold=self.iou)
return boxes, scores, classes
def toMultiGpuModel(model):
try:
gpu_model = multi_gpu_model(model)
return gpu_model
except:
print("gpu_model error")
return None
def model_placement(model, num_gpus):
"""
Function to place model on correct device based on number of GPUs.
Input:
- model: model to fit. Model class using Keras Functional API.
- num_gpus: Number of GPUs. 0 for CPU mode.
Returns:
- p_model: model placed on appropriate device.
"""
if num_gpus > 1:
from tensorflow.python.keras.utils import multi_gpu_model
with tf.device('/cpu:0'):
p_model = model
parallel_model = multi_gpu_model(p_model, gpus=num_gpus)
return parallel_model
elif num_gpus == 0:
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
os.environ["CUDA_VISIBLE_DEVICES"] = ""
p_model = model
return p_model
else:
with tf.device('/gpu:0'):
p_model = model
return p_model
def main(argv):
with set_session().as_default():
(X_train,
y_train), (X_val, y_val) = load_imdb(max_features=FLAGS.max_features,
maxlen=FLAGS.maxlen)
basemodel = BaseModel(input_dim=FLAGS.max_features,
maxlen=FLAGS.maxlen)
model = multi_gpu_model(basemodel.build(name=FLAGS.model_name),
gpus=len(get_available_gpus()))
model.compile(loss='binary_crossentropy',
optimizer=FLAGS.optimizer,
metrics=['accuracy'])
model.fit(
X_train.todense(),
y_train,
validation_data=(X_val.todense(), y_val),
batch_size=FLAGS.batch_size,
epochs=FLAGS.epochs,
callbacks=[
ModelCheckpointToGcs(
remotekey=FLAGS.gcs_path,
filename=
'model_checkpoint.{epoch:02d}_{loss:.6f}_{val_loss:.6f}.h5',
save_best_only=True),
CSVLoggerToGcs(remotekey=FLAGS.gcs_path,
filename=path.join('history_{}_{}.tsv').format(
FLAGS.model_name, FLAGS.optimizer),
separator='\t'),
])
def main():
os.makedirs(OPTS.models_dir, exist_ok=True)
with open(os.path.join(OPTS.input_dir, 'sequences.json'), 'r') as f:
sequences = json.loads(f.read())
with open(os.path.join(OPTS.input_dir, 'id2token.json'), 'rb') as f:
id2token = json.loads(f.read().decode('utf-8'))
with open(os.path.join(OPTS.models_dir, 'id2token.json'), 'wb') as fw:
f.seek(0)
fw.write(f.read())
print('lexicon:', len(id2token))
print('sequences:', len(sequences))
seq_min_len = min([len(seq) for seq in sequences])
print('seq_min_len:', seq_min_len)
seq_max_len = max([len(seq) for seq in sequences])
print('seq_max_len:', seq_max_len)
data_len = len(sequences) - len(sequences) % OPTS.batch_size
data = sequences[0:data_len]
data = pad_sequences(data, maxlen=seq_max_len, dtype='int32')
model = create_model(seq_len=data.shape[-1],
n_input_nodes=len(id2token),
n_embedding_nodes=OPTS.embedding_size,
n_hidden_nodes=OPTS.hidden_size,
batch_size=OPTS.batch_size,
stateful=False)
ckpt_file = os.path.join(OPTS.models_dir, 'ckpt.h5')
if os.path.exists(ckpt_file):
model = load_model(ckpt_file)
x = data
y = np.roll(x, -1, 1)
y = y[:, :, None]
print('available devices:')
print(device_lib.list_local_devices())
if OPTS.gpus > 1:
model = multi_gpu_model(model, OPTS.gpus)
save_step_callback = SaveStepCallback(
model, save_every_batch=OPTS.save_every_batch)
ckpt_callback = ModelCheckpoint(ckpt_file,
monitor='loss',
verbose=1,
save_best_only=True,
mode='min')
model.fit(x=x,
y=y,
epochs=OPTS.epochs,
initial_epoch=OPTS.initial_epoch,
batch_size=OPTS.batch_size,
callbacks=[save_step_callback, ckpt_callback],
shuffle=True)
model.save_weights(os.path.join(OPTS.models_dir, 'weights.h5'))
def add_predictor(self, side, model):
""" Add a predictor to the predictors dictionary """
logger.debug("Adding predictor: (side: '%s', model: %s)", side, model)
if self.gpus > 1:
logger.debug("Converting to multi-gpu: side %s", side)
model = multi_gpu_model(model, self.gpus)
self.predictors[side] = model
if not self.state.inputs:
self.store_input_shapes(model)
def __init__(self, input_size, norm='batch', isTraining=None):
"""
A convolutional autoencoder which is used with random crops of 64x64x3.
The bottleneck is 4x4x512 and leakyRelu is used all over the autoencoder.
