def _install_tools(env, tools_conf=None):
"""
Install tools needed for Galaxy along with tool configuration
directories needed by Galaxy.
"""
if not tools_conf:
tools_conf = _load_tools_conf(env)
if _read_boolean(env, "galaxy_install_dependencies", False):
# Need to ensure the install dir exists and is owned by env.galaxy_user
_setup_install_dir(env)
_install_applications(env, tools_conf)
if _read_boolean(env, "galaxy_install_r_packages", False):
_install_r_packages(tools_conf)
def _install_tools(env, tools_conf=None):
"""
Install tools needed for Galaxy along with tool configuration
directories needed by Galaxy.
"""
if not tools_conf:
tools_conf = _load_tools_conf(env)
if _read_boolean(env, "galaxy_install_dependencies", False):
# Need to ensure the install dir exists and is owned by env.galaxy_user
_setup_install_dir(env)
_install_applications(env, tools_conf)
if _read_boolean(env, "galaxy_install_r_packages", False):
_install_r_packages(tools_conf)