def test_list_runs(self): """List run folders""" run_folders = ["120106_SN12345_0144_AABC123CXX", "120521_M00123_0001_AFCGHY76-KTY500", "130423_D00134_0011_AD1Y4UACXX"] invalid_run_folders = ["ABC_SN123_0123_BASDC34CXX", "120106_SN12345_0144_CABC123CXX", "120521_K00123_0001_AFCGHY76-KTY500"] for d in run_folders + invalid_run_folders: os.mkdir(os.path.join(self.dump_folder,d)) rm = RunMonitor(self.config) rm.get_run_info = mock.Mock(return_value={}) rm.get_run_parameters = mock.Mock(return_value={}) runs = rm.list_runs() self.assertListEqual(sorted(run_folders), sorted([r['name'] for r in runs]), "Did not return expected list of runs") for d in run_folders + invalid_run_folders: shutil.rmtree(os.path.join(self.dump_folder,d))
def test_update_trello_board(self): """Update Trello list with runs""" run_folders = ["120106_SN12345_0144_AABC123CXX", "120521_M00123_0001_AFCGHY76-KTY500"] for d in run_folders: os.mkdir(os.path.join(self.dump_folder,d)) rm = RunMonitor(self.config) rm.get_run_projects = mock.Mock(return_value=['J.Doe_11_01','J.Moe_12_02']) rm.get_status_list = mock.Mock(return_value='First read') rm.get_run_info = mock.Mock(return_value={'Reads': [{'NumCycles': 50},{'IsIndexedRead': 'Y'},{'NumCycles': 50}]}) rm.get_run_parameters = mock.Mock(return_value={}) rm.update_trello_board() lst = rm.trello.get_list(rm.trello_board,'First read') for run in run_folders: card = rm.trello.get_card(lst,run) self.assertIsNotNone(card, "Could not locate created card for run") self.assertEqual(run, card.name, "Created card name and run name are not equal") shutil.rmtree(os.path.join(self.dump_folder,run)) # Move a card to another list run = {'name': run_folders[0]} rm.list_runs = mock.Mock(return_value=[run]) rm.get_status_list.return_value = 'Index read' rm.update_trello_board() lst = rm.trello.get_list(rm.trello_board,'Index read') card = rm.trello.get_card(lst,run['name']) self.assertIsNotNone(card, "Could not locate created card for run") self.assertEqual(run['name'], card.name, "Created card name and run name are not equal")