def testCAL_Gk_Neuron(self): data = np.c_[self.tseries, self.gk] try: err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.01) except IOError: print('Could not find NRN data')
def testCaT_Vm_Neuron(self): data = np.c_[self.tseries, self.vm] try: err = compare_channel_data(data, self.channelname, 'Vm', 'neuron', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.01) except IOError: print('Could not find NRN data')
def testCaPool_Ca_Neuron(self): print(self.ca.shape) data = np.c_[self.tseries, self.ca] try: err = compare_channel_data(data, self.poolname, 'Ca', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.01) except IOError: print('Could not find NRN data')
def testNaF_TCR_Gk_Neuron(self): print('Testing NEURON Gk ...', end='') data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime / 10.0, simtime), plot=True) self.assertLess(err, 0.05) print('OK')
def testCaT_Vm_Neuron(self): data = np.c_[self.tseries, self.vm] try: err = compare_channel_data(data, self.channelname, 'Vm', 'neuron', x_range=(simtime / 10.0, simtime)) self.assertLess(err, 0.01) except IOError: print('Could not find NRN data')
def testAR_Gk_Neuron(self): data = np.c_[self.tseries, self.gk] try: err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime / 10.0, simtime), plot=True) self.assertLess(err, 0.01) except IOError: print('Could not find NRN data')
def testNaF_TCR_Vm_Neuron(self): print 'Testing NEURON Vm ...', data = np.c_[self.tseries, self.vm] err = compare_channel_data(data, self.channelname, 'Vm', 'neuron', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.01) print 'OK'
def testNaF_TCR_Gk_Moose(self): print 'Testing MOOSE Gk ...', err = compare_channel_data(self.gk, TestNaF_TCR.channelname, 'Gk', 'moose', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.05) print 'OK'
def testNaF_TCR_Vm_Moose(self): print 'Testing MOOSE Vm ...', err = compare_channel_data(self.vm, TestNaF_TCR.channelname, 'Vm', 'moose', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.01) print 'OK'
def testNaF_Gk_Neuron(self): print 'Testing NEURON Gk ...', data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.05) print 'OK'
def testNaPF_TCR_Gk_Neuron(self): print('Testing NEURON Gk ...', end='') data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.05) print('OK')
def testNaF_TCR_Gk_Moose(self): print "Testing MOOSE Gk ...", err = compare_channel_data(self.gk, TestNaF_TCR.channelname, "Gk", "moose", x_range=(simtime / 10.0, simtime)) self.assertLess(err, 0.05) print "OK"
def testNaPF_TCR_Vm_Neuron(self): print "Testing NEURON Vm ...", data = np.c_[self.tseries, self.vm] err = compare_channel_data(data, self.channelname, "Vm", "neuron", x_range=(simtime / 10.0, simtime)) self.assertLess(err, 0.01) print "OK"
def testAR_Vm_Neuron(self): data = np.c_[self.tseries, self.vm] err = compare_channel_data(data, self.channelname, 'Vm', 'neuron', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.01)
def testCaT_Vm_Neuron(self): data = np.c_[self.tseries, self.vm] err = compare_channel_data(data, self.channelname, 'Vm', 'neuron', x_range=(simtime/10.0, simtime)) self.assertLess(err, 0.01)
def testKA_Gk_Neuron(self): data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', plot=True) self.assertLess(err, 0.01)
def testCaPool_Ca_Neuron(self): print self.ca.shape data = np.c_[self.tseries, self.ca] err = compare_channel_data(data, self.poolname, 'Ca', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.01)
def testNaF_Gk_Neuron(self): print "Testing NEURON Gk ...", data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, "Gk", "neuron", x_range=(simtime / 10.0, simtime)) self.assertLess(err, 0.05) print "OK"
def testCaT_Gk_Neuron(self): data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.01)
def testNaF_TCR_Vm_Moose(self): print "Testing MOOSE Vm ...", err = compare_channel_data(self.vm, TestNaF_TCR.channelname, "Vm", "moose", x_range=(simtime / 10.0, simtime)) self.assertLess(err, 0.01) print "OK"
def testAR_Gk_Neuron(self): data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, 'Gk', 'neuron', x_range=(simtime/10.0, simtime), plot=True) self.assertLess(err, 0.01)
def testNaPF_TCR_Gk_Neuron(self): print("Testing NEURON Gk ...", end="") data = np.c_[self.tseries, self.gk] err = compare_channel_data(data, self.channelname, "Gk", "neuron", x_range=(simtime / 10.0, simtime), plot=True) self.assertLess(err, 0.05) print("OK")