"""
inputs = Input(shape=input_size, name='encoder_input')
x = inputs
# encoder part:
for i in range(4):
x = enc_block_leaky(x, int(64 * 2**i), i + 1, norm, isTraining)
# bottleneck:
x = Conv2D(512,
3,
activation=None,
padding='same',
strides=1,
name='encoder_conv5_1')(x)
x = normalize(x, 'encoder_norm5_1', norm, isTraining)
x = LeakyReLU()(x)
x = Conv2D(512,
3,
activation=None,
padding='same',
strides=1,
name='encoder_conv5_2')(x)
x = normalize(x, 'encoder_norm5_2', norm, isTraining)
enc_out = LeakyReLU(name='bottleneck_relu_layer')(x)
# decoder
x = enc_out
for i in range(4):
x = dec_block_leaky(x, int(256 / 2**i), i + 1, norm, isTraining,
"autoenc_v6")
# final layer
out = Conv2D(3,
3,
activation='tanh',
padding='same',
strides=1,
name='final_conv')(x)
self.autoencoder = Model(inputs=inputs,
outputs=out,
name='autoencoder')
self.autoencoder.summary()
self.autoencoder = multi_gpu_model(self.autoencoder, gpus=2)
self.autoencoder.compile(
optimizer=tf.keras.optimizers.Adam(lr=0.0001),
loss=vgg_loss,
metrics=['accuracy', PSNR, mae_loss, perceptual_loss])
def main(unused_argv):
if platform.system() == 'Windows':
print('Running on Windows')
base_dir = os.path.join('E:\\', 'Program', 'Bite')
save_path = os.path.join(base_dir, 'ckpt',
'weights-improvement-{epoch:02d}-{loss:.4f}-{acc:.2f}.hdf5')
elif platform.system() == 'Linux':
print('Running on Linux')
base_dir = os.path.join('/media', 'md0', 'xt1800i', 'Bite')
save_path = os.path.join(base_dir, 'ckpt',
'weights-improvement-{epoch:02d}-{loss:.4f}-{acc:.2f}.hdf5')
else:
print('Running on unsupported system')
return
tfrecord = os.path.join(base_dir, 'datasets', 'tfrecord', 'snake_all.tfrecord')
with tf.device('/cpu:0'):
model = keras_model()
training_set = tfdata_generator(filename=tfrecord, batch_size=FLAGS.batch_size, aug=True)
validation_set = tfdata_generator(filename=tfrecord, batch_size=FLAGS.batch_size)
if FLAGS.ckpt is not None:
print('loading weights')
model.load_weights(FLAGS.ckpt)
try:
parallel_model = multi_gpu_model(model, gpus=2)
print('Training on multiple GPUs')
except:
parallel_model = model
print('Training on single GPU')
global_step = tf.Variable(0, trainable=False)
learning_rate = tf.train.exponential_decay(learning_rate=0.001, global_step=global_step,
staircase=True, decay_steps=int(18288 / FLAGS.batch_size), decay_rate=0.96)
# learning_rate = tf.keras.optimizers.
optimizer = tf.train.AdamOptimizer(learning_rate=learning_rate)
print(model.summary())
parallel_model.compile(optimizer=optimizer, loss='categorical_crossentropy'
, metrics=['accuracy'])
ckpt = ModelCheckpoint(filepath=save_path, monitor='val_loss', save_best_only=False,
save_weights_only=True, mode='auto', period=10)
callbacks_list = [ckpt]
parallel_model.fit(x=training_set.make_one_shot_iterator(),
steps_per_epoch=int(18288 / FLAGS.batch_size),
batch_size=FLAGS.batch_size,
epochs=500000,
validation_data=validation_set.make_one_shot_iterator(),
validation_steps=int(18288 / FLAGS.batch_size),
callbacks=callbacks_list)
def discriminator_model(self):
if self.DM:
return self.DM
optimizer = RMSprop(lr=2e-4, decay=1e-8)
self.DM = Sequential()
self.DM.add(self.discriminator())
#multi_gpu
with tf.device('/cpu:0'):
self.DM = multi_gpu_model(self.DM, gpus=4)
self.DM.compile(loss='binary_crossentropy', optimizer=optimizer,\
metrics=['accuracy'])
return self.DM
def opt_init(self):
opt = Adam(lr=self.lr,
beta_1=0.9,
beta_2=0.999,
decay=0.01,
epsilon=10e-8)
if self.gpu_nums > 1:
self.ctc_model = multi_gpu_model(self.ctc_model,
gpus=self.gpu_nums)
self.ctc_model.compile(loss={
'ctc': lambda y_true, output: output
},
optimizer=opt,
metrics=['accuracy'])
self.ctc_model.summary()
def generate(self):
model_path = os.path.expanduser(self.model_path)
assert model_path.endswith(
'.h5'), 'Keras model or weights must be a .h5 file.'
# Load model, or construct model and load weights.
num_anchors = len(self.anchors)
num_classes = len(self.class_names)
is_tiny_version = num_anchors == 6 # default setting
try:
self.yolo_model = load_model(model_path, compile=False)
except:
self.yolo_model = tiny_yolo_body(Input(shape=(None,None,3)), num_anchors//2, num_classes) \
if is_tiny_version else yolo_body(Input(shape=(None,None,3)), num_anchors//3, num_classes)
self.yolo_model.load_weights(
self.model_path) # make sure model, anchors and classes match
else:
assert self.yolo_model.layers[-1].output_shape[-1] == \
num_anchors/len(self.yolo_model.output) * (num_classes + 5), \
'Mismatch between model and given anchor and class sizes'
print('{} model, anchors, and classes loaded.'.format(model_path))
# Generate colors for drawing bounding boxes.
hsv_tuples = [(x / len(self.class_names), 1., 1.)
for x in range(len(self.class_names))]
self.colors = list(map(lambda x: colorsys.hsv_to_rgb(*x), hsv_tuples))
self.colors = list(
map(lambda x: (int(x[0] * 255), int(x[1] * 255), int(x[2] * 255)),
self.colors))
np.random.seed(10101) # Fixed seed for consistent colors across runs.
np.random.shuffle(
self.colors) # Shuffle colors to decorrelate adjacent classes.
np.random.seed(None) # Reset seed to default.
