def test_check_content(ingestcheck, client, tmpdirsec, case):
"""Dump the content and check that we get the reference dump file back.
"""
require_icat_version("4.6.0", "Issue icatproject/icat.server#155")
backend, filetype = case
refdump = backends[backend]['refdump']
fileext = backends[backend]['fileext']
dump = os.path.join(tmpdirsec, "dump" + fileext)
fdump = os.path.join(tmpdirsec, "dump-filter" + fileext)
reffdump = os.path.join(tmpdirsec, "dump-filter-ref" + fileext)
filter_file(refdump, reffdump, *backends[backend]['filter'])
if filetype == 'FILE':
icatdump(client, dump, backend)
elif filetype == 'MEMORY':
if 'b' in icat.dumpfile.Backends[backend][0].mode:
stream = io.BytesIO()
icatdump(client, stream, backend)
icatdata = stream.getvalue()
stream.close()
else:
stream = io.StringIO()
icatdump(client, stream, backend)
icatdata = stream.getvalue().encode('ascii')
stream.close()
with open(dump, "wb") as f:
f.write(icatdata)
else:
raise RuntimeError("Invalid file type %s" % filetype)
filter_file(dump, fdump, *backends[backend]['filter'])
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
def test_check_content(standardConfig, tmpdirsec):
"""Dump the resulting content and compare with a reference dump.
"""
dump = os.path.join(tmpdirsec.dir, "dump.yaml")
fdump = os.path.join(tmpdirsec.dir, "dump-filter.yaml")
reffdump = os.path.join(tmpdirsec.dir, "dump-filter-ref.yaml")
filter_file(refdump, reffdump, *yaml_filter)
args = standardConfig.cmdargs + ["-f", "YAML", "-o", dump]
callscript("icatdump.py", args)
filter_file(dump, fdump, *yaml_filter)
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
def test_check_content(standardConfig, tmpdirsec):
"""Dump the resulting content and compare with a reference dump.
"""
dump = os.path.join(tmpdirsec.dir, "dump.yaml")
fdump = os.path.join(tmpdirsec.dir, "dump-filter.yaml")
reffdump = os.path.join(tmpdirsec.dir, "dump-filter-ref.yaml")
filter_file(refdump, reffdump, *yaml_filter)
args = standardConfig.cmdargs + ["-f", "YAML", "-o", dump]
callscript("icatdump.py", args)
filter_file(dump, fdump, *yaml_filter)
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
def test_check_content(standardCmdArgs, tmpdirsec):
"""Dump the resulting content and compare with a reference dump.
"""
require_icat_version("4.6.0", "Issue icatproject/icat.server#155")
dump = os.path.join(tmpdirsec, "dump.yaml")
fdump = os.path.join(tmpdirsec, "dump-filter.yaml")
reffdump = os.path.join(tmpdirsec, "dump-filter-ref.yaml")
filter_file(refdump, reffdump, *yaml_filter)
args = standardCmdArgs + ["-f", "YAML", "-o", dump]
callscript("icatdump.py", args)
filter_file(dump, fdump, *yaml_filter)
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
def test_check_content_xml(standardConfig, tmpdirsec, backend):
"""Dump the content and check that we get the reference dump file back.
"""
refdump = backends[backend]['refdump']
fileext = backends[backend]['fileext']
dump = os.path.join(tmpdirsec.dir, "dump" + fileext)
fdump = os.path.join(tmpdirsec.dir, "dump-filter" + fileext)
reffdump = os.path.join(tmpdirsec.dir, "dump-filter-ref" + fileext)
filter_file(refdump, reffdump, *backends[backend]['filter'])
args = standardConfig.cmdargs + ["-f", backend, "-o", dump]
callscript("icatdump.py", args)
filter_file(dump, fdump, *backends[backend]['filter'])
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
def test_check_summary_user_yaml(tmpdirsec, user):
"""Check the number of objects from a user's point of view.
This checks which objects a given user may see and thus whether
the (read) access rules work as expected.
"""
summary = os.path.join(tmpdirsec.dir, "summary.%s" % user)
ref = refsummary[user]
reff = os.path.join(tmpdirsec.dir, "summary-filter-ref.%s" % user)
filter_file(ref, reff, *summary_filter)
conf = getConfig(confSection=user)
with open(summary, "wt") as out:
callscript("icatsummary.py", conf.cmdargs, stdout=out)
assert filecmp.cmp(reff, summary), "ICAT content was not as expected"
def test_check_content(ingestcheck, standardCmdArgs, tmpdirsec, case):
"""Dump the content and check that we get the reference dump file back.
"""
require_icat_version("4.6.0", "Issue icatproject/icat.server#155")
backend, filetype = case
refdump = backends[backend]['refdump']
fileext = backends[backend]['fileext']
dump = os.path.join(tmpdirsec, "dump" + fileext)
fdump = os.path.join(tmpdirsec, "dump-filter" + fileext)
reffdump = os.path.join(tmpdirsec, "dump-filter-ref" + fileext)
filter_file(refdump, reffdump, *backends[backend]['filter'])
if filetype == 'FILE':
args = standardCmdArgs + ["-f", backend, "-o", dump]
callscript("icatdump.py", args)
elif filetype == 'STDINOUT':
args = standardCmdArgs + ["-f", backend]
with open(dump, "wt") as outfile:
callscript("icatdump.py", args, stdout=outfile)
else:
raise RuntimeError("Invalid file type %s" % filetype)
filter_file(dump, fdump, *backends[backend]['filter'])
assert filecmp.cmp(reffdump, fdump), "content of ICAT was not as expected"
