コード例 #1
0
def update_locus_list_handler(request, locus_list_guid):
    locus_list = LocusList.objects.get(guid=locus_list_guid)
    check_object_permissions(locus_list,
                             request.user,
                             permission_level=CAN_EDIT)

    request_json = json.loads(request.body)

    genes_by_id, intervals, invalid_items = parse_locus_list_items(
        request_json)
    if invalid_items and not request_json.get('ignoreInvalidItems'):
        return create_json_response({'invalidLocusListItems': invalid_items},
                                    status=400,
                                    reason=INVALID_ITEMS_ERROR)

    update_model_from_json(locus_list, request_json, allow_unknown_keys=True)
    if genes_by_id is not None:
        _update_locus_list_items(locus_list, genes_by_id, intervals,
                                 request_json, request.user)

    return create_json_response({
        'locusListsByGuid': {
            locus_list.guid: get_json_for_locus_list(locus_list, request.user)
        },
        'genesById': genes_by_id or {},
    })
コード例 #2
0
def delete_locus_list_handler(request, locus_list_guid):
    locus_list = LocusList.objects.get(guid=locus_list_guid)
    check_object_permissions(locus_list,
                             request.user,
                             permission_level=CAN_EDIT)

    delete_seqr_model(locus_list)
    return create_json_response({'locusListsByGuid': {locus_list_guid: None}})
コード例 #3
0
ファイル: locus_list_api.py プロジェクト: macarthur-lab/seqr
def update_locus_list_handler(request, locus_list_guid):
    locus_list = LocusList.objects.get(guid=locus_list_guid)
    check_object_permissions(locus_list, request.user, permission_level=CAN_EDIT)

    request_json = json.loads(request.body)

    genes_by_id, intervals, invalid_items = parse_locus_list_items(request_json)
    if invalid_items and not request_json.get('ignoreInvalidItems'):
        return create_json_response({'invalidLocusListItems': invalid_items}, status=400, reason=INVALID_ITEMS_ERROR)

    update_model_from_json(locus_list, request_json, allow_unknown_keys=True)
    if genes_by_id is not None:
        _update_locus_list_items(locus_list, genes_by_id, intervals, request_json, request.user)

    return create_json_response({
        'locusListsByGuid': {locus_list.guid: get_json_for_locus_list(locus_list, request.user)},
        'genesById': genes_by_id or {},
    })
コード例 #4
0
ファイル: locus_list_api.py プロジェクト: macarthur-lab/seqr
def delete_locus_list_handler(request, locus_list_guid):
    locus_list = LocusList.objects.get(guid=locus_list_guid)
    check_object_permissions(locus_list, request.user, permission_level=CAN_EDIT)

    delete_seqr_model(locus_list)
    return create_json_response({'locusListsByGuid': {locus_list_guid: None}})