def test__get_cases(gemini_path): adapter = GeminiPlugin(db=gemini_path) individuals = adapter._get_individuals() case_ids = [case.case_id for case in adapter._get_cases(individuals)] assert set(case_ids) == set(['643594'])
def test__get_individuals(gemini_path): adapter = GeminiPlugin(db=gemini_path) ind_ids = [ind.ind_id for ind in adapter._get_individuals()] assert set(ind_ids) == set(['NA12877', 'NA12878', 'NA12882'])