# Generate output tensor targets for filtered bounding boxes.
self.input_image_shape = K.placeholder(shape=(2, ))
if self.gpu_num >= 2:
self.yolo_model = multi_gpu_model(self.yolo_model,
gpus=self.gpu_num)
boxes, scores, classes = yolo_eval(self.yolo_model.output,
self.anchors,
len(self.class_names),
self.input_image_shape,
score_threshold=self.score,
iou_threshold=self.iou)
return boxes, scores, classes
def load(self, save_path):
"""
Load model weights, handles multi_gpu
"""
# multi gpu
if self.n_gpu > 1:
# cpu_merge used for nv_link : https://keras.io/utils/#multi_gpu_model
# otherwise use : model = multi_gpu_model(model, cpu_relocation=True)
# to train models with weights merge on CPU using cpu_relocation
self.model = multi_gpu_model(self.model,
gpus=self.n_gpu,
cpu_merge=False)
self.model.layers[-2].load_weights(save_path)
else:
self.model.load_weights(save_path)
self.model.compile(optimizer=self.optimizer,
loss='categorical_crossentropy',
metrics=self.metrics)
print(self.model.summary())
def fitness(learning_rate, num_dense_layers,
num_epochs, num_conv_layers, kernel_size, num_filters):
"""
Hyper-parameters:
learning_rate: Learning-rate for the optimizer.
num_dense_layers: Number of dense layers.
num_conv_layers: Number of nodes in each conv layer.
kernel_size: kernel_size function for all layers.
num_filters: Number of Filters
"""
# Print the hyper-parameters.
print('learning rate: {0:.1e}'.format(learning_rate))
print('num_dense_layers:', num_dense_layers)
print('num_conv_layers:', num_conv_layers)
print('kernel_size:', kernel_size)
print('num_filters:', num_filters)
print()
# Create the neural network with these hyper-parameters.
model = create_model(learning_rate=learning_rate,
num_dense_layers=num_dense_layers,
num_epochs=num_epochs,
num_conv_layers=num_conv_layers,
kernel_size=kernel_size,
num_filters=num_filters)
# Dir-name for the TensorBoard log-files.
log_dir = log_dir_name(learning_rate, num_dense_layers,
num_conv_layers, kernel_size, num_filters)
# Create a callback-function for Keras which will be
# run after each epoch has ended during training.
# This saves the log-files for TensorBoard.
# Note that there are complications when histogram_freq=1.
# It might give strange errors and it also does not properly
# support Keras data-generators for the validation-set.
callback_log = TensorBoard(
log_dir=log_dir,
batch_size=16,
write_graph=True,
write_grads=False,
write_images=False)
# Use Keras to train the model.
#checker = torque[crossValidation:index]
data_inputs = {}
data_inputs['images'] = imageArray[0:crossValidation]
data_inputs['roll'] = roll[0:crossValidation]
data_inputs['pitch'] = pitch[0:crossValidation]
parallel_model = multi_gpu_model(model, gpus=4)
optimizer = Adam(lr=learning_rate, clipnorm=1.0, clipvalue=0.5)
parallel_model.compile(optimizer=optimizer,
loss='mean_squared_error',
metrics=['mse'])
history = parallel_model.fit(x=data_inputs,
y=torque[0:crossValidation],
epochs=num_epochs,
batch_size=15,
shuffle=False,
validation_data=validation_data,
callbacks=[callback_log])
# Get the classification accuracy on the validation-set
# after the last training-epoch.
accuracy = history.history['val_loss'][-1]
# Print the classification accuracy.
print()
print("Error: {}".format(accuracy))
print()
# Save the model if it improves on the best-found performance.
# We use the global keyword so we update the variable outside
# of this function.
global best_accuracy
# If the classification accuracy of the saved model is improved ...
if accuracy < best_accuracy:
# Save the new model to harddisk.
model.save(path_best_model)
# Update the classification accuracy.
best_accuracy = accuracy
# Delete the Keras model with these hyper-parameters from memory.
del model
# Clear the Keras session, otherwise it will keep adding new
# models to the same TensorFlow graph each time we create
# a model with a different set of hyper-parameters.
K.clear_session()
# NOTE: Scikit-optimize does minimization so it tries to
# find a set of hyper-parameters with the LOWEST fitness-value.
# Because we are interested in the HIGHEST classification
# accuracy, we need to negate this number so it can be minimized.
return accuracy
def main():
try:
opts, args = getopt.getopt(sys.argv[1:], "ihlmcwhbendw", [
"help", "input=", "learningrate=", "model=", "channel=", "width=",
"height=", "batch=", "epoch=", "normalize=", "depth=", "weights="
])
except getopt.GetoptError as err:
print(str(err))
help()
sys.exit(1)
#Default Parmas
CHANNEL = 3
WIDTH = 32
HEIGHT = 32
BATCH_SIZE = 32
LEARNING_RATE = 0.001
MODEL = "mlp"
EPOCH = 1000
Gdalimg_path = '../data/training/'
NORM_PATH = '../data/training/norm.txt'
RESNET_DEPTH = 20
SAVE_PATH = 'saved_models/' + MODEL + "_" + str(LEARNING_RATE) + ".h5"
for opt, arg in opts:
if opt == "h" or opt == "--help":
help()
sys.exit(1)
elif opt == "l" or opt == "--learningrate":
LEARNING_RATE = float(arg)
elif opt == "m" or opt == "--model":
MODEL = arg
elif opt == "c" or opt == "--channel":
CHANNEL = int(arg)
elif opt == "w" or opt == "--width":
WIDTH = int(arg)
elif opt == "h" or opt == "--height":
HEIGHT = int(arg)
elif opt == "b" or opt == "--batch":
BATCH = int(arg)
elif opt == "e" or opt == "--epoch":
EPOCH = int(arg)
elif opt == "i" or opt == "--input":
Gdalimg_path = arg
elif opt == "n" or opt == "--normalize":
NORM_PATH = arg
elif opt == "d" or opt == "--depth":
RESNET_DEPTH = int(arg)
elif opt == "w" or opt == "--weights":
SAVE_PATH = arg + ".h5"
(total_imgs, total_labels,
num_categ) = GdalDataLoader(Gdalimg_path).getAllImages(
CHANNEL, WIDTH, HEIGHT, True, False, True, NORM_PATH)
print("NUMCATEG: " + str(num_categ))
total_labels = to_categorical(total_labels)
if MODEL == "mlp":
model = mlp_model(total_imgs.shape[1:], num_categ)
elif MODEL == "simple_cnn":
model = simple_cnn_model(total_imgs.shape[1:], num_categ)
elif MODEL == "resnet":
model = resnet_model(total_imgs.shape[1:], RESNET_DEPTH, num_categ)
else:
model = mlp_model(total_imgs.shape[1:], num_categ)
model = multi_gpu_model(model, gpus=4)
sgd = SGD(lr=LEARNING_RATE)
model.compile(optimizer=sgd,
loss='categorical_crossentropy',
metrics=['accuracy'])
model.fit(total_imgs,
total_labels,
epochs=EPOCH,
batch_size=BATCH_SIZE,
validation_split=0.1,
shuffle=True,
verbose=2)
model.save(SAVE_PATH)
def transformer2(ih, iw, nb_conv, size_conv, nb_gpu=1):
"""
The simple cnn model for image transformation with 2 times of downsampling. It is a choice for fast running.
