# If we are only claculation translation, we swich on translation calculation if o.onlyTrans and not o.translation: o.translation = True # Split the comma seperated list into a list of integers if args['removeModels'] != "": o.remove = list(map(int, args['removeModels'].split(','))) else: o.remove = [] o.fragSize = fragSize o.verbose = args['verbose'] o.keepTemp = args['keepTempFiles'] o.sdfPartial = sdf_partial_fragments if not o.verbose: o.verbose = 0 # Checking paths if o.inData == "": checkPathExists(o.exePath) checkPathExists(args['in']) if not o.skipREMO: checkPathExists(path.join(o.REMOPath, 'REMO.pl')) checkPathExists(o.tmpPath) else: checkPathExists(o.inData)