def get_noise_sigma2_lenstronomy(img, pixel_scale, exposure_time, magnitude_zero_point, read_noise=None, ccd_gain=None, sky_brightness=None, seeing=None, num_exposures=1, psf_type='GAUSSIAN', kernel_point_source=None, truncation=5, data_count_unit='ADU', background_noise=None): """Get the variance of sky, readout, and Poisson flux noise sources using lenstronomy Parameters ---------- img : 2D numpy array image on which the noise will be evaluated pixel_scale : float pixel scale in arcsec/pixel exposure_time : float exposure time per image in seconds magnitude_zero_point : float magnitude at which 1 count per second per arcsecond square is registered read_noise : float std of noise generated by readout (in units of electrons) ccd_gain : float electrons/ADU (analog-to-digital unit). A gain of 8 means that the camera digitizes the CCD signal so that each ADU corresponds to 8 photoelectrons sky_brightness : float sky brightness (in magnitude per square arcsec) seeing : float fwhm of PSF num_exposures : float number of exposures that are combined psf_type : str type of PSF ('GAUSSIAN' and 'PIXEL' supported) kernel_point_source : 2d numpy array model of PSF centered with odd number of pixels per axis(optional when psf_type='PIXEL' is chosen) truncation : float Gaussian truncation (in units of sigma), only required for 'GAUSSIAN' model data_count_unit : str unit of the data (and other properties), 'e-': (electrons assumed to be IID), 'ADU': (analog-to-digital unit) background_noise : float sqrt(variance of background) as a total contribution from read noise, sky brightness, etc. in units of the data_count_units If you set this parameter, it will override read_noise, sky_brightness. Default: None Returns ------- dict variance in the poisson, sky, and readout noise sources """ single_band = SingleBand(pixel_scale, exposure_time, magnitude_zero_point, read_noise=read_noise, ccd_gain=ccd_gain, sky_brightness=sky_brightness, seeing=seeing, num_exposures=num_exposures, psf_type=psf_type, kernel_point_source=kernel_point_source, truncation=truncation, data_count_unit=data_count_unit, background_noise=background_noise) noise_sigma2 = {} noise_sigma2['poisson'] = single_band.flux_noise(img)**2.0 exposure_time_tot = single_band._num_exposures * single_band._exposure_time readout_noise_tot = single_band._num_exposures * single_band.read_noise**2.0 sky_per_pixel = single_band.sky_brightness * single_band.pixel_scale ** 2 noise_sigma2['sky'] = sky_per_pixel**2.0/exposure_time_tot noise_sigma2['readout'] = readout_noise_tot / exposure_time_tot**2.0 return noise_sigma2
def add_arc(image, kwargs_band, kwargs_params, kwargs_model, kwargs_numerics={}): """ routine to add lensed arc to existing image :param image: 2d square numpy array of original image :param kwargs_band: keyword arguments specifying the observation to be simulated according to lenstronomy.SimulationAPI :param kwargs_model: keyword arguments of model configurations. All possibilities available at lenstronom.Util.class_creator :param kwargs_params: keyword arguments of the different model components. Supports 'kwargs_lens', 'kwargs_source_mag', 'kwargs_lens_light_mag', 'kwargs_ps_mag' :param kwargs_numerics: keyword arguments describing the numerical setting of lenstronomy as outlined in lenstronomy.ImSim.Numerics :return: 2d numpy array """ numpix = len(image) arc = _arc_model(numpix, kwargs_band, kwargs_model, kwargs_numerics=kwargs_numerics, **kwargs_params) band = SingleBand(**kwargs_band) noisy_arc = arc + band.flux_noise(arc) return image + noisy_arc