However, it will lose resolution during the transformation.
Parameters
----------
ih, iw : int
The input image dimension
nb_conv : int
Number of convolution kernels for each layer
size_conv : int
The size of convolution kernel
Returns
-------
mdl
Description.
"""
inputs = Input((ih, iw, 1))
conv1 = Conv2D(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(inputs)
conv1 = Conv2D(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(conv1)
pool1 = MaxPooling2D(pool_size=(2, 2))(conv1)
conv2 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(pool1)
conv2 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv2)
pool2 = MaxPooling2D(pool_size=(2, 2))(conv2)
conv3 = Conv2D(nb_conv * 4, (size_conv, size_conv),
activation='relu',
padding='same')(pool2)
#
fc1 = Flatten()(conv3)
fc1 = Dense(iw * ih / 16)(fc1)
fc1 = Reshape((ih // 4, iw // 4, 1))(fc1)
conv4 = Conv2DTranspose(nb_conv * 4, (size_conv, size_conv),
activation='relu',
padding='same')(fc1)
up1 = concatenate([UpSampling2D(size=(2, 2))(conv4), conv2], axis=3)
conv6 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(up1)
conv6 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv6)
up2 = concatenate([UpSampling2D(size=(2, 2))(conv6), conv1], axis=3)
conv7 = Conv2DTranspose(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(up2)
conv7 = Conv2DTranspose(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(conv7)
conv8 = Conv2DTranspose(1, (size_conv, size_conv),
activation='relu',
padding='same')(conv7)
mdl = Model(inputs=inputs, outputs=conv8)
if nb_gpu > 1:
mdl = multi_gpu_model(mdl, nb_gpu)
mdl.compile(loss='mse', optimizer='Adam')
return mdl
validation_data=validation_generator,
epochs=epochs,
use_multiprocessing=False,
callbacks=callbacks,
workers=4)
# check weights
weights = keras.backend.batch_get_value(model.weights)
if all([np.all(w == ow) for w, ow in zip(weights, original_weights)]):
print('Weights in the template model have not changed')
else:
print('Weights in the template model have changed')
else:
# 2 gpus
original_weights = keras.backend.batch_get_value(model.weights)
parallel_model = multi_gpu_model(model,
gpus=gpus,
cpu_relocation=False,
cpu_merge=True)
parallel_model.compile(optimizer=Adam(lr=1e-3),
loss='mean_squared_error',
metrics=[r_squared])
history = parallel_model.fit_generator(
generator=training_generator,
validation_data=validation_generator,
epochs=epochs,
use_multiprocessing=False,
callbacks=[tensorboard],
workers=4)
# check weights
# https://github.com/keras-team/keras/issues/11313
weights = keras.backend.batch_get_value(model.weights)
parallel_weights = keras.backend.batch_get_value(parallel_model.weights)
vehicle = np.zeros_like(y)
construction[y==2] = 255.
human[y==6] = 255.
vehicle[y==7] = 255.
result = img.copy()
alpha = 0.4
img[:,:,1] = construction
img[:,:,2] = vehicle
img[:,:,0] = human
cv2.addWeighted(img, alpha, result, 1-alpha, 0, result)
cv2.imwrite(f'outputs/{epoch}.png', cv2.cvtColor(result, cv2.COLOR_RGB2BGR))
print('Wrote file to disk')
unet = DilatedNet(256, 256, 8,use_ctx_module=True, bn=True)
p_unet = multi_gpu_model(unet, 4)
p_unet.compile(optimizer='adam', loss='categorical_crossentropy', metrics=[dice_coeff, 'accuracy'])
tb = TensorBoard(log_dir='logs', write_graph=True)
mc = ModelCheckpoint(mode='max', filepath='models-dr/pdilated.h5', monitor='acc', save_best_only='True', save_weights_only='True', verbose=1)
es = EarlyStopping(mode='max', monitor='acc', patience=6, verbose=1)
vis = visualize()
callbacks = [tb, mc, es]
train_gen = seg_gen(image_list, mask_list, batch_size)
p_unet.fit_generator(train_gen, steps_per_epoch=steps, epochs=8, callbacks=callbacks, workers=8)
print('Saving final weights')
unet.save_weights('dilated.h5')
def run(self):
tf.compat.v1.disable_eager_execution()
