cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2']
cl.OA2pco2_startDatetime = startdate
cl.OA2pco2_endDatetime = enddate
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation']
cl.OA2o2_startDatetime = startdate
cl.OA2o2_endDatetime = enddate
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = ['fluor']
cl.OA2fl_startDatetime = startdate
cl.OA2fl_endDatetime = enddate
######################################################################################################
# SubSample data files from /mbari/BOG_Archive/ReportsForSTOQS/CN13ID copied to local BOG_Data/CN13ID
######################################################################################################
cl.subsample_csv_base = os.path.join(
os.path.dirname(os.path.realpath(__file__)), 'BOG_Data/CN13ID')
cl.subsample_csv_files = [
'STOQS_CN13ID_CARBON_GFF.csv',
'STOQS_CN13ID_CHL_1U.csv',
'STOQS_CN13ID_CHL_5U.csv',
'STOQS_CN13ID_CHLA.csv',
'STOQS_CN13ID_CHL_GFF.csv',
'STOQS_CN13ID_PHAEO_1U.csv',
'STOQS_CN13ID_PHAEO_5U.csv',
'STOQS_CN13ID_PHAEO_GFF.csv',
cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2' ]
cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ]
cl.OA2o2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2o2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = [ 'fluor' ]
cl.OA2fl_startDatetime = datetime.datetime(*startdate[:])
cl.OA2fl_endDatetime = datetime.datetime(*enddate[:])
#######################################################################################
# DRIFTERS
#######################################################################################
# Stella 203
cl.stella203_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/'
cl.stella203_parms = [ 'TEMP', 'pH' ]
cl.stella203_files = [
'stella203.nc',
]
# MBARI ESPs Mack and Bruce
cl.espmack_base = cl.dodsBase + 'CANON_september2013/Platforms/Moorings/ESP_Mack/NetCDF/'
cl.espmack_parms = [ 'TEMP', 'PSAL', 'chl', 'chlini', 'no3' ]
cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2' ]
cl.OA2pco2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2pco2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ]
cl.OA2o2_startDatetime = datetime.datetime(*startdate[:])
cl.OA2o2_endDatetime = datetime.datetime(*enddate[:])
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = [ 'fluor' ]
cl.OA2fl_startDatetime = datetime.datetime(*startdate[:])
cl.OA2fl_endDatetime = datetime.datetime(*enddate[:])
###################################################################################################################
# Execute the load
cl.process_command_line()
if cl.args.test:
cl.loadOA1ctd(stride=1)
cl.loadOA1met(stride=1)
cl.loadOA1pH(stride=1)
cl.loadOA1pco2(stride=1)
cl.loadOA1fl(stride=1)
cl.loadOA1o2(stride=1)
cl.loadOA2ctd(stride=1)
cl.loadOA2met(stride=1)
cl.loadOA2pH(stride=1)
cl.OA2pco2_files = ['OA2_pco2_2013.nc']
cl.OA2pco2_parms = ['pCO2' ]
cl.OA2pco2_startDatetime = startdate
cl.OA2pco2_endDatetime = enddate
# Mooring OA2 O2
cl.OA2o2_base = cl.dodsBase + cl.oaDir
cl.OA2o2_files = ['OA2_o2_2013.nc']
cl.OA2o2_parms = ['oxygen', 'oxygen_saturation' ]
cl.OA2o2_startDatetime = startdate
cl.OA2o2_endDatetime = enddate
# Mooring OA2 Fluorescence
cl.OA2fl_base = cl.dodsBase + cl.oaDir
cl.OA2fl_files = ['OA2_fl_2013.nc']
cl.OA2fl_parms = [ 'fluor' ]
cl.OA2fl_startDatetime = startdate
cl.OA2fl_endDatetime = enddate
#######################################################################################
# DRIFTERS
#######################################################################################
# Stella drifters, requires input file stella_load.csv with the names of the
cl.stella_base = cl.dodsBase + 'CANON_september2013/Platforms/Drifters/Stella_1/'
cl.stella_parms = [ 'TEMP', 'pH' ]
cl.stella_files = [
'stella202_data.nc',
'stella203_data.nc', 'stella204_data.nc', 'stella205_data.nc'
]
#######################################################################################
# ESP MOORINGS
