import sys
sys.path.append('/Users/npolizzi/Projects/combs/src/')
import combs
ifg_dict = {'LYS': 'CE NZ'}
csv_path = '/Users/npolizzi/Projects/combs/results/amino/20170725/csv/'
outpath = '/Users/npolizzi/Projects/combs/results/amino/rel_vdms_hbond/20171025/'
cb = combs.Comb(ifg_dict)
combs.make_all_rel_vdms_hbond(csv_path, outpath, cb, seq_distance=7)
# will output SC, N_CA, and C_O directories
import sys
from IFG_dicts import *
sys.path.append('/home/gpu/Sophia/combs/src/')
import combs
from sys import argv
script, ifg_dir, ifg = argv
ifg_sele = all_ifgs[ifg]
cb = combs.Comb(ifg_sele)
combs.make_bb_sc_rel_vdms(ifg_dir, cb)
