Python Lineage.add_snpsの例

コード例 #1

def test_addSnps_emptyFileSnpsRemainEmpty():
    lineage_variant_file = TEST_CASE_DIR / "empty.tsv"
    lineage = Lineage()
    lineage.add_snps(lineage_variant_file)

    actual = lineage.snps
    expected = dict()

    assert actual == expected

コード例 #2

def test_addSnps_realFileSnpsContainAllEntries():
    lineage_variant_file = TEST_CASE_DIR / "test_lineage.tsv"
    lineage = Lineage()
    lineage.add_snps(lineage_variant_file)

    actual = lineage.snps
    expected = {
        1011511: "C",
        1022003: "C",
        1028217: "A",
        1034758: "T",
        1071966: "G"
    }

    assert actual == expected