class TestData(object): def setup(self): self.ccd_gain = 4. pixel_scale = 0.13 self.read_noise = 10. self.kwargs_instrument = { 'read_noise': self.read_noise, 'pixel_scale': pixel_scale, 'ccd_gain': self.ccd_gain } exposure_time = 100 sky_brightness = 20. self.magnitude_zero_point = 21. num_exposures = 2 seeing = 0.9 kwargs_observations = { 'exposure_time': exposure_time, 'sky_brightness': sky_brightness, 'magnitude_zero_point': self.magnitude_zero_point, 'num_exposures': num_exposures, 'seeing': seeing, 'psf_type': 'GAUSSIAN' } self.kwargs_data = util.merge_dicts(self.kwargs_instrument, kwargs_observations) self.data_adu = SingleBand(data_count_unit='ADU', **self.kwargs_data) self.data_e_ = SingleBand(data_count_unit='e-', **self.kwargs_data) def test_sky_brightness(self): sky_adu = self.data_adu.sky_brightness sky_e_ = self.data_e_.sky_brightness assert sky_e_ == sky_adu * self.ccd_gain npt.assert_almost_equal(sky_adu, 0.627971607877395, decimal=6) def test_background_noise(self): bkg_adu = self.data_adu.background_noise bkg_e_ = self.data_e_.background_noise assert bkg_adu == bkg_e_ / self.ccd_gain self.data_adu._background_noise = 1 bkg = self.data_adu.background_noise assert bkg == 1 def test_flux_noise(self): flux_iid = 50. flux_adu = flux_iid / self.ccd_gain noise_adu = self.data_adu.flux_noise(flux_adu) noise_e_ = self.data_e_.flux_noise(flux_iid) assert noise_e_ == 100. / 200. assert noise_e_ == noise_adu * self.ccd_gain def test_noise_for_model(self): model_adu = np.ones((10, 10)) model_e_ = model_adu * self.ccd_gain noise_adu = self.data_adu.noise_for_model(model_adu, background_noise=True, poisson_noise=True, seed=42) noise_adu_2 = self.data_adu.noise_for_model(model_adu, background_noise=True, poisson_noise=True, seed=42) npt.assert_almost_equal(noise_adu, noise_adu_2, decimal=10) noise_e_ = self.data_e_.noise_for_model(model_e_, background_noise=True, poisson_noise=True, seed=42) npt.assert_almost_equal(noise_adu, noise_e_ / self.ccd_gain, decimal=10) noise_e_ = self.data_e_.noise_for_model(model_e_, background_noise=True, poisson_noise=True, seed=None) def test_estimate_noise(self): image_adu = np.ones((10, 10)) image_e_ = image_adu * self.ccd_gain noise_adu = self.data_adu.estimate_noise(image_adu) noise_e_ = self.data_e_.estimate_noise(image_e_) npt.assert_almost_equal(noise_e_, noise_adu * self.ccd_gain) def test_magnitude2cps(self): mag_0 = self.data_adu.magnitude2cps( magnitude=self.magnitude_zero_point) npt.assert_almost_equal(mag_0, 1. / self.ccd_gain, decimal=10) mag_0_e_ = self.data_e_.magnitude2cps( magnitude=self.magnitude_zero_point) npt.assert_almost_equal(mag_0_e_, 1, decimal=10) mag_0 = self.data_adu.magnitude2cps( magnitude=self.magnitude_zero_point + 1) npt.assert_almost_equal(mag_0, 0.0995267926383743, decimal=10) mag_0 = self.data_adu.magnitude2cps( magnitude=self.magnitude_zero_point - 1) npt.assert_almost_equal(mag_0, 0.627971607877395, decimal=10) def test_flux_iid(self): flux_iid_adu = self.data_adu.flux_iid(flux_per_second=1) flux_iid_e = self.data_e_.flux_iid(flux_per_second=1) npt.assert_almost_equal(flux_iid_e, flux_iid_adu / self.ccd_gain, decimal=6) flux_adu = 10 flux_e_ = flux_adu * self.ccd_gain noise_e_ = self.data_e_.flux_noise(flux_e_) noise_adu = self.data_adu.flux_noise(flux_adu) npt.assert_almost_equal(noise_e_ / self.ccd_gain, noise_adu, decimal=8) def test_psf_type(self): assert self.data_adu._psf_type == 'GAUSSIAN' kwargs_observations = { 'exposure_time': 1, 'sky_brightness': 1, 'magnitude_zero_point': self.magnitude_zero_point, 'num_exposures': 1, 'seeing': 1, 'psf_type': 'PIXEL' } kwargs_data = util.merge_dicts(self.kwargs_instrument, kwargs_observations) data_pixel = SingleBand(data_count_unit='ADU', **kwargs_data) assert data_pixel._psf_type == 'PIXEL' kwargs_observations = { 'exposure_time': 1, 'sky_brightness': 1, 'magnitude_zero_point': self.magnitude_zero_point, 'num_exposures': 1, 'seeing': 1, 'psf_type': 'NONE' } kwargs_data = util.merge_dicts(self.kwargs_instrument, kwargs_observations) data_pixel = SingleBand(data_count_unit='ADU', **kwargs_data) assert data_pixel._psf_type == 'NONE'