def test_sub_coordinates(self):
"""
load solvated trajectory into universe with unsolvated protein.
"""
self.udry.load_new(self.XDR_SUB_SOL, sub=self.sub)
ts = self.udry.atoms.ts
assert_timestep_almost_equal(ts, self.ts)
def test_sub_coordinates(self):
"""
load solvated trajectory into universe with unsolvated protein.
"""
self.udry.load_new(self.XDR_SUB_SOL, sub=self.sub)
ts = self.udry.atoms.ts
assert_timestep_almost_equal(ts, self.ts)
def test_sub_coordinates(self, atoms):
"""
load solvated trajectory into universe with unsolvated protein.
"""
udry = mda.Universe(PDB_sub_dry)
udry.load_new(self.XDR_SUB_SOL, sub=atoms.indices)
ts = udry.atoms.ts
assert_timestep_almost_equal(ts, atoms.ts)
def test_sub_coordinates(self, atoms):
"""
load solvated trajectory into universe with unsolvated protein.
"""
udry = mda.Universe(PDB_sub_dry)
udry.load_new(self.XDR_SUB_SOL, sub=atoms.indices)
ts = udry.atoms.ts
assert_timestep_almost_equal(ts, atoms.ts)