import logging from pathlib import Path from hyo2.abc.lib.logging import set_logging from hyo2.abc.lib.testing_paths import TestingPaths from hyo2.openbst.lib.openbst import OpenBST set_logging(ns_list=[ "hyo2.openbst", ]) logger = logging.getLogger(__name__) # Set up project testing = TestingPaths(root_folder=Path(__file__).parents[2].resolve()) bst = OpenBST(prj_name="default", force_new=True) bst.prj.open_project_folder() # add file raw_path = testing.download_data_folder().joinpath('reson', '20190321_185116.s7k') bst.prj.add_raw(raw_path) raw_path = testing.download_data_folder().joinpath('reson', '20190730_144835.s7k') bst.prj.add_raw(raw_path) # import raws via project health check bst.prj.check_health() # remove a raw bst.prj.remove_raw(raw_path)
import time import logging from PySide2 import QtWidgets from hyo2.abc.app.qt_progress import QtProgress from hyo2.abc.lib.logging import set_logging logger = logging.getLogger(__name__) set_logging(ns_list=["hyo2.abc"]) app = QtWidgets.QApplication([]) widget = QtWidgets.QWidget() widget.show() progress = QtProgress(parent=widget) progress.start(title='Test Bar', text='Doing stuff') time.sleep(.1) progress.update(value=30, text='Updating') time.sleep(.1) print("canceled? %s" % progress.canceled) progress.end()
import logging from PySide2 import QtWidgets from hyo2.abc.app.qt_progress import QtProgress from hyo2.soundspeedmanager import app_info from hyo2.soundspeed.soundspeed import SoundSpeedLibrary from hyo2.soundspeedmanager.qt_callbacks import QtCallbacks from hyo2.abc.lib.logging import set_logging ns_list = [ "hyo2.soundspeed", "hyo2.soundspeedmanager", "hyo2.soundspeedsettings" ] set_logging(ns_list=ns_list) logger = logging.getLogger(__name__) # examples of test position: # - offshore Portsmouth: 43.026480, -70.318824 # - Indian Ocean: -19.1, 74.16 # - middle of Africa (in land): 18.2648113, 16.1761115 switch = "LEOFS" # WOA09 or WOA13 or RTOFS or GoMOFS or LEOFS or LHOFS app = QtWidgets.QApplication([]) # PySide stuff (start) mw = QtWidgets.QMainWindow() mw.show() lib = SoundSpeedLibrary(progress=QtProgress(parent=mw), callbacks=QtCallbacks(parent=mw))
import traceback from pathlib import Path from PySide2 import QtCore, QtWidgets import logging from hyo2.abc.app.app_style import AppStyle from hyo2.abc.lib.logging import set_logging from hyo2.qax.app.gui_settings import GuiSettings from hyo2.qax.app.mainwin import MainWin from hyo2.qax.lib.config import QaxConfig from hyo2.qax.lib.plugin import QaxPlugins logger = logging.getLogger(__name__) set_logging(ns_list=[ "hyo2.qax", ]) def qt_custom_handler(error_type: QtCore.QtMsgType, error_context: QtCore.QMessageLogContext, message: str): if "Cannot read property 'id' of null" in message: return if "The event loop is already running" in message: return logger.info("Qt error: %s [%s] -> %s" % (error_type, error_context, message)) for line in traceback.format_stack(): logger.debug("- %s" % line.strip())
import logging import sys from PySide2 import QtWidgets from hyo2.abc.lib.logging import set_logging from hyo2.kng.sis.app.mainwin import MainWin logger = logging.getLogger(__name__) set_logging(ns_list=[ "hyo2.kng", ]) def gui(): """create the main windows and the event loop""" app = QtWidgets.QApplication(sys.argv) main = MainWin() main.show() sys.exit(app.exec_())
import sys import traceback import logging from PySide2 import QtCore, QtWidgets from hyo2.abc.lib.logging import set_logging from hyo2.abc.app.app_style import AppStyle set_logging(ns_list=["hyo2.abc", "hyo2.soundspeed", "hyo2.soundspeedmanager", "hyo2.soundspeedsettings", "hyo2.surveydatamonitor"]) logger = logging.getLogger(__name__) def qt_custom_handler(error_type: QtCore.QtMsgType, error_context: QtCore.QMessageLogContext, message: str): logger.info("Qt error: %s [%s, %s:%s:%d, v.%s] -> %s" % (error_type, error_context.category, error_context.file, error_context.function, error_context.line, error_context.version, message)) for line in traceback.format_stack(): logger.debug("- %s" % line.strip()) QtCore.qInstallMessageHandler(qt_custom_handler) def gui(): """Create the application and show the Sound Speed Manager gui""" from hyo2.soundspeedmanager.mainwin import MainWin
def setUp(self): set_logging(ns_list=["test_logging"]) self.logger = logging.getLogger(__name__)
import sys import traceback import logging from PySide2 import QtCore, QtWidgets from hyo2.abc.lib.logging import set_logging from hyo2.abc.app.app_style import AppStyle set_logging(ns_list=["hyo2.abc", "hyo2.soundspeed", "hyo2.soundspeedmanager", "hyo2.soundspeedsettings"]) logger = logging.getLogger(__name__) def qt_custom_handler(error_type, error_context, message): logger.info("Qt error: %s [%s] -> %s" % (str(error_type), str(error_context), message)) for line in traceback.format_stack(): logger.debug("- %s" % line.strip()) QtCore.qInstallMessageHandler(qt_custom_handler) def gui(): """Run the Sound Speed Settings gui""" from hyo2.soundspeedsettings.mainwin import MainWin from hyo2.soundspeed.soundspeed import SoundSpeedLibrary app = QtWidgets.QApplication(sys.argv) app.setStyleSheet(AppStyle.load_stylesheet())
import os import numpy as np import logging from hyo2.abc.lib.logging import set_logging from hyo2.qc.survey.anomaly.anomaly_detector_v1_thresholds import ThresholdsV1 logger = logging.getLogger(__name__) set_logging(ns_list=["hyo2.ca", ]) np.random.seed(0) arr_sz = 1000 array = np.random.rand(arr_sz, arr_sz) * 150.0 array[5:8, 5:7] = np.nan array[15:18, 25:27] = np.nan # array[int(array.shape[0]*.2), int(array.shape[1]*.1)] = np.nan # array[int(array.shape[0]*.3), int(array.shape[1]*.1)] = np.nan # array[int(array.shape[0]*.1), int(array.shape[1]*.7)] = np.nan prev = None for j in range(2): # array = ThresholdsV1.nan_gaussian_filter(array) ths = ThresholdsV1() ths.calculate(array) # ths.plot()