cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2'] cl.OA2pco2_startDatetime = startdate cl.OA2pco2_endDatetime = enddate # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation'] cl.OA2o2_startDatetime = startdate cl.OA2o2_endDatetime = enddate # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = ['fluor'] cl.OA2fl_startDatetime = startdate cl.OA2fl_endDatetime = enddate ###################################################################################################### # SubSample data files from /mbari/BOG_Archive/ReportsForSTOQS/CN13ID copied to local BOG_Data/CN13ID ###################################################################################################### cl.subsample_csv_base = os.path.join( os.path.dirname(os.path.realpath(__file__)), 'BOG_Data/CN13ID') cl.subsample_csv_files = [ 'STOQS_CN13ID_CARBON_GFF.csv', 'STOQS_CN13ID_CHL_1U.csv', 'STOQS_CN13ID_CHL_5U.csv', 'STOQS_CN13ID_CHLA.csv', 'STOQS_CN13ID_CHL_GFF.csv', 'STOQS_CN13ID_PHAEO_1U.csv', 'STOQS_CN13ID_PHAEO_5U.csv', 'STOQS_CN13ID_PHAEO_GFF.csv',
cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2' ] cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ] cl.OA2o2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2o2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = [ 'fluor' ] cl.OA2fl_startDatetime = datetime.datetime(*startdate[:]) cl.OA2fl_endDatetime = datetime.datetime(*enddate[:]) ####################################################################################### # DRIFTERS ####################################################################################### # Stella 203 cl.stella203_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/' cl.stella203_parms = [ 'TEMP', 'pH' ] cl.stella203_files = [ 'stella203.nc', ] # MBARI ESPs Mack and Bruce cl.espmack_base = cl.dodsBase + 'CANON_september2013/Platforms/Moorings/ESP_Mack/NetCDF/' cl.espmack_parms = [ 'TEMP', 'PSAL', 'chl', 'chlini', 'no3' ]
cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2' ] cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ] cl.OA2o2_startDatetime = datetime.datetime(*startdate[:]) cl.OA2o2_endDatetime = datetime.datetime(*enddate[:]) # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = [ 'fluor' ] cl.OA2fl_startDatetime = datetime.datetime(*startdate[:]) cl.OA2fl_endDatetime = datetime.datetime(*enddate[:]) ################################################################################################################### # Execute the load cl.process_command_line() if cl.args.test: cl.loadOA1ctd(stride=1) cl.loadOA1met(stride=1) cl.loadOA1pH(stride=1) cl.loadOA1pco2(stride=1) cl.loadOA1fl(stride=1) cl.loadOA1o2(stride=1) cl.loadOA2ctd(stride=1) cl.loadOA2met(stride=1) cl.loadOA2pH(stride=1)
cl.OA2pco2_files = ['OA2_pco2_2013.nc'] cl.OA2pco2_parms = ['pCO2' ] cl.OA2pco2_startDatetime = startdate cl.OA2pco2_endDatetime = enddate # Mooring OA2 O2 cl.OA2o2_base = cl.dodsBase + cl.oaDir cl.OA2o2_files = ['OA2_o2_2013.nc'] cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ] cl.OA2o2_startDatetime = startdate cl.OA2o2_endDatetime = enddate # Mooring OA2 Fluorescence cl.OA2fl_base = cl.dodsBase + cl.oaDir cl.OA2fl_files = ['OA2_fl_2013.nc'] cl.OA2fl_parms = [ 'fluor' ] cl.OA2fl_startDatetime = startdate cl.OA2fl_endDatetime = enddate ####################################################################################### # DRIFTERS ####################################################################################### # Stella drifters, requires input file stella_load.csv with the names of the cl.stella_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/' cl.stella_parms = [ 'TEMP', 'pH' ] cl.stella_files = [ 'stella202_data.nc', 'stella203_data.nc', 'stella204_data.nc', 'stella205_data.nc' ] ####################################################################################### # ESP MOORINGS