#--------------------------------------------------------------------------------------- logger.info('*\t--> Started %s method execution - biochem_utils.py' % sys.argv[1]) method = (sys.argv[1]) # assign name of requested method if method == 'capping_1': biochem.capping_1() elif method == 'capping_2': biochem.capping_2() elif method == 'clean_flowcell': print "INFO\t *\t--> Please, enter reagent and cleaning iteration numbers separated by single space [integers]: ", v = sys.stdin.readline().strip().split(' ') # use stdin explicitly and remove trailing newline character biochem.clean_flowcell(int(v[0]), int(v[1])) elif method == 'clean_flowcell_and_syringe': print "INFO\t *\t--> Please, enter the number of cleaning iterations [integer]: ", iteration = int(sys.stdin.readline().strip()) # use stdin explicitly and remove trailing newline character biochem.clean_flowcell_and_syringe(iteration) elif method == 'clean_fluidics_system': print "INFO\t *\t--> Please, enter the number of cleaning iterations [integer]: ", iteration = int(sys.stdin.readline().strip()) # use stdin explicitly and remove trailing newline character biochem.clean_fluidics_system(iteration) elif method == 'clean_reagent_path': print "INFO\t *\t--> Please, enter: reagent and iteration numbers separated by single space [integers]: ", v = sys.stdin.readline().strip().split(' ') # use stdin explicitly and remove trailing newline character biochem.clean_reagent_path(int(v[0]), int(v[1]))