def closeConnection(self):
if not self._mysql:
return
self._mysql.close()
MLAB.removeSqlDatabase(self._mysql)
self._mysql = None
def closeConnection(self):
if not self._mysql:
return
self._mysql.close()
MLAB.removeSqlDatabase(self._mysql)
self._mysql = None
def installOsiriXPlugin():
# Make sure OsiriX is running beforehand. Due to the modified environment of
# MeVisLab OsiriX may behave differently than usual when started from this
# environment...
if MLAB.macIsApplicationRunning('com.rossetantoine.osirix'):
MLAB.macOpenFileInApplication(os.path.join(ctx.package().binPath(),'PlugIns','OsiriXMeVisLabBridge.osirixplugin'), 'com.rossetantoine.osirix')
else:
MLAB.showInformation('OsiriX must be running to install the plugin. Please start OsiriX.', 'The plugin will be handed to OsiriX for installation. Click on the Install button again after launching OsiriX.', 'OsiriXBridge', ctx.window())
def installPlugin():
# Make sure OsiriX is running beforehand. Due to the modified environment of
# MeVisLab OsiriX may behave differently than usual when started from this
# environment...
if MLAB.macIsApplicationRunning('com.rossetantoine.osirix'):
MLAB.openFile(os.path.join(ctx.package().binPath(),'PlugIns','OsiriXMeVisLabBridge.osirixplugin'))
else:
MLAB.showInformation('OsiriX must be running to install the plugin. Please start OsiriX.', 'The plugin will be handed to OsiriX for installation. Click on the Install button again after launching OsiriX.', 'OsiriXBridge', ctx.window())
def filenameChanged(field=None):
filename = ctx.expandFilename(ctx.field("filename").stringValue())
if MLABFileManager.exists(filename):
if MLABFileManager.isDir(filename):
MLAB.logWarning("LocalAnalyzeLoad.filename - File is a directory (" + filename + ")")
else:
ctx.field("AnalyzeHeader.filename").setStringValue(filename)
else:
if not filename == "":
MLAB.logWarning("LocalAnalyzeLoad.filename - File does not exist (" + filename + ")")
ctx.field("AnalyzeHeader.filename").setStringValue("")
parseFile(filename)
def filenameChanged(field=None):
filename = ctx.expandFilename(ctx.field("filename").stringValue())
if MLABFileManager.exists(filename):
if MLABFileManager.isDir(filename):
MLAB.logWarning(
"LocalAnalyzeLoad.filename - File is a directory (" +
filename + ")")
else:
ctx.field("AnalyzeHeader.filename").setStringValue(filename)
else:
if not filename == "":
MLAB.logWarning(
"LocalAnalyzeLoad.filename - File does not exist (" +
filename + ")")
ctx.field("AnalyzeHeader.filename").setStringValue("")
parseFile(filename)
def tryUpdate():
"""Execute the CLI module, but don't warn about missing inputs (used
for autoUpdate). Returns error messages that can be displayed if
explicitly run (cf. update())."""
global execution
execution = CLIExecution()
execution.start()
if ctx.field('runInBackground_WIP').value:
_pollProcessStatus()
else:
while execution.isRunning():
MLAB.processEvents()
time.sleep(0.1)
ec = execution.wait()
if ec:
return execution.errorDescription
def openConnection(self,host,user,password,db):
if self._mysql and self._mysql.isOpen():
self.closeConnection()
self._mysql = MLAB.addSqlDatabase('Mysql')
self._mysql.setHostName(host)
self._mysql.setUserName(user)
self._mysql.setPassword(password)
self._mysql.setDatabaseName(db)
self._mysql.setPort(3306)
self._mysql.open()
valid = self._mysql.isOpen()
if not valid:
self.closeConnection()
def openConnection(self, host, user, password, db):
if self._mysql and self._mysql.isOpen():
self.closeConnection()
self._mysql = MLAB.addSqlDatabase('Mysql')
self._mysql.setHostName(host)
self._mysql.setUserName(user)
self._mysql.setPassword(password)
self._mysql.setDatabaseName(db)
self._mysql.setPort(3306)
self._mysql.open()
valid = self._mysql.isOpen()
if not valid:
self.closeConnection()
def openConnection(self, host, user, password, db):
if self._pgsql and self._pgsql.isOpen():
self.closeConnection()
self._pgsql = MLAB.addSqlDatabase('Postgres')
self._pgsql.setHostName(host)
self._pgsql.setUserName(user)
self._pgsql.setPassword(password)
self._pgsql.setDatabaseName(db)
self._pgsql.setPort(5432)
self._pgsql.open()
valid = self._pgsql.isOpen()
if not valid:
print("could not open")
self.closeConnection()
def openConnection(self,host,user,password,db):
if self._pgsql and self._pgsql.isOpen():
self.closeConnection()
self._pgsql = MLAB.addSqlDatabase('Postgres')
self._pgsql.setHostName(host)
self._pgsql.setUserName(user)
self._pgsql.setPassword(password)
self._pgsql.setDatabaseName(db)
self._pgsql.setPort(5432)
self._pgsql.open()
valid = self._pgsql.isOpen()
if not valid:
print("could not open")
self.closeConnection()
