def setup(params, *args, **kw): matlab_setup(['MicrotubuleTracker', '-a', 'mt_track_config.xml'], params=params) docker_setup('microtubuletracker', 'MicrotubuleTracker', 'matlab_runtime', params=params)
def setup(params, *args, **kw): python_setup("RootTipMulti.py", params) matlab_setup('matlab/maizeG.m', bisque_deps=False, params=params) docker_setup('roottipmulti', 'RootTipMulti', 'matlab_runtime', params=params)
def setup(params, *args, **kw): ensure_matlab(params) #mex_compile(['vrl_gc.cpp'], where='vrl_tools/maxflow_kolmogorov') matlab_setup(['GraphcutSegmentation'], params=params) docker_setup('graphcut', 'GraphcutSegmentation', 'matlab_runtime', params=params)
def setup(params, *args, **kw): ensure_matlab(params) mex_compile(['vrl_gc.cpp'], where='vrl_tools/maxflow_kolmogorov') matlab_setup(['ImageMatting', '-a', 'vrl_tools'], params=params) docker_setup('imagematting', 'ImageMatting', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('WatershedSegmentation', params=params) docker_setup('watershedsegmentation', 'WatershedSegmentation', 'matlab_runtime', params=params)
def setup(*args, **kw): python_setup('RootTip.py', params=params) matlab_setup('matlab/araGT.m', bisque_deps=False, params=params) docker_setup('roottip', "RootTip", "matlab_runtime", params=params)
def setup(params, *args, **kw): matlab_setup(['Phidias.m', '-a', 'phenotype_descriptors'], params=params) docker_setup('phidiasanalyze', 'Phidias', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('PhidiasModel.m', params=params) docker_setup('phidiasmodel', 'Phidiasmodel', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('PhidiasAnnotate.m', params=params) docker_setup('phidiasannotate', 'PhidiasAnnotate', 'matlab_runtime', params=params)
def setup(params, *args, **kw): python_setup('SeedSize.py', params=params) matlab_setup('matlab/seedSize', bisque_deps=False, params=params) docker_setup('seedsize', 'SeedSize', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('PHFDetector', params=params) docker_setup('phfdetector', 'PHFDetector', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('NuclearDetector3D', params=params) docker_setup('n3d', 'NuclearDetector3D', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('NuclearFilter', params=params) docker_setup('nuclearfilter', 'NuclearFilter', 'matlab_runtime', params=params)
def setup(params, *args, **kw): ensure_binary('svm-predict') ensure_binary('svm-scale') return matlab_setup('BotanicamTrainer', params=params)
def setup(params, *args, **kw): matlab_setup('PlantcellTracking', params=params) docker_setup('plantcelltracking', 'PlantcellTracking', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('FluorescentCavities', params=params) docker_setup('fluorescentcavities', 'FluorescentCavities', 'matlab_runtime', params=params)
def setup(params, *args, **kw): ensure_matlab(params) mex_compile(['vrl_gc.cpp'], where='vrl_tools/maxflow_kolmogorov') matlab_setup(['PlanteomeSegmenter', '-a', 'vrl_tools'], params=params) docker_setup('imagematting', 'PlanteomeSegmenter', 'matlab_runtime', params=params)
def setup(params, *args, **kw): matlab_setup('PlantcellSegment', params=params) matlab_setup('plantcellsegment', 'PlantcellSegment', 'matlab_runtime', params=params)