import sys sys.path.append('/Users/npolizzi/Projects/combs/src/') import combs ifg_dict = {'LYS': 'CE NZ'} csv_path = '/Users/npolizzi/Projects/combs/results/amino/20170725/csv/' outpath = '/Users/npolizzi/Projects/combs/results/amino/rel_vdms_hbond/20171025/' cb = combs.Comb(ifg_dict) combs.make_all_rel_vdms_hbond(csv_path, outpath, cb, seq_distance=7)
# will output SC, N_CA, and C_O directories import sys from IFG_dicts import * sys.path.append('/home/gpu/Sophia/combs/src/') import combs from sys import argv script, ifg_dir, ifg = argv ifg_sele = all_ifgs[ifg] cb = combs.Comb(ifg_sele) combs.make_bb_sc_rel_vdms(ifg_dir, cb)