# 입력 값을 받게 추가합니다.
parser = argparse.ArgumentParser()
parser.add_argument('--learning_rate',
required=False,
type=float,
default=0.001)
parser.add_argument('--dropout_rate',
required=False,
type=float,
default=0.2)
parser.add_argument('--batch_size',
required=False,
type=int,
default=16)
parser.add_argument('--epoch', required=False, type=int, default=10)
# relu, sigmoid, softmax, tanh
parser.add_argument('--act', required=False, type=str, default='relu')
args = parser.parse_args()
input = Input(shape=(200, 200, 3))
model = InceptionV3(input_tensor=input,
include_top=False,
weights='imagenet',
pooling='max')
for layer in model.layers:
layer.trainable = False
input_image_size = (200, 200)
x = model.output
x = Dense(1024, name='fully')(x)
x = Dropout(args.dropout_rate)(x)
x = BatchNormalization()(x)
x = Activation(args.act)(x)
x = Dense(512)(x)
x = Dropout(args.dropout_rate)(x)
x = BatchNormalization()(x)
x = Activation(args.act)(x)
x = Dense(101, activation='softmax', name='softmax')(x)
model = Model(model.input, x)
model.summary()
train_datagen = ImageDataGenerator(rescale=1. / 255,
validation_split=0.2)
batch_size = args.batch_size
train_generator = train_datagen.flow_from_directory(
'/result/caltech101',
target_size=input_image_size,
batch_size=batch_size,
class_mode='categorical',
subset='training')
validation_generator = train_datagen.flow_from_directory(
'/result/caltech101',
target_size=input_image_size,
batch_size=batch_size,
class_mode='categorical',
subset='validation')
model = multi_gpu_model(model, gpus=2)
model.compile(
optimizer=tf.keras.optimizers.Adam(lr=args.learning_rate),
loss='categorical_crossentropy',
metrics=['acc'])
early_stopping = EarlyStopping(patience=20,
mode='auto',
monitor='val_acc')
hist = model.fit_generator(
train_generator,
verbose=0,
steps_per_epoch=train_generator.samples // batch_size,
validation_data=validation_generator,
epochs=args.epoch,
callbacks=[early_stopping, KatibMetricLog()])
x = Conv2D(filters=512,
kernel_size=(3, 3),
strides=(1, 1),
padding='same',
name='block5_conv4')(x)
x = BatchNormalization()(x)
x = ReLU()(x)
x = MaxPool2D(pool_size=(2, 2), strides=(2, 2))(x)
x = GlobalAveragePooling2D()(x)
x = Dense(units=53, activation='softmax', name='output_predictions')(x)
model = Model(inputs=input_image, outputs=x, name='Classifier')
# In[3]:
parallel_model = multi_gpu_model(model=model, gpus=4)
tb = TensorBoard(log_dir='logs', write_graph=True)
mc = ModelCheckpoint(filepath='models/top_weights.h5',
monitor='val_acc',
save_best_only='True',
save_weights_only='True',
verbose=1)
es = EarlyStopping(monitor='val_loss', patience=15, verbose=1)
rlr = ReduceLROnPlateau()
callbacks = [tb, mc, es, rlr]
nadam = Nadam(lr=1e-3)
parallel_model.compile(optimizer=nadam,
loss='categorical_crossentropy',
metrics=['accuracy'])
# In[ ]:
def __init__(self, input_size, weights_path, normalizer, isTraining):
encoder_inputs = Input(shape=input_size)
# create the autoencoder, load the pre-trained weights
autoenc = ConvAutoencoder([input_size[0], input_size[1], 3],
norm="instance",
isTraining=False)
autoenc.autoencoder.load_weights(weights_path)
# freeze the weights
autoenc.isNotTraining()
# create the encoder
encoder_model = Model(
inputs=autoenc.autoencoder.input,
outputs=autoenc.autoencoder.get_layer('autoencoder').get_layer(
name='bottleneck_relu_layer').output)
encoder_model.trainable = False
# encode each image individually through the pre-trained encoder
encoded_img_list = []
index = 1
for i in range(0, input_size[2], 3):
x = Lambda(lambda x: x[:, :, :, i:i + 3],
name='img_{}'.format(str(index)))(encoder_inputs)
encoded_img_list.append(encoder_model(x))
index += 1
# concatenate the encodings
x = Concatenate(axis=3, name='conc_img_features')(encoded_img_list)
# global convolutions
for i in range(2):
x = Conv2D(int(2048 / 2**i),
3,
activation=None,
padding='same',
strides=1,
name='{}_decoder_conv{}_{}'.format(
"conc_conv", index, i + 2))(x)
x = normalize(
x, '{}_decoder_norm{}_{}'.format("conc_conv", index, i + 2),
'instance', True)
x = LeakyReLU()(x)
# decoder blocks
for i in range(5):
x = big_dec_block_leaky(x, int(1024 / 2**i), i + 1, normalizer,
isTraining, "D2")
out = Conv2D(3,
3,
activation='tanh',
padding='same',
name='final_conv')(x)
self.stitchdecoder = Model(inputs=encoder_inputs,
outputs=out,
name='stitcher')
self.stitchdecoder.summary()
# enable multi-gpu-processing
self.stitchdecoder = multi_gpu_model(self.stitchdecoder, gpus=2)
self.stitchdecoder.compile(
optimizer=tf.keras.optimizers.Adam(lr=0.0001),
loss=vgg_loss,
metrics=[
'accuracy', stitched_PSNR, stitched_ssim,
perceptual_stitched_loss, mae_loss
])
def train_on_texts(self,
texts,
context_labels=None,
batch_size=128,
num_epochs=50,
verbose=1,
new_model=False,
gen_epochs=1,
train_size=1.0,
max_gen_length=300,
validation=True,
