def test_read(self): f = testdata_stream("genbank/cox2.gb") seqs = genbank_io.read(f) self.assertEqual(len(seqs), 5) self.assertEqual(len(seqs[1]), 210) f.seek(0) seqs = seq_io.read(f) self.assertEqual(len(seqs), 5) self.assertEqual(len(seqs[1]), 210) f.close() f = testdata_stream('genbank/NT_019265.gb') seqs = genbank_io.read(f) self.assertEqual(len(seqs), 0) f.close()
def test_parse(self) : for f in examples(): #print f.name seqs = genbank_io.read(f)
def test_parse(self): for f in examples(): # print f.name seqs = genbank_io.read(f) f.close()