def test_FSL2Scheme_outputs():
output_map = dict(scheme=dict(), )
outputs = FSL2Scheme.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_FSL2Scheme_outputs():
output_map = dict(scheme=dict(),
)
outputs = FSL2Scheme.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_FSL2Scheme_inputs():
input_map = dict(
args=dict(argstr='%s', ),
bscale=dict(
argstr='-bscale %d',
units='NA',
),
bval_file=dict(
argstr='-bvalfile %s',
mandatory=True,
position=2,
),
bvec_file=dict(
argstr='-bvecfile %s',
mandatory=True,
position=1,
),
diffusiontime=dict(
argstr='-diffusiontime %f',
units='NA',
),
environ=dict(
nohash=True,
usedefault=True,
),
flipx=dict(argstr='-flipx', ),
flipy=dict(argstr='-flipy', ),
flipz=dict(argstr='-flipz', ),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
interleave=dict(argstr='-interleave', ),
numscans=dict(
argstr='-numscans %d',
units='NA',
),
out_file=dict(
argstr='> %s',
genfile=True,
position=-1,
),
terminal_output=dict(
mandatory=True,
nohash=True,
),
usegradmod=dict(argstr='-usegradmod', ),
)
inputs = FSL2Scheme.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_FSL2Scheme_inputs():
input_map = dict(args=dict(argstr='%s',
),
bscale=dict(argstr='-bscale %d',
units='NA',
),
bval_file=dict(argstr='-bvalfile %s',
mandatory=True,
position=2,
),
bvec_file=dict(argstr='-bvecfile %s',
mandatory=True,
position=1,
),
diffusiontime=dict(argstr='-diffusiontime %f',
units='NA',
),
environ=dict(nohash=True,
usedefault=True,
),
flipx=dict(argstr='-flipx',
),
flipy=dict(argstr='-flipy',
),
flipz=dict(argstr='-flipz',
),
ignore_exception=dict(nohash=True,
usedefault=True,
),
interleave=dict(argstr='-interleave',
),
numscans=dict(argstr='-numscans %d',
units='NA',
),
out_file=dict(argstr='> %s',
genfile=True,
position=-1,
),
terminal_output=dict(mandatory=True,
nohash=True,
),
usegradmod=dict(argstr='-usegradmod',
),
)
inputs = FSL2Scheme.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