dropout=0.0,
via_new_model=False,
save_epochs=0,
multi_gpu=False,
**kwargs):
if new_model and not via_new_model:
self.train_new_model(texts,
context_labels=context_labels,
num_epochs=num_epochs,
gen_epochs=gen_epochs,
train_size=train_size,
batch_size=batch_size,
dropout=dropout,
validation=validation,
save_epochs=save_epochs,
multi_gpu=multi_gpu,
**kwargs)
return
if context_labels:
context_labels = LabelBinarizer().fit_transform(context_labels)
if 'prop_keep' in kwargs:
train_size = prop_keep
if self.config['word_level']:
texts = [text_to_word_sequence(text, filters='') for text in texts]
# calculate all combinations of text indices + token indices
indices_list = [
np.meshgrid(np.array(i), np.arange(len(text) + 1))
for i, text in enumerate(texts)
]
indices_list = np.block(indices_list)
# If a single text, there will be 2 extra indices, so remove them
# Also remove first sequences which use padding
if self.config['single_text']:
indices_list = indices_list[self.config['max_length']:-2, :]
indices_mask = np.random.rand(indices_list.shape[0]) < train_size
if multi_gpu:
num_gpus = len(K.tensorflow_backend._get_available_gpus())
batch_size = batch_size * num_gpus
gen_val = None
val_steps = None
if train_size < 1.0 and validation:
indices_list_val = indices_list[~indices_mask, :]
gen_val = generate_sequences_from_texts(texts, indices_list_val,
self, context_labels,
batch_size)
val_steps = max(
int(np.floor(indices_list_val.shape[0] / batch_size)), 1)
indices_list = indices_list[indices_mask, :]
num_tokens = indices_list.shape[0]
assert num_tokens >= batch_size, "Fewer tokens than batch_size."
level = 'word' if self.config['word_level'] else 'character'
print("Training on {:,} {} sequences.".format(num_tokens, level))
steps_per_epoch = max(int(np.floor(num_tokens / batch_size)), 1)
gen = generate_sequences_from_texts(texts, indices_list, self,
context_labels, batch_size)
base_lr = 4e-3
# scheduler function must be defined inline.
def lr_linear_decay(epoch):
return (base_lr * (1 - (epoch / num_epochs)))
if context_labels is not None:
if new_model:
weights_path = None
else:
weights_path = "{}_weights.hdf5".format(self.config['name'])
self.save(weights_path)
self.model = textgenrnn_model(self.num_classes,
dropout=dropout,
cfg=self.config,
context_size=context_labels.shape[1],
weights_path=weights_path)
model_t = self.model
if multi_gpu:
# Do not locate model/merge on CPU since sample sizes are small.
parallel_model = multi_gpu_model(self.model,
gpus=num_gpus,
cpu_merge=False)
parallel_model.compile(loss='categorical_crossentropy',
optimizer=RMSprop(lr=4e-3, rho=0.99))
model_t = parallel_model
print("Training on {} GPUs.".format(num_gpus))
model_t.fit_generator(gen,
steps_per_epoch=steps_per_epoch,
epochs=num_epochs,
callbacks=[
LearningRateScheduler(lr_linear_decay),
generate_after_epoch(self, gen_epochs,
max_gen_length),
save_model_weights(self, num_epochs,
save_epochs)
],
verbose=verbose,
max_queue_size=10,
validation_data=gen_val,
validation_steps=val_steps)
# Keep the text-only version of the model if using context labels
if context_labels is not None:
self.model = Model(inputs=self.model.input[0],
outputs=self.model.output[1])
def create_model(pretrained_weights=None, input_size=None):
"""
A fairly standard U-Net with skip connections and an increased receptive field
"""
inputs = Input(input_size)
conv1 = Conv2D(64, 15, activation='relu', padding='same')(inputs)
conv1 = Conv2D(64, 15, activation='relu', padding='same')(conv1)
pool1 = MaxPooling2D(pool_size=(2, 2))(conv1)
conv2 = Conv2D(128, 13, activation='relu', padding='same')(pool1)
conv2 = Conv2D(128, 13, activation='relu', padding='same',
dilation_rate=2)(conv2)
pool2 = MaxPooling2D(pool_size=(2, 2))(conv2)
conv3 = Conv2D(256, 13, activation='relu', padding='same')(pool2)
conv3 = Conv2D(256, 13, activation='relu', padding='same',
dilation_rate=2)(conv3)
pool3 = MaxPooling2D(pool_size=(2, 2))(conv3)
conv4 = Conv2D(512, 9, activation='relu', padding='same')(pool3)
conv4 = Conv2D(512, 9, activation='relu', padding='same')(conv4)
pool4 = MaxPooling2D(pool_size=(2, 2))(conv4)
conv5 = Conv2D(1024, 6, activation='relu', padding='same')(pool4)
conv5 = Conv2D(1024, 3, activation='relu', padding='same')(conv5)
up6 = Conv2DTranspose(512,
2,
activation='relu',
padding='same',
strides=(2, 2))(conv5)
merge6 = concatenate([conv4, up6], axis=3)
conv6 = Conv2D(512, 3, activation='relu', padding='same')(merge6)
conv6 = Conv2D(512, 3, activation='relu', padding='same')(conv6)
up7 = Conv2DTranspose(256,
2,
activation='relu',
padding='same',
strides=(2, 2))(conv6)
merge7 = concatenate([conv3, up7], axis=3)
conv7 = Conv2D(256, 3, activation='relu', padding='same')(merge7)
conv7 = Conv2D(256, 3, activation='relu', padding='same')(conv7)
up8 = Conv2DTranspose(128,
2,
activation='relu',
