class Net(torch.nn.Module):
def __init__(self, dataset, data, args, adj=()):
super(Net, self).__init__()
self.data = data
self.conv1 = GCNConv(dataset.num_features,
16,
normalize=not args.use_gdc)
self.conv2 = GCNConv(16,
dataset.num_classes,
normalize=not args.use_gdc)
# print(adj)
if data.edge_attr == None:
data.edge_attr = torch.ones(data.edge_index[0].size(0))
if len(adj) == 0:
self.adj1 = SparseTensor(row=data.edge_index[0],
col=data.edge_index[1],
value=torch.clone(
data.edge_attr)).to(device)
# self.adj1 = (torch.clone(data.edge_index).to(device), torch.clone(data.edge_attr).to(device))
else:
self.adj1 = adj
self.adj2 = self.adj1.clone()
def forward(self):
x = self.data.x
# self.ei1, self.ew1 = self.adj1
# self.ei2, self.ew2 = self.adj2
x = F.relu(self.conv1(x, self.adj1))
x = F.dropout(x, training=self.training)
x = self.conv2(x, self.adj2)
return F.log_softmax(x, dim=1)
class Net(torch.nn.Module):
def __init__(self, dataset, data, args, adj=()):
super(Net, self).__init__()
self.data = data
if args.dataset == "F":
hidden = 128
else:
hidden = 16
self.conv1 = GCNConv(dataset.num_features, hidden,
normalize=not args.use_gdc)
self.conv2 = GCNConv(hidden, dataset.num_classes,
normalize=not args.use_gdc)
# print(adj)
if data.edge_attr == None:
data.edge_attr = torch.ones(data.edge_index[0].size(0))
if len(adj) == 0:
self.adj1 = SparseTensor(row=data.edge_index[0], col=data.edge_index[1], value=torch.clone(data.edge_attr)).to_torch_sparse_coo_tensor().to(device)
self.adj1 = self.adj1 + torch.eye(self.adj1.shape[0]).to_sparse().to(device)
# self.adj1 = (torch.clone(data.edge_index).to(device), torch.clone(data.edge_attr).to(device))
else:
self.adj1 = adj
self.id = torch.eye(self.adj1.shape[0]).to_sparse().to(device)
self.adj2 = self.adj1.clone()
def forward(self):
x = self.data.x
# self.ei1, self.ew1 = self.adj1
# self.ei2, self.ew2 = self.adj2
x = F.relu(self.conv1(x, SparseTensor.from_torch_sparse_coo_tensor(self.adj1 -self.id)))
x = F.dropout(x, training=self.training)
x = self.conv2(x, SparseTensor.from_torch_sparse_coo_tensor(self.adj2 - self.id))
return F.log_softmax(x, dim=1)
def laplace(adj: SparseTensor, lap_type=None):
M, N = adj.sizes()
assert M == N
row, col, val = adj.clone().coo()
val = col.new_ones(col.shape, dtype=adj.dtype()) if val is None else val
deg = adj.sum(0)
loop_index = torch.arange(N, device=adj.device()).unsqueeze_(0)
if lap_type in (None, "sym"):
deg05 = deg.pow(-0.5)
deg05[deg05 == float("inf")] = 0
wgt = deg05[row] * val * deg05[col]
wgt = torch.cat([-wgt.unsqueeze_(0), val.new_ones(1, N)], 1).squeeze_()
elif lap_type == "rw":
deg_inv = 1.0 / deg
deg_inv[deg_inv == float("inf")] = 0
wgt = deg_inv[row] * val
wgt = torch.cat([-wgt.unsqueeze_(0), val.new_ones(1, N)], 1).squeeze_()
elif lap_type == "comb":
wgt = torch.cat([-val.unsqueeze_(0), deg.unsqueeze_(0)], 1).squeeze_()
else:
raise TypeError("Invalid laplace type: {}".format(lap_type))
row = torch.cat([row.unsqueeze_(0), loop_index], 1).squeeze_()
col = torch.cat([col.unsqueeze_(0), loop_index], 1).squeeze_()
lap = SparseTensor(row=row, col=col, value=wgt, sparse_sizes=(M, N))
return lap
def normalize_laplace(L: SparseTensor, lam_max: float = 2.0):
Ln = L.clone()
row, col, val = Ln.coo()
diag_mask = row == col
val[...] = (2.0 * val) / lam_max
val.masked_fill_(val == float("inf"), 0)
val[diag_mask] -= 1
return Ln