def processOnce():
commandList = ctx.field("commandList").value;
isVerbose = ctx.field("isVerbose").value;
isProcessEvents = ctx.field("isProcessEvents").value;
isProcessInventorQueue = ctx.field("isProcessInventorQueue").value;
sleep = ctx.field("sleep").value;
commands = commandList.split('\n')
for i in range(0, len(commands)):
command = commands[i]
if ( (command != '') and (command[0] != '#') ):
if (isVerbose):
MLAB.log("CommandBox ... " + command);
ctx.parent().field(command).touch();
if (isProcessEvents):
MLAB.processEvents();
if (isProcessInventorQueue):
MLAB.processInventorQueue();
MLAB.msleep(sleep);
def processOnce():
commandList = ctx.field("commandList").value
isVerbose = ctx.field("isVerbose").value
isProcessEvents = ctx.field("isProcessEvents").value
isProcessInventorQueue = ctx.field("isProcessInventorQueue").value
sleep = ctx.field("sleep").value
commands = commandList.split('\n')
for i in range(0, len(commands)):
command = commands[i]
if ((command != '') and (command[0] != '#')):
if (isVerbose):
MLAB.log("CommandBox ... " + command)
ctx.parent().field(command).touch()
if (isProcessEvents):
MLAB.processEvents()
if (isProcessInventorQueue):
MLAB.processInventorQueue()
MLAB.msleep(sleep)
def _executeScript(script):
tmp = MLABFileManager.getTmpDir()
if not tmp[-1] == "/":
tmp += "/"
now = datetime.datetime.now().strftime("%Y%m%d%H%M%S")
file = MLABFileManager.getUniqueFilename(tmp,now,".scp")
MLABFileManager.writeStringToFile(file,script)
winscp = ctx.expandFilename("$(LOCAL)/winscp416.exe")
cmd = "\"" + winscp + "\" /script=\"" + file + "\""
proc = MLAB.newProcess()
proc.addArgument(cmd)
proc.setStdOutHandler(ctx,"_procStdOut")
proc.setStdErrHandler(ctx,"_procStdErr")
proc.setExitedHandler(ctx,"_procFinished")
global _processes
_processes[proc] = file
proc.run()
def _executeScript(script):
tmp = MLABFileManager.getTmpDir()
if not tmp[-1] == "/":
tmp += "/"
now = datetime.datetime.now().strftime("%Y%m%d%H%M%S")
file = MLABFileManager.getUniqueFilename(tmp,now,".scp")
MLABFileManager.writeStringToFile(file,script)
winscp = ctx.expandFilename("$(LOCAL)/winscp416.exe")
cmd = "\"" + winscp + "\" /script=\"" + file + "\""
proc = MLAB.newProcess()
proc.addArgument(cmd)
proc.setStdOutHandler(ctx,"_procStdOut")
proc.setStdErrHandler(ctx,"_procStdErr")
proc.setExitedHandler(ctx,"_procFinished")
global _processes
_processes[proc] = file
proc.run()
def _procStdErr(proc): MLAB.log(proc.readStdErr())
def ShowEatDicomOptions():
MLAB.runCommandInConsole(MLABFileManager.getExecutable("eatDicom"), ["-help"], "", "", "Dicom Import Options Help", ctx.window());
def showGuide():
MLAB.openFile(
os.path.join(ctx.package().documentationPath(), 'Publish',
'OsiriXMeVisLabBridge.pdf'))
def SetDefaultEatDicomOptions():
ctx.field("eatDicomOptions").setStringValue(MLAB.variable("EatDicomOptions"));
def _procStdOut(proc): MLAB.log(proc.readStdOut())
def call():
success = False
ctx.field("callSucceeded").value = success
prog = ctx.field("executable").value
args = str(ctx.field("arguments").value).split()
workingdir = ctx.field("workingDirectory").value
g_Process = MLAB.newProcess()
#global g_Process
MLAB.processEvents(False)
MLAB.log(prog + " is started with the following options:")
MLAB.log(args)
if g_Process:
g_Process.kill()
if g_Process:
MLAB.deleteProcess(g_Process)
g_Process = MLAB.newProcess()
g_Process.clearArguments()
g_Process.addArgument(prog)
g_Process.addArguments(args)
g_Process.setWorkDir(workingdir)
if ctx.field("outputToLogWindow").value:
g_Process.setStdOutHandler(ctx, "processOut")
g_Process.setStdErrHandler(ctx, "processOut")
g_Process.setExitedHandler(ctx, "processExit")
g_Process.setUserInfo(prog)
g_Process.run()
g_Process.waitForLaunch()
if g_Process.isRunning():
MLAB.log(prog + " is running")
success = True
else:
MLAB.log(prog + " failed to start")
success = False
MLAB.processEvents(True)
if g_Process:
g_Process.waitForExit()
if g_Process:
MLAB.deleteProcess(g_Process)
ctx.field("callSucceeded").value = success
def _procStdErr(proc): MLAB.log(proc.readStdErr())
def SetDefaultEatDicomOptions():
ctx.field("eatDicomOptions").setStringValue(MLAB.variable("EatDicomOptions"))
def ShowEatDicomOptions():
MLAB.runCommandInConsole(MLABFileManager.getExecutable("eatDicom"), ["-help"], "", "", "Dicom Import Options Help", ctx.window())
def showPlugin(): MLAB.openFile(os.path.join(ctx.package().binPath(),'PlugIns'))
def showPlugin(): MLAB.openFile(os.path.join(ctx.package().binPath(),'PlugIns'))
def _procStdOut(proc): MLAB.log(proc.readStdOut())
def processExit(p):
MLAB.log("The following process has finished: " + p.userInfo())