padding='same',
strides=(2, 2))(conv7)
merge8 = concatenate([conv2, up8], axis=3)
conv8 = Conv2D(128, 3, activation='relu', padding='same')(merge8)
conv8 = Conv2D(128, 3, activation='relu', padding='same')(conv8)
up9 = Conv2DTranspose(64,
2,
activation='relu',
padding='same',
strides=(2, 2))(conv8)
merge9 = concatenate([conv1, up9], axis=3)
conv9 = Conv2D(64, 3, activation='relu', padding='same')(merge9)
conv9 = Conv2D(64, 3, activation='relu', padding='same')(conv9)
up10 = Conv2DTranspose(32,
2,
activation='relu',
padding='same',
strides=(2, 2))(conv9)
conv10 = Conv2D(32, 3, activation='relu', padding='same')(up10)
out = Conv2D(3, 3, activation='tanh', padding='same', strides=1)(conv10)
model = Model(inputs=inputs, outputs=out)
model = multi_gpu_model(model, gpus=2)
model.compile(optimizer='adam',
loss=l1_loss.custom_loss,
metrics=['accuracy', stitched_PSNR, stitched_ssim])
model.summary()
if pretrained_weights:
model.load_weights(pretrained_weights)
return model
drop = 0.5
epochs_drop = 3.0
lrate = initial_lrate * \
math.pow(drop, math.floor((1 + epoch) / epochs_drop))
print(f'Setting lr =>{lrate}')
return lrate
model = DeepLabV3Plus(img_height, img_width, classes)
try:
print('Loading previous weights')
model.load_weights('top_weights.h5')
except:
print('Training from scratch !!!')
print('*** Building multi_gpu_model ***')
pmodel = multi_gpu_model(model, 4)
pmodel.compile(optimizer=Adam(lr=1e-4),
loss='sparse_categorical_crossentropy',
metrics=['accuracy'])
print('*** Building multi_gpu_model completed ***')
tb = TensorBoard(log_dir='logs', write_graph=True)
mc = ModelCheckpoint(mode='max',
filepath='top_weights.h5',
monitor='val_acc',
save_best_only='True',
save_weights_only='True',
verbose=1)
lrsched = LearningRateScheduler(lr_sched)
viz = TensorBoardImage('validation_images')
callbacks = [mc, viz, tb]
dnn_feature_columns = fixlen_feature_columns
linear_feature_columns = fixlen_feature_columns
feature_names = get_feature_names(linear_feature_columns +
dnn_feature_columns)
# 3.generate input data for model
train, test = train_test_split(data, test_size=0.2)
train_model_input = {name: train[name] for name in feature_names}
test_model_input = {name: test[name] for name in feature_names}
# 4.Define Model,train,predict and evaluate
model = DeepFM(linear_feature_columns, dnn_feature_columns, task='binary')
model = multi_gpu_model(model, gpus=2)
model.compile(
"adam",
"binary_crossentropy",
metrics=['binary_crossentropy'],
)
history = model.fit(
train_model_input,
train[target].values,
batch_size=256,
epochs=10,
verbose=2,
validation_split=0.2,
)
def transformer3_pooling(ih, iw, nb_conv, size_conv, nb_gpu):
"""
The cnn image transformation model with 3 times of downsampling. The downsampling uses maxpooling.
Parameters
----------
ih, iw : int
The input image dimension
nb_conv : int
Number of convolution kernels for each layer
size_conv : int
The size of convolution kernel
Returns
-------
mdl
Description.
"""
inputs = Input((ih, iw, 1))
conv1 = Conv2D(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(inputs)
conv1 = Conv2D(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(conv1)
pool1 = MaxPooling2D(pool_size=(2, 2))(conv1)
conv2 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(pool1)
conv2 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv2)
pool2 = MaxPooling2D(pool_size=(2, 2))(conv2)
conv3 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(pool2)
conv3 = Conv2D(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv3)
pool3 = MaxPooling2D(pool_size=(2, 2))(conv3)
conv4 = Conv2D(nb_conv * 4, (size_conv, size_conv),
activation='relu',
padding='same')(pool3)
conv4 = Conv2D(nb_conv * 4, (size_conv, size_conv),
activation='relu',
padding='same')(conv4)
conv4 = Conv2D(1, (size_conv, size_conv),
activation='relu',
padding='same')(conv4)
#
fc1 = Flatten()(conv4)
fc1 = Dense(iw * ih / 128, activation='relu')(fc1)
fc1 = Dropout(0.2)(fc1)
fc1 = Dense(iw * ih / 128, activation='relu')(fc1)
fc1 = Dropout(0.25)(fc1)
fc1 = Dense(iw * ih / 64, activation='relu')(fc1)
fc1 = Dropout(0.25)(fc1)
fc1 = Reshape((int(ih // 8), int(iw // 8), 1))(fc1)
fc2 = Conv2DTranspose(nb_conv * 4, (size_conv, size_conv),
activation='relu',
padding='same')(fc1)
fc2 = Conv2DTranspose(nb_conv * 8, (size_conv, size_conv),
activation='relu',
padding='same')(fc2)
up1 = concatenate([UpSampling2D(size=(2, 2))(fc2), conv3], axis=3)
conv6 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(up1)
conv6 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv6)
up2 = concatenate([UpSampling2D(size=(2, 2))(conv6), conv2], axis=3)
conv7 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(up2)
conv7 = Conv2DTranspose(nb_conv * 2, (size_conv, size_conv),
activation='relu',
padding='same')(conv7)
up3 = concatenate([UpSampling2D(size=(2, 2))(conv7), conv1], axis=3)
