def wcalResampleToLinearCoords(self,rc):
""" Uses the Wavecal fit_image solution
"""
# Instantiate the log
log = logutils.get_logger(__name__)
# Define the keyword to be used for the time stamp
timestamp_key = self.timestamp_keys["wcalResampleToLinearCoords"]
# Log the standard "starting primitive" debug message
log.debug(gt.log_message("primitive", "wcalResampleToLinearCoords",
"starting"))
# Initialize the list of output AstroData objects
adoutput_list = []
# Loop over each input AstroData object in the input list
for ad in rc.get_inputs_as_astrodata():
# Check for a wavelength solution
if ad["WAVECAL"] is None:
if "qa" in rc.context:
log.warning("No wavelength solution found for %s" %
ad.filename)
adout=ad # Don't do anything
else:
raise Errors.InputError("No wavelength solution found "\
"for %s" % ad.filename)
else:
# Wavelength solution found.
wc = Wavecal(ad)
wc.read_wavecal_table()
adout = wc.resample_image_asAstrodata()
# Add the appropriate time stamps to the PHU
gt.mark_history(adinput=adout, keyword=timestamp_key)
# Change the filename
adout.filename = gt.filename_updater(
adinput=adout, suffix=rc["suffix"], strip=True)
# Append the output AstroData object to the list
# of output AstroData objects
adoutput_list.append(adout)
# Report the list of output AstroData objects to the reduction
# context
rc.report_output(adoutput_list)
yield rc
def determineWaveCal(self,rc):
# Instantiate the log
log = logutils.get_logger(__name__)
# Define the keyword to be used for the time stamp
timestamp_key = self.timestamp_keys["determineWaveCalSolution"]
# Log the standard "starting primitive" debug message
log.debug(gt.log_message("primitive", "determineWaveCalSolution",
"starting"))
# Initialize the list of output AstroData objects
adoutput_list = []
# Loop over each input AstroData object in the input list
for ad in rc.get_inputs_as_astrodata():
try:
wc = Wavecal(ad,linelist= rc['linelist'],
fitfunction=rc['fitfunction'],
fitorder= rc['fitorder'],
match= rc['match'],
nsum= rc['nsum'],
ntmax= rc['ntmax'],
minsep= rc['minsep'],
debug= rc['debug'],
)
wc.wavecal() # Determine wave solution
wc.fit_image() # Fit image
tbout = wc.save_wavecal_fit() # Create a FITS BINARY table WAVECAL
#adout = deepcopy(ad)
#adout.append(tbout)
adout = ad
adout.append(tbout)
except Errors.OutputError:
if "qa" in rc.context:
log.warning("Wavecal failed for input " + ad.filename)
adoutput_list.append(ad)
continue
else:
raise Errors.ScienceError("Wavecal failed for input "+
ad.filename + ". Try interactive"+
"=True")
# Add the appropriate time stamps to the PHU
gt.mark_history(adinput=adout, keyword=timestamp_key)
# Change the filename
adout.filename = gt.filename_updater(
adinput=adout, suffix=rc["suffix"], strip=True)
# Append the output AstroData object to the list
# of output AstroData objects
adoutput_list.append(adout)
# Report the list of output AstroData objects to the reduction
# context
rc.report_output(adoutput_list)
yield rc