def test_FSL2Scheme_outputs(): output_map = dict(scheme=dict(), ) outputs = FSL2Scheme.output_spec() for key, metadata in output_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_FSL2Scheme_inputs(): input_map = dict( args=dict(argstr='%s', ), bscale=dict( argstr='-bscale %d', units='NA', ), bval_file=dict( argstr='-bvalfile %s', mandatory=True, position=2, ), bvec_file=dict( argstr='-bvecfile %s', mandatory=True, position=1, ), diffusiontime=dict( argstr='-diffusiontime %f', units='NA', ), environ=dict( nohash=True, usedefault=True, ), flipx=dict(argstr='-flipx', ), flipy=dict(argstr='-flipy', ), flipz=dict(argstr='-flipz', ), ignore_exception=dict( nohash=True, usedefault=True, ), interleave=dict(argstr='-interleave', ), numscans=dict( argstr='-numscans %d', units='NA', ), out_file=dict( argstr='> %s', genfile=True, position=-1, ), terminal_output=dict( mandatory=True, nohash=True, ), usegradmod=dict(argstr='-usegradmod', ), ) inputs = FSL2Scheme.input_spec() for key, metadata in input_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_FSL2Scheme_inputs(): input_map = dict(args=dict(argstr='%s', ), bscale=dict(argstr='-bscale %d', units='NA', ), bval_file=dict(argstr='-bvalfile %s', mandatory=True, position=2, ), bvec_file=dict(argstr='-bvecfile %s', mandatory=True, position=1, ), diffusiontime=dict(argstr='-diffusiontime %f', units='NA', ), environ=dict(nohash=True, usedefault=True, ), flipx=dict(argstr='-flipx', ), flipy=dict(argstr='-flipy', ), flipz=dict(argstr='-flipz', ), ignore_exception=dict(nohash=True, usedefault=True, ), interleave=dict(argstr='-interleave', ), numscans=dict(argstr='-numscans %d', units='NA', ), out_file=dict(argstr='> %s', genfile=True, position=-1, ), terminal_output=dict(mandatory=True, nohash=True, ), usegradmod=dict(argstr='-usegradmod', ), ) inputs = FSL2Scheme.input_spec() for key, metadata in input_map.items(): for metakey, value in metadata.items(): yield assert_equal, getattr(inputs.traits()[key], metakey), value