conv8 = Conv2DTranspose(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(up3)
conv8 = Conv2DTranspose(nb_conv, (size_conv, size_conv),
activation='relu',
padding='same')(conv8)
conv8 = Conv2DTranspose(1, (3, 3), activation='relu',
padding='same')(conv8)
mdl = Model(inputs=inputs, outputs=conv8)
if nb_gpu > 1:
mdl = multi_gpu_model(mdl, nb_gpu)
mdl.compile(loss='mse', optimizer='Adam')
return mdl
def __init__(self, ser_model, gpus):
pmodel = multi_gpu_model(ser_model, gpus)
self.__dict__.update(pmodel.__dict__)
self._smodel = ser_model
def train(parser):
config = json.load(open('./setting.json'))
d_num = parser.d_num
im_size = 256
weight_save_dir = config['weight_save_dir']
weight_dir = os.path.join(weight_save_dir, str(d_num))
os.makedirs(weight_dir,exist_ok=True)
weight_file=os.path.join(weight_dir,dt.today().strftime("%m%d")+'.h5')
START_TIME = time.time()
reporter = Reporter(parser=parser)
loader = Loader(parser=parser)
train_gen, valid_gen, test_gen = loader.return_gen(False)
train_steps, valid_steps, test_steps = loader.return_step()
# ---------------------------model----------------------------------
input_channel_count = parser.input_channel
output_channel_count = 3
first_layer_filter_count = parser.filter
if parser.eito:
network = UNet8(input_channel_count, output_channel_count, first_layer_filter_count, im_size=im_size, parser=parser)
else:
network = UNet(input_channel_count, output_channel_count, first_layer_filter_count, im_size=im_size, parser=parser)
model = network.get_model()
if not ON_WIN:
model = multi_gpu_model(model, gpus=2)
optimizer = tf.keras.optimizers.Adam(lr=parser.trainrate)
# model.compile(loss=[DiceLossByClass(im_size, 3).dice_coef_loss], optimizer=optimizer, metrics=[dice, dice_1, dice_2])
model.compile(loss='categorical_crossentropy', optimizer=optimizer, metrics=[dice, dice_1, dice_2])
model.summary()
# ---------------------------training----------------------------------
batch_size = parser.batch_size
epochs = parser.epoch
config = tf.ConfigProto()
config.gpu_options.per_process_gpu_memory_fraction = 0.9
config.gpu_options.allow_growth = True
sess = tf.Session(config=config)
logdir = os.path.join('./logs', dt.today().strftime("%Y%m%d_%H%M"))
os.makedirs(logdir, exist_ok=True)
tb_cb = TensorBoard(log_dir=logdir, histogram_freq=0, write_graph=True, write_images=True)
es_cb = EarlyStopping(monitor='val_loss', patience=parser.early_stopping, verbose=1, mode='auto')
mc_cb = ModelCheckpoint(filepath=weight_file, monitor='val_loss', verbose=1, save_best_only=True,
save_weights_only=False, mode='min', period=1)
print('dnum is:',d_num)
print("start training.")
print(valid_steps)
# Pythonジェネレータ（またはSequenceのインスタンス）によりバッチ毎に生成されたデータでモデルを訓練します．
history = model.fit_generator(
generator=train_gen,
steps_per_epoch=train_steps,
epochs=epochs,
max_queue_size=10 if ON_WIN else 32,
workers=1 if ON_WIN else WORKERS * gpu_count,
use_multiprocessing=False,
validation_steps=valid_steps,
validation_data=valid_gen,
# use_multiprocessing=True,
callbacks=[es_cb, tb_cb,mc_cb])
print("finish training. And start making predict.")
# ---------------------------predict----------------------------------
test_preds = model.predict_generator(test_gen, steps=test_steps, verbose=1)
ELAPSED_TIME = int(time.time() - START_TIME)
reporter.add_log_documents(f'ELAPSED_TIME:{ELAPSED_TIME} [sec]')
# ---------------------------report----------------------------------
parser.save_logs = True
if parser.save_logs:
reporter.add_val_loss(history.history['val_loss'])
reporter.add_val_dice(history.history['val_dice'])
reporter.add_model_name(network.__class__.__name__)
reporter.generate_main_dir()
reporter.plot_history(history)
reporter.save_params(history)
train_gen, valid_gen, test_gen, output_gen_path = loader.return_gen(return_path=True)
for i in range(min(train_steps, SAVE_BATCH_SIZE)):
batch_input, batch_teach = next(train_gen)
batch_preds = model.predict(batch_input)
reporter.plot_predict(batch_input, batch_preds, batch_teach, 'train', batch_num=i)
for i in range(min(valid_steps, SAVE_BATCH_SIZE)):
batch_input, batch_teach = next(valid_gen)
batch_preds = model.predict(batch_input)
reporter.plot_predict(batch_input, batch_preds, batch_teach, 'valid', batch_num=i)
for i in range(min(test_steps, SAVE_BATCH_SIZE)):
batch_input, batch_teach = next(test_gen)
batch_preds = model.predict(batch_input)
reporter.plot_predict(batch_input, batch_preds, batch_teach, 'test', batch_num=i)
if parser.output_predict:
print('make output_predict')
_, _, test_gen, output_gen_path = loader.return_gen(return_path=True)
for i in range(test_steps):
batch_output_path = next(output_gen_path)
batch_input, batch_teach = next(test_gen)
batch_preds = model.predict(batch_input)
reporter.output_predict(batch_preds,batch_output_path,suffix=parser.suffix)
