def update_run_status(self):
"""Update the status of runs on the run tracking board"""
# Create a RunMonitor object to update the run tracking board
from hugin.run_monitor import RunMonitor
rm = RunMonitor(self.config)
rm.run_folders = self.archive_folders
rm.samplesheet_folders = []
# Loop over the runs and check whether all samples and projects have been transferred to the
# analysis folder
for run in rm.list_runs():
print("Checking run {}".format(run['name']))
if self.get_run_status(run):
rm.set_run_completed(run)
# Loop over the projects in the run and move them to the bcbb list
# Note that this can cause the card to be moved back to sequencing by the run_monitor in case
# the project is sequenced on multiple flowcells. Has no good solution at this moment.
for project in run.get('projects',[]):
self.add_project_card(project,BCBB_ANALYSIS_IN_PROGRESS)
